Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm22069-201ENSMUST00000179911 107 ntBASIC-1.71□□□□□ -2.68
H2afb1S4R1E0 Gm27366-201ENSMUST00000184967 108 ntBASIC-1.71□□□□□ -2.68
H2afb1S4R1E0 Gm22879-201ENSMUST00000082895 74 ntBASIC-1.71□□□□□ -2.68
H2afb1S4R1E0 Mir539-201ENSMUST00000102109 74 ntBASIC-1.72□□□□□ -2.68
H2afb1S4R1E0 Snord8-201ENSMUST00000175303 110 ntBASIC-1.72□□□□□ -2.68
H2afb1S4R1E0 Gm22783-201ENSMUST00000104089 107 ntBASIC-1.73□□□□□ -2.69
H2afb1S4R1E0 Gm24710-201ENSMUST00000175235 101 ntBASIC-1.73□□□□□ -2.69
H2afb1S4R1E0 Gm24135-201ENSMUST00000179085 101 ntBASIC-1.73□□□□□ -2.69
H2afb1S4R1E0 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.74□□□□□ -2.69
H2afb1S4R1E0 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.74□□□□□ -2.69
H2afb1S4R1E0 Gm22540-201ENSMUST00000158168 117 ntBASIC-1.78□□□□□ -2.69
H2afb1S4R1E0 Mir466f-1-201ENSMUST00000104779 94 ntBASIC-1.79□□□□□ -2.7
H2afb1S4R1E0 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.8□□□□□ -2.7
H2afb1S4R1E0 Gm26472-201ENSMUST00000116760 83 ntBASIC-1.82□□□□□ -2.7
H2afb1S4R1E0 Mir1955-201ENSMUST00000158014 98 ntBASIC-1.82□□□□□ -2.7
H2afb1S4R1E0 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-1.82□□□□□ -2.7
H2afb1S4R1E0 Mir125b-1-201ENSMUST00000175613 77 ntBASIC-1.82□□□□□ -2.7
H2afb1S4R1E0 Gm22313-201ENSMUST00000158008 129 ntBASIC-1.84□□□□□ -2.7
H2afb1S4R1E0 Mir122-201ENSMUST00000083468 66 ntBASIC-1.84□□□□□ -2.7
H2afb1S4R1E0 Gm22943-201ENSMUST00000158564 76 ntBASIC-1.86□□□□□ -2.71
H2afb1S4R1E0 Gm24651-201ENSMUST00000157107 107 ntBASIC-1.87□□□□□ -2.71
H2afb1S4R1E0 Gm22260-201ENSMUST00000178643 107 ntBASIC-1.87□□□□□ -2.71
H2afb1S4R1E0 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.87□□□□□ -2.71
H2afb1S4R1E0 Gm22056-201ENSMUST00000083386 81 ntBASIC-1.87□□□□□ -2.71
H2afb1S4R1E0 Gm23961-201ENSMUST00000104685 97 ntBASIC-1.88□□□□□ -2.71
H2afb1S4R1E0 Mir379-201ENSMUST00000083564 66 ntBASIC-1.88□□□□□ -2.71
H2afb1S4R1E0 Gm25143-201ENSMUST00000082696 109 ntBASIC-1.91□□□□□ -2.72
H2afb1S4R1E0 Gm23315-201ENSMUST00000158003 109 ntBASIC-1.92□□□□□ -2.72
H2afb1S4R1E0 Gm24502-201ENSMUST00000158453 105 ntBASIC-1.94□□□□□ -2.72
H2afb1S4R1E0 Gm25950-201ENSMUST00000175331 100 ntBASIC-1.94□□□□□ -2.72
H2afb1S4R1E0 Gm24459-201ENSMUST00000082730 86 ntBASIC-1.95□□□□□ -2.72
H2afb1S4R1E0 Gm25524-201ENSMUST00000101821 107 ntBASIC-1.97□□□□□ -2.72
H2afb1S4R1E0 Gm23543-201ENSMUST00000158207 106 ntBASIC-1.97□□□□□ -2.72
