Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm24723-201ENSMUST00000158233 132 ntBASIC-2.21□□□□□ -2.76
Trim3Q9R1R2 Mir467a-6-201ENSMUST00000177790 83 ntBASIC-2.21□□□□□ -2.76
Trim3Q9R1R2 Mir467a-3-201ENSMUST00000178082 83 ntBASIC-2.21□□□□□ -2.76
Trim3Q9R1R2 Mir467a-7-201ENSMUST00000178635 83 ntBASIC-2.21□□□□□ -2.76
Trim3Q9R1R2 Mir467a-10-201ENSMUST00000179320 83 ntBASIC-2.21□□□□□ -2.76
Trim3Q9R1R2 Mir467a-5-201ENSMUST00000179352 83 ntBASIC-2.21□□□□□ -2.76
Trim3Q9R1R2 Mir467a-2-201ENSMUST00000179447 83 ntBASIC-2.21□□□□□ -2.76
Trim3Q9R1R2 Mir467a-9-201ENSMUST00000179752 83 ntBASIC-2.21□□□□□ -2.76
Trim3Q9R1R2 Mir467a-4-201ENSMUST00000179923 83 ntBASIC-2.21□□□□□ -2.76
Trim3Q9R1R2 Mir467a-8-201ENSMUST00000180070 83 ntBASIC-2.21□□□□□ -2.76
Trim3Q9R1R2 Gm27995-201ENSMUST00000184402 100 ntBASIC-2.21□□□□□ -2.76
Trim3Q9R1R2 Gm25681-201ENSMUST00000083938 106 ntBASIC-2.21□□□□□ -2.76
Trim3Q9R1R2 Gm23707-201ENSMUST00000104366 125 ntBASIC-2.22□□□□□ -2.76
Trim3Q9R1R2 Gm24097-201ENSMUST00000178720 107 ntBASIC-2.22□□□□□ -2.76
Trim3Q9R1R2 Mir2136-201ENSMUST00000158781 75 ntBASIC-2.23□□□□□ -2.77
Trim3Q9R1R2 Gm25023-201ENSMUST00000082977 107 ntBASIC-2.23□□□□□ -2.77
Trim3Q9R1R2 Gm22313-201ENSMUST00000158008 129 ntBASIC-2.24□□□□□ -2.77
Trim3Q9R1R2 Gm44932-201ENSMUST00000206799 121 ntBASIC-2.24□□□□□ -2.77
Trim3Q9R1R2 Gm26485-201ENSMUST00000158019 64 ntBASIC-2.25□□□□□ -2.77
Trim3Q9R1R2 Gm23649-201ENSMUST00000179007 107 ntBASIC-2.25□□□□□ -2.77
Trim3Q9R1R2 Gm25183-201ENSMUST00000157752 106 ntBASIC-2.26□□□□□ -2.77
Trim3Q9R1R2 Gm22573-201ENSMUST00000082982 102 ntBASIC-2.26□□□□□ -2.77
Trim3Q9R1R2 Gm26231-201ENSMUST00000175218 67 ntBASIC-2.27□□□□□ -2.77
Trim3Q9R1R2 Gm44481-201ENSMUST00000197288 84 ntBASIC-2.28□□□□□ -2.77
Trim3Q9R1R2 Gm44339-201ENSMUST00000200598 84 ntBASIC-2.28□□□□□ -2.77
Trim3Q9R1R2 Gm24297-201ENSMUST00000158300 68 ntBASIC-2.29□□□□□ -2.78
Trim3Q9R1R2 Gm24797-201ENSMUST00000178103 107 ntBASIC-2.29□□□□□ -2.78
Trim3Q9R1R2 Gm11966-201ENSMUST00000119907 87 ntBASIC-2.3□□□□□ -2.78
Trim3Q9R1R2 Gm23992-201ENSMUST00000174981 67 ntBASIC-2.3□□□□□ -2.78
Trim3Q9R1R2 Gm25705-201ENSMUST00000083119 104 ntBASIC-2.3□□□□□ -2.78
Trim3Q9R1R2 Gm25382-201ENSMUST00000157811 97 ntBASIC-2.31□□□□□ -2.78
Trim3Q9R1R2 Gm22679-201ENSMUST00000116975 100 ntBASIC-2.32□□□□□ -2.78
Trim3Q9R1R2 Mir6395-201ENSMUST00000183885 91 ntBASIC-2.32□□□□□ -2.78
