Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gm23653-201ENSMUST00000116751 97 ntBASIC-3.65□□□□□ -2.99
Ccdc43Q9CR29 Mir467e-201ENSMUST00000103760 87 ntBASIC-3.67□□□□□ -3
Ccdc43Q9CR29 Gm24586-201ENSMUST00000116695 89 ntBASIC-3.67□□□□□ -3
Ccdc43Q9CR29 Gm24226-201ENSMUST00000158826 97 ntBASIC-3.67□□□□□ -3
Ccdc43Q9CR29 Gm23787-201ENSMUST00000122538 73 ntBASIC-3.68□□□□□ -3
Ccdc43Q9CR29 Gm26139-201ENSMUST00000180098 107 ntBASIC-3.68□□□□□ -3
Ccdc43Q9CR29 Gm22573-201ENSMUST00000082982 102 ntBASIC-3.68□□□□□ -3
Ccdc43Q9CR29 Gm25681-201ENSMUST00000083938 106 ntBASIC-3.68□□□□□ -3
Ccdc43Q9CR29 Gm25905-201ENSMUST00000158490 101 ntBASIC-3.69□□□□□ -3
Ccdc43Q9CR29 Gm22879-201ENSMUST00000082895 74 ntBASIC-3.69□□□□□ -3
Ccdc43Q9CR29 Gm23707-201ENSMUST00000104366 125 ntBASIC-3.7□□□□□ -3
Ccdc43Q9CR29 Gm22232-201ENSMUST00000104654 94 ntBASIC-3.7□□□□□ -3
Ccdc43Q9CR29 Gm23566-201ENSMUST00000174907 108 ntBASIC-3.7□□□□□ -3
Ccdc43Q9CR29 Gm24185-201ENSMUST00000122578 105 ntBASIC-3.71□□□□□ -3
Ccdc43Q9CR29 Gm24502-201ENSMUST00000158453 105 ntBASIC-3.71□□□□□ -3
Ccdc43Q9CR29 Gm25022-201ENSMUST00000102205 83 ntBASIC-3.72□□□□□ -3
Ccdc43Q9CR29 Mir467a-6-201ENSMUST00000177790 83 ntBASIC-3.72□□□□□ -3
Ccdc43Q9CR29 Mir467a-3-201ENSMUST00000178082 83 ntBASIC-3.72□□□□□ -3
Ccdc43Q9CR29 Mir467a-7-201ENSMUST00000178635 83 ntBASIC-3.72□□□□□ -3
Ccdc43Q9CR29 Mir467a-10-201ENSMUST00000179320 83 ntBASIC-3.72□□□□□ -3
Ccdc43Q9CR29 Mir467a-5-201ENSMUST00000179352 83 ntBASIC-3.72□□□□□ -3
Ccdc43Q9CR29 Mir467a-2-201ENSMUST00000179447 83 ntBASIC-3.72□□□□□ -3
Ccdc43Q9CR29 Mir467a-9-201ENSMUST00000179752 83 ntBASIC-3.72□□□□□ -3
Ccdc43Q9CR29 Mir467a-4-201ENSMUST00000179923 83 ntBASIC-3.72□□□□□ -3
Ccdc43Q9CR29 Mir467a-8-201ENSMUST00000180070 83 ntBASIC-3.72□□□□□ -3
Ccdc43Q9CR29 Gm23293-201ENSMUST00000082552 104 ntBASIC-3.73□□□□□ -3.01
Ccdc43Q9CR29 Gm24410-201ENSMUST00000083433 107 ntBASIC-3.74□□□□□ -3.01
Ccdc43Q9CR29 Gm23785-201ENSMUST00000116741 96 ntBASIC-3.76□□□□□ -3.01
Ccdc43Q9CR29 Gm26052-201ENSMUST00000104646 84 ntBASIC-3.77□□□□□ -3.01
Ccdc43Q9CR29 Gm25382-201ENSMUST00000157811 97 ntBASIC-3.77□□□□□ -3.01
Ccdc43Q9CR29 Mir485-201ENSMUST00000093620 73 ntBASIC-3.77□□□□□ -3.01
Ccdc43Q9CR29 Gm44932-201ENSMUST00000206799 121 ntBASIC-3.78□□□□□ -3.01
Ccdc43Q9CR29 Gm23315-201ENSMUST00000158003 109 ntBASIC-3.79□□□□□ -3.02
Ccdc43Q9CR29 Gm22039-201ENSMUST00000157278 132 ntBASIC-3.82□□□□□ -3.02
Ccdc43Q9CR29 Gm25465-201ENSMUST00000157716 105 ntBASIC-3.87□□□□□ -3.03
Ccdc43Q9CR29 Gm23543-201ENSMUST00000158207 106 ntBASIC-3.88□□□□□ -3.03
Ccdc43Q9CR29 Gm22402-201ENSMUST00000174920 110 ntBASIC-3.88□□□□□ -3.03
Ccdc43Q9CR29 Mir7670-201ENSMUST00000183689 69 ntBASIC-3.89□□□□□ -3.03
Ccdc43Q9CR29 Gm23556-201ENSMUST00000157821 92 ntBASIC-3.9□□□□□ -3.03
