Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm25143-201ENSMUST00000082696 109 ntBASIC-2.95□□□□□ -2.88
Lima1Q9ERG0 Mir1187-201ENSMUST00000116936 122 ntBASIC-2.96□□□□□ -2.88
Lima1Q9ERG0 Gm25815-201ENSMUST00000082755 107 ntBASIC-2.96□□□□□ -2.88
Lima1Q9ERG0 Gm22573-201ENSMUST00000082982 102 ntBASIC-2.98□□□□□ -2.89
Lima1Q9ERG0 Gm26231-201ENSMUST00000175218 67 ntBASIC-2.99□□□□□ -2.89
Lima1Q9ERG0 Gm22232-201ENSMUST00000104654 94 ntBASIC-3□□□□□ -2.89
Lima1Q9ERG0 Gm23652-201ENSMUST00000116752 107 ntBASIC-3□□□□□ -2.89
Lima1Q9ERG0 Gm27450-201ENSMUST00000104632 90 ntBASIC-3.02□□□□□ -2.89
Lima1Q9ERG0 Gm26485-201ENSMUST00000158019 64 ntBASIC-3.02□□□□□ -2.89
Lima1Q9ERG0 Gm24502-201ENSMUST00000158453 105 ntBASIC-3.02□□□□□ -2.89
Lima1Q9ERG0 Gm23787-201ENSMUST00000122538 73 ntBASIC-3.03□□□□□ -2.89
Lima1Q9ERG0 Gm22251-201ENSMUST00000083216 107 ntBASIC-3.03□□□□□ -2.89
Lima1Q9ERG0 Gm44932-201ENSMUST00000206799 121 ntBASIC-3.04□□□□□ -2.9
Lima1Q9ERG0 Gm25705-201ENSMUST00000083119 104 ntBASIC-3.04□□□□□ -2.9
Lima1Q9ERG0 Gm22381-201ENSMUST00000158186 107 ntBASIC-3.07□□□□□ -2.9
Lima1Q9ERG0 Snord50a-201ENSMUST00000178154 72 ntBASIC-3.07□□□□□ -2.9
Lima1Q9ERG0 Gm24463-201ENSMUST00000178417 72 ntBASIC-3.07□□□□□ -2.9
Lima1Q9ERG0 Gm26307-201ENSMUST00000157767 126 ntBASIC-3.08□□□□□ -2.9
Lima1Q9ERG0 Gm24226-201ENSMUST00000158826 97 ntBASIC-3.08□□□□□ -2.9
Lima1Q9ERG0 AC157278.1-201ENSMUST00000221621 148 ntBASIC-3.08□□□□□ -2.9
Lima1Q9ERG0 Gm26052-201ENSMUST00000104646 84 ntBASIC-3.09□□□□□ -2.9
Lima1Q9ERG0 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC-3.09□□□□□ -2.9
Lima1Q9ERG0 Gm11966-201ENSMUST00000119907 87 ntBASIC-3.09□□□□□ -2.9
Lima1Q9ERG0 Gm24016-201ENSMUST00000157726 68 ntBASIC-3.09□□□□□ -2.9
Lima1Q9ERG0 Gm23066-201ENSMUST00000158237 71 ntBASIC-3.09□□□□□ -2.9
Lima1Q9ERG0 Gm22879-201ENSMUST00000082895 74 ntBASIC-3.09□□□□□ -2.9
Lima1Q9ERG0 Gm23543-201ENSMUST00000158207 106 ntBASIC-3.11□□□□□ -2.91
Lima1Q9ERG0 Gm23038-201ENSMUST00000083873 104 ntBASIC-3.11□□□□□ -2.91
Lima1Q9ERG0 Gm26139-201ENSMUST00000180098 107 ntBASIC-3.12□□□□□ -2.91
Lima1Q9ERG0 Mir6395-201ENSMUST00000183885 91 ntBASIC-3.12□□□□□ -2.91
Lima1Q9ERG0 Gm23556-201ENSMUST00000157821 92 ntBASIC-3.13□□□□□ -2.91
Lima1Q9ERG0 Gm23315-201ENSMUST00000158003 109 ntBASIC-3.13□□□□□ -2.91
Lima1Q9ERG0 Gm24631-201ENSMUST00000122765 81 ntBASIC-3.15□□□□□ -2.91
