Protein–RNA interactions for Protein: Q9D5Y1

Ccdc39, Coiled-coil domain-containing protein 39, mousemouse

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39Q9D5Y1 Gm24047-201ENSMUST00000102405 104 ntBASIC-1.16□□□□□ -2.6
Ccdc39Q9D5Y1 Mir1955-201ENSMUST00000158014 98 ntBASIC-1.18□□□□□ -2.6
Ccdc39Q9D5Y1 Mir6339-201ENSMUST00000185120 117 ntBASIC-1.19□□□□□ -2.6
Ccdc39Q9D5Y1 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.19□□□□□ -2.6
Ccdc39Q9D5Y1 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.19□□□□□ -2.6
Ccdc39Q9D5Y1 Mir6964-201ENSMUST00000200252 59 ntBASIC-1.19□□□□□ -2.6
Ccdc39Q9D5Y1 AC154832.1-201ENSMUST00000228928 141 ntBASIC-1.19□□□□□ -2.6
Ccdc39Q9D5Y1 Mir192-201ENSMUST00000083589 89 ntBASIC-1.19□□□□□ -2.6
Ccdc39Q9D5Y1 Gm26043-201ENSMUST00000116912 91 ntBASIC-1.2□□□□□ -2.6
Ccdc39Q9D5Y1 Gm24197-201ENSMUST00000175085 109 ntBASIC-1.2□□□□□ -2.6
Ccdc39Q9D5Y1 Gm23961-201ENSMUST00000104685 97 ntBASIC-1.22□□□□□ -2.6
Ccdc39Q9D5Y1 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-1.22□□□□□ -2.6
Ccdc39Q9D5Y1 Gm24651-201ENSMUST00000157107 107 ntBASIC-1.24□□□□□ -2.61
Ccdc39Q9D5Y1 Mir539-201ENSMUST00000102109 74 ntBASIC-1.26□□□□□ -2.61
Ccdc39Q9D5Y1 Gm25524-201ENSMUST00000101821 107 ntBASIC-1.28□□□□□ -2.61
Ccdc39Q9D5Y1 Mir125b-1-201ENSMUST00000175613 77 ntBASIC-1.28□□□□□ -2.61
Ccdc39Q9D5Y1 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.28□□□□□ -2.61
Ccdc39Q9D5Y1 Gm22260-201ENSMUST00000178643 107 ntBASIC-1.28□□□□□ -2.61
Ccdc39Q9D5Y1 Gm24646-201ENSMUST00000157109 99 ntBASIC-1.29□□□□□ -2.62
Ccdc39Q9D5Y1 Gm22056-201ENSMUST00000083386 81 ntBASIC-1.29□□□□□ -2.62
Ccdc39Q9D5Y1 n-R5s153-201ENSMUST00000083451 116 ntBASIC-1.3□□□□□ -2.62
Ccdc39Q9D5Y1 Gm22464-201ENSMUST00000175273 64 ntBASIC-1.31□□□□□ -2.62
Ccdc39Q9D5Y1 Snord8-201ENSMUST00000175303 110 ntBASIC-1.31□□□□□ -2.62
Ccdc39Q9D5Y1 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.32□□□□□ -2.62
Ccdc39Q9D5Y1 Gm24459-201ENSMUST00000082730 86 ntBASIC-1.32□□□□□ -2.62
Ccdc39Q9D5Y1 Gm27366-201ENSMUST00000184967 108 ntBASIC-1.33□□□□□ -2.62
Ccdc39Q9D5Y1 Gm22783-201ENSMUST00000104089 107 ntBASIC-1.34□□□□□ -2.62
Ccdc39Q9D5Y1 Gm26472-201ENSMUST00000116760 83 ntBASIC-1.34□□□□□ -2.62
Ccdc39Q9D5Y1 Gm23315-201ENSMUST00000158003 109 ntBASIC-1.34□□□□□ -2.62
Ccdc39Q9D5Y1 Gm22313-201ENSMUST00000158008 129 ntBASIC-1.38□□□□□ -2.63
Ccdc39Q9D5Y1 Gm27944-201ENSMUST00000185155 103 ntBASIC-1.38□□□□□ -2.63
Ccdc39Q9D5Y1 Gm25143-201ENSMUST00000082696 109 ntBASIC-1.41□□□□□ -2.64