Trim3Q9R1R2 Gm27450-201ENSMUST00000104632 90 ntBASIC-2.33□□□□□ -2.78
Trim3Q9R1R2 Mir466q-201ENSMUST00000175249 76 ntBASIC-2.33□□□□□ -2.78
Trim3Q9R1R2 Gm23293-201ENSMUST00000082552 104 ntBASIC-2.34□□□□□ -2.78
Trim3Q9R1R2 Mir295-201ENSMUST00000104694 69 ntBASIC-2.35□□□□□ -2.79
Trim3Q9R1R2 Gm24226-201ENSMUST00000158826 97 ntBASIC-2.35□□□□□ -2.79
Trim3Q9R1R2 Gm26472-201ENSMUST00000116760 83 ntBASIC-2.37□□□□□ -2.79
Trim3Q9R1R2 Gm22232-201ENSMUST00000104654 94 ntBASIC-2.38□□□□□ -2.79
Trim3Q9R1R2 Gm25779-201ENSMUST00000116710 95 ntBASIC-2.38□□□□□ -2.79
Trim3Q9R1R2 Gm24646-201ENSMUST00000157109 99 ntBASIC-2.38□□□□□ -2.79
Trim3Q9R1R2 Gm23785-201ENSMUST00000116741 96 ntBASIC-2.39□□□□□ -2.79
Trim3Q9R1R2 Gm23066-201ENSMUST00000158237 71 ntBASIC-2.4□□□□□ -2.79
Trim3Q9R1R2 AC157278.1-201ENSMUST00000221621 148 ntBASIC-2.4□□□□□ -2.79
Trim3Q9R1R2 Gm26307-201ENSMUST00000157767 126 ntBASIC-2.41□□□□□ -2.8
Trim3Q9R1R2 Gm24016-201ENSMUST00000157726 68 ntBASIC-2.42□□□□□ -2.8
Trim3Q9R1R2 Gm23428-201ENSMUST00000122488 102 ntBASIC-2.44□□□□□ -2.8
Trim3Q9R1R2 Gm26139-201ENSMUST00000180098 107 ntBASIC-2.45□□□□□ -2.8
Trim3Q9R1R2 Gm24631-201ENSMUST00000122765 81 ntBASIC-2.46□□□□□ -2.8
Trim3Q9R1R2 Gm25143-201ENSMUST00000082696 109 ntBASIC-2.46□□□□□ -2.8
Trim3Q9R1R2 Gm23543-201ENSMUST00000158207 106 ntBASIC-2.47□□□□□ -2.8
Trim3Q9R1R2 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC-2.52□□□□□ -2.81
Trim3Q9R1R2 Gm23787-201ENSMUST00000122538 73 ntBASIC-2.52□□□□□ -2.81
Trim3Q9R1R2 Gm24502-201ENSMUST00000158453 105 ntBASIC-2.52□□□□□ -2.81
Trim3Q9R1R2 Gm22296-201ENSMUST00000083310 103 ntBASIC-2.53□□□□□ -2.81
Trim3Q9R1R2 Gm26052-201ENSMUST00000104646 84 ntBASIC-2.54□□□□□ -2.82
Trim3Q9R1R2 Mir154-201ENSMUST00000083514 66 ntBASIC-2.54□□□□□ -2.82
Trim3Q9R1R2 Gm22039-201ENSMUST00000157278 132 ntBASIC-2.56□□□□□ -2.82
Trim3Q9R1R2 Gm23315-201ENSMUST00000158003 109 ntBASIC-2.56□□□□□ -2.82
Trim3Q9R1R2 mt-Tl2-201ENSMUST00000082417 71 ntBASIC-2.56□□□□□ -2.82
Trim3Q9R1R2 Mir466l-201ENSMUST00000104866 121 ntBASIC-2.62□□□□□ -2.83
Trim3Q9R1R2 Gm23556-201ENSMUST00000157821 92 ntBASIC-2.62□□□□□ -2.83
Trim3Q9R1R2 Gm22071-201ENSMUST00000116857 83 ntBASIC-2.63□□□□□ -2.83
Trim3Q9R1R2 Mir493-201ENSMUST00000103837 83 ntBASIC-2.64□□□□□ -2.83
Trim3Q9R1R2 Gm22879-201ENSMUST00000082895 74 ntBASIC-2.64□□□□□ -2.83
Trim3Q9R1R2 Gm25465-201ENSMUST00000157716 105 ntBASIC-2.67□□□□□ -2.84