Lima1Q9ERG0 Gm23785-201ENSMUST00000116741 96 ntBASIC-3.22□□□□□ -2.92
Lima1Q9ERG0 Gm23428-201ENSMUST00000122488 102 ntBASIC-3.22□□□□□ -2.92
Lima1Q9ERG0 Gm22039-201ENSMUST00000157278 132 ntBASIC-3.23□□□□□ -2.93
Lima1Q9ERG0 Gm22950-201ENSMUST00000082776 107 ntBASIC-3.23□□□□□ -2.93
Lima1Q9ERG0 Gm44481-201ENSMUST00000197288 84 ntBASIC-3.24□□□□□ -2.93
Lima1Q9ERG0 Gm25681-201ENSMUST00000083938 106 ntBASIC-3.24□□□□□ -2.93
Lima1Q9ERG0 Gm23293-201ENSMUST00000082552 104 ntBASIC-3.25□□□□□ -2.93
Lima1Q9ERG0 Gm25428-201ENSMUST00000157608 114 ntBASIC-3.27□□□□□ -2.93
Lima1Q9ERG0 Gm24482-201ENSMUST00000117005 93 ntBASIC-3.28□□□□□ -2.93
Lima1Q9ERG0 Gm25382-201ENSMUST00000157811 97 ntBASIC-3.28□□□□□ -2.93
Lima1Q9ERG0 Gm25465-201ENSMUST00000157716 105 ntBASIC-3.32□□□□□ -2.94
Lima1Q9ERG0 Gm22296-201ENSMUST00000083310 103 ntBASIC-3.32□□□□□ -2.94
Lima1Q9ERG0 Mir1955-201ENSMUST00000158014 98 ntBASIC-3.33□□□□□ -2.94
Lima1Q9ERG0 Gm25022-201ENSMUST00000102205 83 ntBASIC-3.35□□□□□ -2.95
Lima1Q9ERG0 Mir467a-6-201ENSMUST00000177790 83 ntBASIC-3.35□□□□□ -2.95
Lima1Q9ERG0 Mir467a-3-201ENSMUST00000178082 83 ntBASIC-3.35□□□□□ -2.95
Lima1Q9ERG0 Mir467a-7-201ENSMUST00000178635 83 ntBASIC-3.35□□□□□ -2.95
Lima1Q9ERG0 Mir467a-10-201ENSMUST00000179320 83 ntBASIC-3.35□□□□□ -2.95
Lima1Q9ERG0 Mir467a-5-201ENSMUST00000179352 83 ntBASIC-3.35□□□□□ -2.95
Lima1Q9ERG0 Mir467a-2-201ENSMUST00000179447 83 ntBASIC-3.35□□□□□ -2.95
Lima1Q9ERG0 Mir467a-9-201ENSMUST00000179752 83 ntBASIC-3.35□□□□□ -2.95
Lima1Q9ERG0 Mir467a-4-201ENSMUST00000179923 83 ntBASIC-3.35□□□□□ -2.95
Lima1Q9ERG0 Mir467a-8-201ENSMUST00000180070 83 ntBASIC-3.35□□□□□ -2.95
Lima1Q9ERG0 Gm22056-201ENSMUST00000083386 81 ntBASIC-3.37□□□□□ -2.95
Lima1Q9ERG0 Mir125b-1-201ENSMUST00000175613 77 ntBASIC-3.38□□□□□ -2.95
Lima1Q9ERG0 Mir154-201ENSMUST00000083514 66 ntBASIC-3.38□□□□□ -2.95
Lima1Q9ERG0 Gm44339-201ENSMUST00000200598 84 ntBASIC-3.39□□□□□ -2.95
Lima1Q9ERG0 Gm22679-201ENSMUST00000116975 100 ntBASIC-3.41□□□□□ -2.96
Lima1Q9ERG0 Gm24651-201ENSMUST00000157107 107 ntBASIC-3.42□□□□□ -2.96
Lima1Q9ERG0 Gm24710-201ENSMUST00000175235 101 ntBASIC-3.42□□□□□ -2.96
Lima1Q9ERG0 Gm24135-201ENSMUST00000179085 101 ntBASIC-3.42□□□□□ -2.96
Lima1Q9ERG0 mt-Tl2-201ENSMUST00000082417 71 ntBASIC-3.42□□□□□ -2.96
Lima1Q9ERG0 Gm24410-201ENSMUST00000083433 107 ntBASIC-3.42□□□□□ -2.96
Lima1Q9ERG0 Gm22071-201ENSMUST00000116857 83 ntBASIC-3.43□□□□□ -2.96
