Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Gm22540-201ENSMUST00000158168 117 ntBASIC-2.65□□□□□ -2.83
Ighv1-42A0A0A6YY38 Gm26008-201ENSMUST00000158797 99 ntBASIC-2.65□□□□□ -2.83
Ighv1-42A0A0A6YY38 Gm25950-201ENSMUST00000175331 100 ntBASIC-2.68□□□□□ -2.84
Ighv1-42A0A0A6YY38 Gm25132-201ENSMUST00000082652 107 ntBASIC-2.69□□□□□ -2.84
Ighv1-42A0A0A6YY38 Mir669m-2-201ENSMUST00000158355 98 ntBASIC-2.7□□□□□ -2.84
Ighv1-42A0A0A6YY38 Mir2136-201ENSMUST00000158781 75 ntBASIC-2.7□□□□□ -2.84
Ighv1-42A0A0A6YY38 Gm25297-201ENSMUST00000175490 67 ntBASIC-2.7□□□□□ -2.84
Ighv1-42A0A0A6YY38 Gm44303-201ENSMUST00000196348 83 ntBASIC-2.7□□□□□ -2.84
Ighv1-42A0A0A6YY38 Mir1912-201ENSMUST00000175298 87 ntBASIC-2.73□□□□□ -2.85
Ighv1-42A0A0A6YY38 Gm24194-201ENSMUST00000116805 90 ntBASIC-2.74□□□□□ -2.85
Ighv1-42A0A0A6YY38 Gm22069-201ENSMUST00000179911 107 ntBASIC-2.75□□□□□ -2.85
Ighv1-42A0A0A6YY38 Mir351-201ENSMUST00000083569 99 ntBASIC-2.75□□□□□ -2.85
Ighv1-42A0A0A6YY38 Gm22943-201ENSMUST00000158564 76 ntBASIC-2.85□□□□□ -2.87
Ighv1-42A0A0A6YY38 Gm27645-201ENSMUST00000183348 77 ntBASIC-2.87□□□□□ -2.87
Ighv1-42A0A0A6YY38 Gm27671-201ENSMUST00000183739 66 ntBASIC-2.9□□□□□ -2.87
Ighv1-42A0A0A6YY38 Gm23676-201ENSMUST00000157314 105 ntBASIC-2.94□□□□□ -2.88
Ighv1-42A0A0A6YY38 Gm25521-201ENSMUST00000158393 108 ntBASIC-2.97□□□□□ -2.88
Ighv1-42A0A0A6YY38 Gm25254-201ENSMUST00000157239 104 ntBASIC-2.99□□□□□ -2.89
Ighv1-42A0A0A6YY38 n-R5s218-201ENSMUST00000122583 109 ntBASIC-3.01□□□□□ -2.89
Ighv1-42A0A0A6YY38 Gm25905-201ENSMUST00000158490 101 ntBASIC-3.04□□□□□ -2.9
Ighv1-42A0A0A6YY38 Gm20473-201ENSMUST00000173064 112 ntBASIC-3.06□□□□□ -2.9
Ighv1-42A0A0A6YY38 Gm25049-201ENSMUST00000158597 73 ntBASIC-3.09□□□□□ -2.9
Ighv1-42A0A0A6YY38 Gm23210-201ENSMUST00000158668 98 ntBASIC-3.1□□□□□ -2.91
Ighv1-42A0A0A6YY38 Gm24531-201ENSMUST00000157945 100 ntBASIC-3.19□□□□□ -2.92
Ighv1-42A0A0A6YY38 n-R5s155-201ENSMUST00000122531 113 ntBASIC-3.5□□□□□ -2.97
Ighv1-42A0A0A6YY38 Gm25039-201ENSMUST00000082933 107 ntBASIC-3.52□□□□□ -2.97
Ighv1-42A0A0A6YY38 Gm22593-201ENSMUST00000104245 109 ntBASIC-3.53□□□□□ -2.97
Ighv1-42A0A0A6YY38 n-R5s214-201ENSMUST00000122494 121 ntBASIC-3.65□□□□□ -2.99
Ighv1-42A0A0A6YY38 Gm23248-201ENSMUST00000083367 108 ntBASIC-3.72□□□□□ -3
Ighv1-42A0A0A6YY38 AC160976.1-201ENSMUST00000215092 148 ntBASIC-3.74□□□□□ -3.01
Ighv1-42A0A0A6YY38 Gm25886-201ENSMUST00000157780 114 ntBASIC-4.08□□□□□ -3.06
Ighv1-42A0A0A6YY38 Gm23125-201ENSMUST00000157651 106 ntBASIC-4.1□□□□□ -3.07
Retrieved 32 of 76,532 protein–RNA pairs in 7.3 ms