Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Mir124a-1-201ENSMUST00000083663 85 ntBASIC-3.32□□□□□ -2.94
Smarce1O54941 Snord58b-201ENSMUST00000082937 66 ntBASIC-3.33□□□□□ -2.94
Smarce1O54941 Gm22301-201ENSMUST00000082656 107 ntBASIC-3.35□□□□□ -2.95
Smarce1O54941 Mir664-201ENSMUST00000196796 69 ntBASIC-3.4□□□□□ -2.95
Smarce1O54941 n-R5s218-201ENSMUST00000122583 109 ntBASIC-3.46□□□□□ -2.96
Smarce1O54941 Gm25867-201ENSMUST00000158254 103 ntBASIC-3.47□□□□□ -2.96
Smarce1O54941 Gm22550-201ENSMUST00000179774 107 ntBASIC-3.47□□□□□ -2.96
Smarce1O54941 Gm22060-201ENSMUST00000082558 107 ntBASIC-3.47□□□□□ -2.96
Smarce1O54941 Gm26259-201ENSMUST00000104778 97 ntBASIC-3.49□□□□□ -2.97
Smarce1O54941 Gm26008-201ENSMUST00000158797 99 ntBASIC-3.52□□□□□ -2.97
Smarce1O54941 Mir466b-2-201ENSMUST00000103778 82 ntBASIC-3.64□□□□□ -2.99
Smarce1O54941 Gm24387-201ENSMUST00000104625 90 ntBASIC-3.69□□□□□ -3
Smarce1O54941 Gm25132-201ENSMUST00000082652 107 ntBASIC-3.71□□□□□ -3
Smarce1O54941 Gm24194-201ENSMUST00000116805 90 ntBASIC-3.8□□□□□ -3.02
Smarce1O54941 Gm27671-201ENSMUST00000183739 66 ntBASIC-3.83□□□□□ -3.02
Smarce1O54941 Mir7681-201ENSMUST00000184834 72 ntBASIC-3.83□□□□□ -3.02
Smarce1O54941 Gm23210-201ENSMUST00000158668 98 ntBASIC-3.86□□□□□ -3.03
Smarce1O54941 Gm26306-201ENSMUST00000157773 119 ntBASIC-3.87□□□□□ -3.03
Smarce1O54941 Mir669m-2-201ENSMUST00000158355 98 ntBASIC-3.88□□□□□ -3.03
Smarce1O54941 Gm44303-201ENSMUST00000196348 83 ntBASIC-3.95□□□□□ -3.04
Smarce1O54941 Gm25521-201ENSMUST00000158393 108 ntBASIC-4.13□□□□□ -3.07
Smarce1O54941 Gm25254-201ENSMUST00000157239 104 ntBASIC-4.26□□□□□ -3.09
Smarce1O54941 n-R5s214-201ENSMUST00000122494 121 ntBASIC-4.3□□□□□ -3.1
Smarce1O54941 Gm20473-201ENSMUST00000173064 112 ntBASIC-4.3□□□□□ -3.1
Smarce1O54941 Gm25039-201ENSMUST00000082933 107 ntBASIC-4.43□□□□□ -3.12
Smarce1O54941 Gm24531-201ENSMUST00000157945 100 ntBASIC-4.44□□□□□ -3.12
Smarce1O54941 Gm25049-201ENSMUST00000158597 73 ntBASIC-4.47□□□□□ -3.13
Smarce1O54941 Gm23248-201ENSMUST00000083367 108 ntBASIC-4.95□□□□□ -3.2
Smarce1O54941 Gm22593-201ENSMUST00000104245 109 ntBASIC-4.96□□□□□ -3.2
Smarce1O54941 AC160976.1-201ENSMUST00000215092 148 ntBASIC-4.96□□□□□ -3.2
Smarce1O54941 Gm25886-201ENSMUST00000157780 114 ntBASIC-5.62□□□□□ -3.31
Smarce1O54941 Gm23125-201ENSMUST00000157651 106 ntBASIC-6.05□□□□□ -3.38
Retrieved 32 of 76,532 protein–RNA pairs in 25.1 ms