Ccdc39Q9D5Y1 Gm24502-201ENSMUST00000158453 105 ntBASIC-1.42□□□□□ -2.64
Ccdc39Q9D5Y1 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.42□□□□□ -2.64
Ccdc39Q9D5Y1 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.42□□□□□ -2.64
Ccdc39Q9D5Y1 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-1.43□□□□□ -2.64
Ccdc39Q9D5Y1 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.44□□□□□ -2.64
Ccdc39Q9D5Y1 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.45□□□□□ -2.64
Ccdc39Q9D5Y1 Mir122-201ENSMUST00000083468 66 ntBASIC-1.45□□□□□ -2.64
Ccdc39Q9D5Y1 Gm22127-201ENSMUST00000083239 106 ntBASIC-1.46□□□□□ -2.64
Ccdc39Q9D5Y1 Mir379-201ENSMUST00000083564 66 ntBASIC-1.46□□□□□ -2.64
Ccdc39Q9D5Y1 Gm22232-201ENSMUST00000104654 94 ntBASIC-1.47□□□□□ -2.64
Ccdc39Q9D5Y1 Gm23543-201ENSMUST00000158207 106 ntBASIC-1.49□□□□□ -2.65
Ccdc39Q9D5Y1 Gm26227-201ENSMUST00000082510 101 ntBASIC-1.51□□□□□ -2.65
Ccdc39Q9D5Y1 Gm26259-201ENSMUST00000104778 97 ntBASIC-1.52□□□□□ -2.65
Ccdc39Q9D5Y1 Gm22573-201ENSMUST00000082982 102 ntBASIC-1.52□□□□□ -2.65
Ccdc39Q9D5Y1 Gm22446-201ENSMUST00000180108 104 ntBASIC-1.53□□□□□ -2.65
Ccdc39Q9D5Y1 Gm22301-201ENSMUST00000082656 107 ntBASIC-1.54□□□□□ -2.66
Ccdc39Q9D5Y1 Snord58b-201ENSMUST00000082937 66 ntBASIC-1.59□□□□□ -2.66
Ccdc39Q9D5Y1 Gm25705-201ENSMUST00000083119 104 ntBASIC-1.6□□□□□ -2.67
Ccdc39Q9D5Y1 Gm23556-201ENSMUST00000157821 92 ntBASIC-1.61□□□□□ -2.67
Ccdc39Q9D5Y1 Gm22550-201ENSMUST00000179774 107 ntBASIC-1.61□□□□□ -2.67
Ccdc39Q9D5Y1 Gm22060-201ENSMUST00000082558 107 ntBASIC-1.61□□□□□ -2.67
Ccdc39Q9D5Y1 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-1.65□□□□□ -2.67
Ccdc39Q9D5Y1 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.66□□□□□ -2.68
Ccdc39Q9D5Y1 Gm22925-201ENSMUST00000174956 102 ntBASIC-1.66□□□□□ -2.68
Ccdc39Q9D5Y1 Gm26122-201ENSMUST00000083362 82 ntBASIC-1.67□□□□□ -2.68
Ccdc39Q9D5Y1 Mir297a-3-201ENSMUST00000103768 102 ntBASIC-1.7□□□□□ -2.68
Ccdc39Q9D5Y1 Mir7086-201ENSMUST00000183683 65 ntBASIC-1.72□□□□□ -2.68
Ccdc39Q9D5Y1 Gm24806-201ENSMUST00000117036 90 ntBASIC-1.73□□□□□ -2.69
Ccdc39Q9D5Y1 Gm26306-201ENSMUST00000157773 119 ntBASIC-1.74□□□□□ -2.69
Ccdc39Q9D5Y1 Gm25132-201ENSMUST00000082652 107 ntBASIC-1.75□□□□□ -2.69
Ccdc39Q9D5Y1 Gm23428-201ENSMUST00000122488 102 ntBASIC-1.77□□□□□ -2.69
Ccdc39Q9D5Y1 Mir664-201ENSMUST00000196796 69 ntBASIC-1.78□□□□□ -2.69
Ccdc39Q9D5Y1 Gm24387-201ENSMUST00000104625 90 ntBASIC-1.81□□□□□ -2.7
Ccdc39Q9D5Y1 Gm23335-201ENSMUST00000117021 90 ntBASIC-1.81□□□□□ -2.7