H2afb1S4R1E0 Gm22232-201ENSMUST00000104654 94 ntBASIC-1.98□□□□□ -2.73
H2afb1S4R1E0 Gm25248-201ENSMUST00000175473 98 ntBASIC-1.98□□□□□ -2.73
H2afb1S4R1E0 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-2.03□□□□□ -2.73
H2afb1S4R1E0 Gm23812-201ENSMUST00000175156 84 ntBASIC-2.04□□□□□ -2.74
H2afb1S4R1E0 Gm23374-201ENSMUST00000175408 84 ntBASIC-2.04□□□□□ -2.74
H2afb1S4R1E0 Gm22573-201ENSMUST00000082982 102 ntBASIC-2.04□□□□□ -2.74
H2afb1S4R1E0 Gm25601-201ENSMUST00000158356 105 ntBASIC-2.06□□□□□ -2.74
H2afb1S4R1E0 Gm23556-201ENSMUST00000157821 92 ntBASIC-2.09□□□□□ -2.74
H2afb1S4R1E0 Mir297a-3-201ENSMUST00000103768 102 ntBASIC-2.12□□□□□ -2.75
H2afb1S4R1E0 Gm22127-201ENSMUST00000083239 106 ntBASIC-2.13□□□□□ -2.75
H2afb1S4R1E0 Gm26122-201ENSMUST00000083362 82 ntBASIC-2.13□□□□□ -2.75
H2afb1S4R1E0 Gm24091-201ENSMUST00000082550 83 ntBASIC-2.15□□□□□ -2.75
H2afb1S4R1E0 Gm23711-201ENSMUST00000083856 83 ntBASIC-2.15□□□□□ -2.75
H2afb1S4R1E0 Mir7086-201ENSMUST00000183683 65 ntBASIC-2.16□□□□□ -2.76
H2afb1S4R1E0 Snord58b-201ENSMUST00000082937 66 ntBASIC-2.19□□□□□ -2.76
H2afb1S4R1E0 Gm26227-201ENSMUST00000082510 101 ntBASIC-2.2□□□□□ -2.76
H2afb1S4R1E0 Gm24806-201ENSMUST00000117036 90 ntBASIC-2.21□□□□□ -2.76
H2afb1S4R1E0 Gm22301-201ENSMUST00000082656 107 ntBASIC-2.22□□□□□ -2.76
H2afb1S4R1E0 Gm24197-201ENSMUST00000175085 109 ntBASIC-2.24□□□□□ -2.77
H2afb1S4R1E0 Gm26259-201ENSMUST00000104778 97 ntBASIC-2.29□□□□□ -2.78
H2afb1S4R1E0 Gm22925-201ENSMUST00000174956 102 ntBASIC-2.29□□□□□ -2.78
H2afb1S4R1E0 Gm27935-201ENSMUST00000183894 79 ntBASIC-2.31□□□□□ -2.78
H2afb1S4R1E0 Gm23428-201ENSMUST00000122488 102 ntBASIC-2.32□□□□□ -2.78
H2afb1S4R1E0 Gm24016-201ENSMUST00000157726 68 ntBASIC-2.32□□□□□ -2.78
H2afb1S4R1E0 Gm22550-201ENSMUST00000179774 107 ntBASIC-2.34□□□□□ -2.78
H2afb1S4R1E0 Gm22060-201ENSMUST00000082558 107 ntBASIC-2.34□□□□□ -2.78
H2afb1S4R1E0 Mir466o-201ENSMUST00000104832 84 ntBASIC-2.35□□□□□ -2.79
H2afb1S4R1E0 Mir470-201ENSMUST00000093565 75 ntBASIC-2.35□□□□□ -2.79
H2afb1S4R1E0 Gm23707-201ENSMUST00000104366 125 ntBASIC-2.36□□□□□ -2.79
H2afb1S4R1E0 Gm22296-201ENSMUST00000083310 103 ntBASIC-2.37□□□□□ -2.79
H2afb1S4R1E0 Mir664-201ENSMUST00000196796 69 ntBASIC-2.38□□□□□ -2.79
H2afb1S4R1E0 Gm26125-201ENSMUST00000083357 107 ntBASIC-2.38□□□□□ -2.79
H2afb1S4R1E0 Gm24185-201ENSMUST00000122578 105 ntBASIC-2.39□□□□□ -2.79
H2afb1S4R1E0 Mir7670-201ENSMUST00000183689 69 ntBASIC-2.46□□□□□ -2.8