Trim3Q9R1R2 n-R5s218-201ENSMUST00000122583 109 ntBASIC-2.69□□□□□ -2.84
Trim3Q9R1R2 Gm27882-201ENSMUST00000184904 74 ntBASIC-2.71□□□□□ -2.84
Trim3Q9R1R2 Gm22078-201ENSMUST00000157593 103 ntBASIC-2.72□□□□□ -2.84
Trim3Q9R1R2 Mir124a-1-201ENSMUST00000083663 85 ntBASIC-2.74□□□□□ -2.85
Trim3Q9R1R2 Mir1912-201ENSMUST00000175298 87 ntBASIC-2.77□□□□□ -2.85
Trim3Q9R1R2 Mir34c-201ENSMUST00000083653 77 ntBASIC-2.77□□□□□ -2.85
Trim3Q9R1R2 Mir1906-1-201ENSMUST00000122586 80 ntBASIC-2.81□□□□□ -2.86
Trim3Q9R1R2 Mir1906-2-201ENSMUST00000122610 80 ntBASIC-2.81□□□□□ -2.86
Trim3Q9R1R2 Gm24710-201ENSMUST00000175235 101 ntBASIC-2.85□□□□□ -2.87
Trim3Q9R1R2 Gm24135-201ENSMUST00000179085 101 ntBASIC-2.85□□□□□ -2.87
Trim3Q9R1R2 Mir669a-3-201ENSMUST00000102074 109 ntBASIC-2.86□□□□□ -2.87
Trim3Q9R1R2 Mir1955-201ENSMUST00000158014 98 ntBASIC-2.87□□□□□ -2.87
Trim3Q9R1R2 Mir125b-1-201ENSMUST00000175613 77 ntBASIC-2.9□□□□□ -2.87
Trim3Q9R1R2 Gm25222-201ENSMUST00000158199 126 ntBASIC-2.91□□□□□ -2.88
Trim3Q9R1R2 Mir664-201ENSMUST00000196796 69 ntBASIC-2.91□□□□□ -2.88
Trim3Q9R1R2 Gm22056-201ENSMUST00000083386 81 ntBASIC-2.92□□□□□ -2.88
Trim3Q9R1R2 Gm22474-201ENSMUST00000179407 107 ntBASIC-2.93□□□□□ -2.88
Trim3Q9R1R2 Gm24651-201ENSMUST00000157107 107 ntBASIC-2.96□□□□□ -2.88
Trim3Q9R1R2 Gm25867-201ENSMUST00000158254 103 ntBASIC-2.96□□□□□ -2.88
Trim3Q9R1R2 Gm22260-201ENSMUST00000178643 107 ntBASIC-2.98□□□□□ -2.89
Trim3Q9R1R2 Mir466b-2-201ENSMUST00000103778 82 ntBASIC-3.02□□□□□ -2.89
Trim3Q9R1R2 Gm22925-201ENSMUST00000174956 102 ntBASIC-3.04□□□□□ -2.9
Trim3Q9R1R2 Gm22067-201ENSMUST00000122790 107 ntBASIC-3.05□□□□□ -2.9
Trim3Q9R1R2 Gm26008-201ENSMUST00000158797 99 ntBASIC-3.05□□□□□ -2.9
Trim3Q9R1R2 Gm23826-201ENSMUST00000157394 119 ntBASIC-3.1□□□□□ -2.91
Trim3Q9R1R2 Snord58b-201ENSMUST00000082937 66 ntBASIC-3.1□□□□□ -2.91
Trim3Q9R1R2 Gm22033-201ENSMUST00000116947 90 ntBASIC-3.13□□□□□ -2.91
Trim3Q9R1R2 Gm25354-201ENSMUST00000179110 105 ntBASIC-3.13□□□□□ -2.91
Trim3Q9R1R2 Gm24396-201ENSMUST00000116905 93 ntBASIC-3.15□□□□□ -2.91
Trim3Q9R1R2 Gm23210-201ENSMUST00000158668 98 ntBASIC-3.15□□□□□ -2.91
Trim3Q9R1R2 Gm24387-201ENSMUST00000104625 90 ntBASIC-3.22□□□□□ -2.92
Trim3Q9R1R2 Gm23237-201ENSMUST00000104639 92 ntBASIC-3.22□□□□□ -2.92
Trim3Q9R1R2 Gm23961-201ENSMUST00000104685 97 ntBASIC-3.23□□□□□ -2.93
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms