Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Gm26008-201ENSMUST00000158797 99 ntBASIC-3.59□□□□□ -2.98
Trbv1A0A0B4J1G7 Gm26306-201ENSMUST00000157773 119 ntBASIC-3.63□□□□□ -2.99
Trbv1A0A0B4J1G7 Gm22071-201ENSMUST00000116857 83 ntBASIC-3.64□□□□□ -2.99
Trbv1A0A0B4J1G7 Mir7681-201ENSMUST00000184834 72 ntBASIC-3.67□□□□□ -3
Trbv1A0A0B4J1G7 Gm23676-201ENSMUST00000157314 105 ntBASIC-3.7□□□□□ -3
Trbv1A0A0B4J1G7 Gm26259-201ENSMUST00000104778 97 ntBASIC-3.73□□□□□ -3.01
Trbv1A0A0B4J1G7 Gm25132-201ENSMUST00000082652 107 ntBASIC-3.73□□□□□ -3.01
Trbv1A0A0B4J1G7 Gm24194-201ENSMUST00000116805 90 ntBASIC-3.75□□□□□ -3.01
Trbv1A0A0B4J1G7 Gm25045-201ENSMUST00000122670 99 ntBASIC-3.78□□□□□ -3.01
Trbv1A0A0B4J1G7 Gm22540-201ENSMUST00000158168 117 ntBASIC-3.8□□□□□ -3.02
Trbv1A0A0B4J1G7 Mir669m-2-201ENSMUST00000158355 98 ntBASIC-3.8□□□□□ -3.02
Trbv1A0A0B4J1G7 Gm44303-201ENSMUST00000196348 83 ntBASIC-3.83□□□□□ -3.02
Trbv1A0A0B4J1G7 Gm25950-201ENSMUST00000175331 100 ntBASIC-3.95□□□□□ -3.04
Trbv1A0A0B4J1G7 Gm25521-201ENSMUST00000158393 108 ntBASIC-3.96□□□□□ -3.04
Trbv1A0A0B4J1G7 n-R5s155-201ENSMUST00000122531 113 ntBASIC-3.97□□□□□ -3.04
Trbv1A0A0B4J1G7 Gm27671-201ENSMUST00000183739 66 ntBASIC-3.98□□□□□ -3.05
Trbv1A0A0B4J1G7 Gm22069-201ENSMUST00000179911 107 ntBASIC-4.14□□□□□ -3.07
Trbv1A0A0B4J1G7 n-R5s218-201ENSMUST00000122583 109 ntBASIC-4.2□□□□□ -3.08
Trbv1A0A0B4J1G7 Gm25254-201ENSMUST00000157239 104 ntBASIC-4.2□□□□□ -3.08
Trbv1A0A0B4J1G7 Gm20473-201ENSMUST00000173064 112 ntBASIC-4.23□□□□□ -3.09
Trbv1A0A0B4J1G7 Gm25049-201ENSMUST00000158597 73 ntBASIC-4.24□□□□□ -3.09
Trbv1A0A0B4J1G7 Gm22943-201ENSMUST00000158564 76 ntBASIC-4.32□□□□□ -3.1
Trbv1A0A0B4J1G7 Gm23210-201ENSMUST00000158668 98 ntBASIC-4.32□□□□□ -3.1
Trbv1A0A0B4J1G7 Gm27645-201ENSMUST00000183348 77 ntBASIC-4.51□□□□□ -3.13
Trbv1A0A0B4J1G7 Gm24531-201ENSMUST00000157945 100 ntBASIC-4.66□□□□□ -3.16
Trbv1A0A0B4J1G7 Gm25039-201ENSMUST00000082933 107 ntBASIC-4.74□□□□□ -3.17
Trbv1A0A0B4J1G7 Gm22593-201ENSMUST00000104245 109 ntBASIC-4.95□□□□□ -3.2
Trbv1A0A0B4J1G7 n-R5s214-201ENSMUST00000122494 121 ntBASIC-5.01□□□□□ -3.21
Trbv1A0A0B4J1G7 Gm23248-201ENSMUST00000083367 108 ntBASIC-5.07□□□□□ -3.22
Trbv1A0A0B4J1G7 AC160976.1-201ENSMUST00000215092 148 ntBASIC-5.4□□□□□ -3.27
Trbv1A0A0B4J1G7 Gm23125-201ENSMUST00000157651 106 ntBASIC-5.79□□□□□ -3.34
Trbv1A0A0B4J1G7 Gm25886-201ENSMUST00000157780 114 ntBASIC-5.8□□□□□ -3.34
Retrieved 32 of 76,532 protein–RNA pairs in 245.6 ms