H2afb1S4R1E0 Mir493-201ENSMUST00000103837 83 ntBASIC-2.48□□□□□ -2.81
H2afb1S4R1E0 Gm24631-201ENSMUST00000122765 81 ntBASIC-2.48□□□□□ -2.81
H2afb1S4R1E0 Gm24047-201ENSMUST00000102405 104 ntBASIC-2.51□□□□□ -2.81
H2afb1S4R1E0 Gm24387-201ENSMUST00000104625 90 ntBASIC-2.51□□□□□ -2.81
H2afb1S4R1E0 Mir466m-201ENSMUST00000175052 84 ntBASIC-2.51□□□□□ -2.81
H2afb1S4R1E0 Gm44351-201ENSMUST00000200090 95 ntBASIC-2.52□□□□□ -2.81
H2afb1S4R1E0 Gm23751-201ENSMUST00000157583 136 ntBASIC-2.53□□□□□ -2.81
H2afb1S4R1E0 Gm25705-201ENSMUST00000083119 104 ntBASIC-2.53□□□□□ -2.81
H2afb1S4R1E0 Gm25132-201ENSMUST00000082652 107 ntBASIC-2.55□□□□□ -2.82
H2afb1S4R1E0 Mir467e-201ENSMUST00000103760 87 ntBASIC-2.56□□□□□ -2.82
H2afb1S4R1E0 Mir485-201ENSMUST00000093620 73 ntBASIC-2.56□□□□□ -2.82
H2afb1S4R1E0 Gm26306-201ENSMUST00000157773 119 ntBASIC-2.57□□□□□ -2.82
H2afb1S4R1E0 Gm23066-201ENSMUST00000158237 71 ntBASIC-2.58□□□□□ -2.82
H2afb1S4R1E0 Gm44377-201ENSMUST00000199039 87 ntBASIC-2.58□□□□□ -2.82
H2afb1S4R1E0 Gm24194-201ENSMUST00000116805 90 ntBASIC-2.61□□□□□ -2.83
H2afb1S4R1E0 Mir466b-2-201ENSMUST00000103778 82 ntBASIC-2.63□□□□□ -2.83
H2afb1S4R1E0 Gm22402-201ENSMUST00000174920 110 ntBASIC-2.64□□□□□ -2.83
H2afb1S4R1E0 Gm22183-201ENSMUST00000175420 73 ntBASIC-2.65□□□□□ -2.83
H2afb1S4R1E0 Mir669m-2-201ENSMUST00000158355 98 ntBASIC-2.66□□□□□ -2.84
H2afb1S4R1E0 Gm26231-201ENSMUST00000175218 67 ntBASIC-2.67□□□□□ -2.84
H2afb1S4R1E0 Mir7681-201ENSMUST00000184834 72 ntBASIC-2.67□□□□□ -2.84
H2afb1S4R1E0 Gm44303-201ENSMUST00000196348 83 ntBASIC-2.69□□□□□ -2.84
H2afb1S4R1E0 Gm22385-201ENSMUST00000158189 101 ntBASIC-2.72□□□□□ -2.84
H2afb1S4R1E0 Gm23566-201ENSMUST00000174907 108 ntBASIC-2.73□□□□□ -2.85
H2afb1S4R1E0 Gm27882-201ENSMUST00000184904 74 ntBASIC-2.74□□□□□ -2.85
H2afb1S4R1E0 Mir6395-201ENSMUST00000183885 91 ntBASIC-2.75□□□□□ -2.85
H2afb1S4R1E0 Gm25867-201ENSMUST00000158254 103 ntBASIC-2.77□□□□□ -2.85
H2afb1S4R1E0 Mir124a-1-201ENSMUST00000083663 85 ntBASIC-2.77□□□□□ -2.85
H2afb1S4R1E0 Gm22446-201ENSMUST00000180108 104 ntBASIC-2.83□□□□□ -2.86
H2afb1S4R1E0 Gm27995-201ENSMUST00000184402 100 ntBASIC-2.84□□□□□ -2.86
H2afb1S4R1E0 Gm26307-201ENSMUST00000157767 126 ntBASIC-2.85□□□□□ -2.87
H2afb1S4R1E0 Gm26008-201ENSMUST00000158797 99 ntBASIC-2.88□□□□□ -2.87
H2afb1S4R1E0 Mir7218-201ENSMUST00000200050 59 ntBASIC-2.88□□□□□ -2.87
Retrieved 100 of 76,532 protein–RNA pairs in 152.8 ms