Ccdc39Q9D5Y1 Gm22296-201ENSMUST00000083310 103 ntBASIC-1.81□□□□□ -2.7
Ccdc39Q9D5Y1 Mir466o-201ENSMUST00000104832 84 ntBASIC-1.83□□□□□ -2.7
Ccdc39Q9D5Y1 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.83□□□□□ -2.7
Ccdc39Q9D5Y1 Gm23707-201ENSMUST00000104366 125 ntBASIC-1.84□□□□□ -2.7
Ccdc39Q9D5Y1 Gm24016-201ENSMUST00000157726 68 ntBASIC-1.84□□□□□ -2.7
Ccdc39Q9D5Y1 Mir470-201ENSMUST00000093565 75 ntBASIC-1.84□□□□□ -2.7
Ccdc39Q9D5Y1 Gm24194-201ENSMUST00000116805 90 ntBASIC-1.86□□□□□ -2.71
Ccdc39Q9D5Y1 Gm24185-201ENSMUST00000122578 105 ntBASIC-1.88□□□□□ -2.71
Ccdc39Q9D5Y1 Mir493-201ENSMUST00000103837 83 ntBASIC-1.9□□□□□ -2.71
Ccdc39Q9D5Y1 Mir669m-2-201ENSMUST00000158355 98 ntBASIC-1.9□□□□□ -2.71
Ccdc39Q9D5Y1 Gm26125-201ENSMUST00000083357 107 ntBASIC-1.92□□□□□ -2.72
Ccdc39Q9D5Y1 Mir7670-201ENSMUST00000183689 69 ntBASIC-1.93□□□□□ -2.72
Ccdc39Q9D5Y1 Mir7681-201ENSMUST00000184834 72 ntBASIC-1.93□□□□□ -2.72
Ccdc39Q9D5Y1 Gm24631-201ENSMUST00000122765 81 ntBASIC-1.95□□□□□ -2.72
Ccdc39Q9D5Y1 Gm44303-201ENSMUST00000196348 83 ntBASIC-1.95□□□□□ -2.72
Ccdc39Q9D5Y1 Mir7218-201ENSMUST00000200050 59 ntBASIC-1.97□□□□□ -2.72
Ccdc39Q9D5Y1 Mir466b-2-201ENSMUST00000103778 82 ntBASIC-1.98□□□□□ -2.73
Ccdc39Q9D5Y1 Gm24531-201ENSMUST00000157945 100 ntBASIC-1.98□□□□□ -2.73
Ccdc39Q9D5Y1 Gm23421-201ENSMUST00000158934 104 ntBASIC-1.98□□□□□ -2.73
Ccdc39Q9D5Y1 Mir485-201ENSMUST00000093620 73 ntBASIC-1.98□□□□□ -2.73
Ccdc39Q9D5Y1 Gm23066-201ENSMUST00000158237 71 ntBASIC-2.02□□□□□ -2.73
Ccdc39Q9D5Y1 Gm23751-201ENSMUST00000157583 136 ntBASIC-2.04□□□□□ -2.74
Ccdc39Q9D5Y1 Gm44351-201ENSMUST00000200090 95 ntBASIC-2.04□□□□□ -2.74
Ccdc39Q9D5Y1 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-2.05□□□□□ -2.74
Ccdc39Q9D5Y1 Gm22385-201ENSMUST00000158189 101 ntBASIC-2.05□□□□□ -2.74
Ccdc39Q9D5Y1 Mir467e-201ENSMUST00000103760 87 ntBASIC-2.06□□□□□ -2.74
Ccdc39Q9D5Y1 Gm44377-201ENSMUST00000199039 87 ntBASIC-2.06□□□□□ -2.74
Ccdc39Q9D5Y1 Gm27882-201ENSMUST00000184904 74 ntBASIC-2.08□□□□□ -2.74
Ccdc39Q9D5Y1 Gm25867-201ENSMUST00000158254 103 ntBASIC-2.09□□□□□ -2.74
Ccdc39Q9D5Y1 Gm26231-201ENSMUST00000175218 67 ntBASIC-2.1□□□□□ -2.75
Ccdc39Q9D5Y1 Mir124a-1-201ENSMUST00000083663 85 ntBASIC-2.11□□□□□ -2.75
Ccdc39Q9D5Y1 Gm20473-201ENSMUST00000173064 112 ntBASIC-2.12□□□□□ -2.75
Ccdc39Q9D5Y1 Mir6395-201ENSMUST00000183885 91 ntBASIC-2.13□□□□□ -2.75
Ccdc39Q9D5Y1 Gm22183-201ENSMUST00000175420 73 ntBASIC-2.14□□□□□ -2.75
Retrieved 100 of 76,532 protein–RNA pairs in 213.3 ms