Lima1Q9ERG0 Gm24586-201ENSMUST00000116695 89 ntBASIC-3.44□□□□□ -2.96
Lima1Q9ERG0 Gm23653-201ENSMUST00000116751 97 ntBASIC-3.44□□□□□ -2.96
Lima1Q9ERG0 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC-3.46□□□□□ -2.96
Lima1Q9ERG0 Mir493-201ENSMUST00000103837 83 ntBASIC-3.47□□□□□ -2.96
Lima1Q9ERG0 Gm22078-201ENSMUST00000157593 103 ntBASIC-3.47□□□□□ -2.96
Lima1Q9ERG0 Gm22260-201ENSMUST00000178643 107 ntBASIC-3.47□□□□□ -2.96
Lima1Q9ERG0 Gm25222-201ENSMUST00000158199 126 ntBASIC-3.48□□□□□ -2.97
Lima1Q9ERG0 Mir669a-3-201ENSMUST00000102074 109 ntBASIC-3.5□□□□□ -2.97
Lima1Q9ERG0 n-R5s218-201ENSMUST00000122583 109 ntBASIC-3.52□□□□□ -2.97
Lima1Q9ERG0 Mir1912-201ENSMUST00000175298 87 ntBASIC-3.54□□□□□ -2.98
Lima1Q9ERG0 Gm27882-201ENSMUST00000184904 74 ntBASIC-3.56□□□□□ -2.98
Lima1Q9ERG0 Gm22474-201ENSMUST00000179407 107 ntBASIC-3.58□□□□□ -2.98
Lima1Q9ERG0 Mir664-201ENSMUST00000196796 69 ntBASIC-3.59□□□□□ -2.98
Lima1Q9ERG0 Mir1906-1-201ENSMUST00000122586 80 ntBASIC-3.63□□□□□ -2.99
Lima1Q9ERG0 Mir1906-2-201ENSMUST00000122610 80 ntBASIC-3.63□□□□□ -2.99
Lima1Q9ERG0 Gm22925-201ENSMUST00000174956 102 ntBASIC-3.64□□□□□ -2.99
Lima1Q9ERG0 Mir124a-1-201ENSMUST00000083663 85 ntBASIC-3.67□□□□□ -3
Lima1Q9ERG0 Mir466l-201ENSMUST00000104866 121 ntBASIC-3.69□□□□□ -3
Lima1Q9ERG0 Mir34c-201ENSMUST00000083653 77 ntBASIC-3.72□□□□□ -3
Lima1Q9ERG0 Gm44385-201ENSMUST00000198781 81 ntBASIC-3.74□□□□□ -3.01
Lima1Q9ERG0 Snord58b-201ENSMUST00000082937 66 ntBASIC-3.78□□□□□ -3.01
Lima1Q9ERG0 Gm23961-201ENSMUST00000104685 97 ntBASIC-3.88□□□□□ -3.03
Lima1Q9ERG0 Gm25867-201ENSMUST00000158254 103 ntBASIC-3.93□□□□□ -3.04
Lima1Q9ERG0 Gm26227-201ENSMUST00000082510 101 ntBASIC-3.94□□□□□ -3.04
Lima1Q9ERG0 Mir466b-2-201ENSMUST00000103778 82 ntBASIC-3.96□□□□□ -3.04
Lima1Q9ERG0 Gm26008-201ENSMUST00000158797 99 ntBASIC-3.99□□□□□ -3.05
Lima1Q9ERG0 Gm24396-201ENSMUST00000116905 93 ntBASIC-4□□□□□ -3.05
Lima1Q9ERG0 Gm22127-201ENSMUST00000083239 106 ntBASIC-4□□□□□ -3.05
Lima1Q9ERG0 Gm25524-201ENSMUST00000101821 107 ntBASIC-4.02□□□□□ -3.05
Lima1Q9ERG0 Gm23826-201ENSMUST00000157394 119 ntBASIC-4.06□□□□□ -3.06
Lima1Q9ERG0 Gm22301-201ENSMUST00000082656 107 ntBASIC-4.06□□□□□ -3.06
Lima1Q9ERG0 Gm24387-201ENSMUST00000104625 90 ntBASIC-4.07□□□□□ -3.06
Lima1Q9ERG0 Gm26306-201ENSMUST00000157773 119 ntBASIC-4.08□□□□□ -3.06
Retrieved 100 of 76,532 protein–RNA pairs in 148.1 ms