Ccdc43Q9CR29 Gm22679-201ENSMUST00000116975 100 ntBASIC-3.91□□□□□ -3.04
Ccdc43Q9CR29 Gm44481-201ENSMUST00000197288 84 ntBASIC-3.95□□□□□ -3.04
Ccdc43Q9CR29 mt-Tl2-201ENSMUST00000082417 71 ntBASIC-3.96□□□□□ -3.04
Ccdc43Q9CR29 Mir1955-201ENSMUST00000158014 98 ntBASIC-3.98□□□□□ -3.05
Ccdc43Q9CR29 Gm24016-201ENSMUST00000157726 68 ntBASIC-4□□□□□ -3.05
Ccdc43Q9CR29 Gm44385-201ENSMUST00000198781 81 ntBASIC-4.03□□□□□ -3.05
Ccdc43Q9CR29 Mir335-201ENSMUST00000083567 98 ntBASIC-4.04□□□□□ -3.06
Ccdc43Q9CR29 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC-4.05□□□□□ -3.06
Ccdc43Q9CR29 Gm23428-201ENSMUST00000122488 102 ntBASIC-4.07□□□□□ -3.06
Ccdc43Q9CR29 Gm23066-201ENSMUST00000158237 71 ntBASIC-4.07□□□□□ -3.06
Ccdc43Q9CR29 Gm24710-201ENSMUST00000175235 101 ntBASIC-4.08□□□□□ -3.06
Ccdc43Q9CR29 Gm24135-201ENSMUST00000179085 101 ntBASIC-4.08□□□□□ -3.06
Ccdc43Q9CR29 Gm22056-201ENSMUST00000083386 81 ntBASIC-4.08□□□□□ -3.06
Ccdc43Q9CR29 Gm24631-201ENSMUST00000122765 81 ntBASIC-4.09□□□□□ -3.06
Ccdc43Q9CR29 Gm24538-201ENSMUST00000082612 107 ntBASIC-4.09□□□□□ -3.06
Ccdc43Q9CR29 Gm24651-201ENSMUST00000157107 107 ntBASIC-4.11□□□□□ -3.07
Ccdc43Q9CR29 Gm26231-201ENSMUST00000175218 67 ntBASIC-4.11□□□□□ -3.07
Ccdc43Q9CR29 Mir125b-1-201ENSMUST00000175613 77 ntBASIC-4.11□□□□□ -3.07
Ccdc43Q9CR29 Gm44339-201ENSMUST00000200598 84 ntBASIC-4.14□□□□□ -3.07
Ccdc43Q9CR29 Gm22296-201ENSMUST00000083310 103 ntBASIC-4.14□□□□□ -3.07
Ccdc43Q9CR29 Gm22078-201ENSMUST00000157593 103 ntBASIC-4.16□□□□□ -3.08
Ccdc43Q9CR29 Gm27995-201ENSMUST00000184402 100 ntBASIC-4.18□□□□□ -3.08
Ccdc43Q9CR29 Gm25222-201ENSMUST00000158199 126 ntBASIC-4.19□□□□□ -3.08
Ccdc43Q9CR29 Gm22260-201ENSMUST00000178643 107 ntBASIC-4.19□□□□□ -3.08
Ccdc43Q9CR29 Mir6395-201ENSMUST00000183885 91 ntBASIC-4.23□□□□□ -3.09
Ccdc43Q9CR29 Mir669a-3-201ENSMUST00000102074 109 ntBASIC-4.25□□□□□ -3.09
Ccdc43Q9CR29 Mir466l-201ENSMUST00000104866 121 ntBASIC-4.29□□□□□ -3.1
Ccdc43Q9CR29 Mir34c-201ENSMUST00000083653 77 ntBASIC-4.3□□□□□ -3.1
Ccdc43Q9CR29 Gm26307-201ENSMUST00000157767 126 ntBASIC-4.31□□□□□ -3.1
Ccdc43Q9CR29 Gm22474-201ENSMUST00000179407 107 ntBASIC-4.32□□□□□ -3.1
Ccdc43Q9CR29 Mir493-201ENSMUST00000103837 83 ntBASIC-4.36□□□□□ -3.11
Ccdc43Q9CR29 Gm22401-201ENSMUST00000174927 117 ntBASIC-4.37□□□□□ -3.11
Ccdc43Q9CR29 Gm25297-201ENSMUST00000175490 67 ntBASIC-4.37□□□□□ -3.11
Ccdc43Q9CR29 Mir351-201ENSMUST00000083569 99 ntBASIC-4.4□□□□□ -3.11
Ccdc43Q9CR29 Gm22925-201ENSMUST00000174956 102 ntBASIC-4.44□□□□□ -3.12
Ccdc43Q9CR29 Mir2136-201ENSMUST00000158781 75 ntBASIC-4.47□□□□□ -3.13
Ccdc43Q9CR29 Mir664-201ENSMUST00000196796 69 ntBASIC-4.47□□□□□ -3.13
Ccdc43Q9CR29 Gm25705-201ENSMUST00000083119 104 ntBASIC-4.5□□□□□ -3.13
Ccdc43Q9CR29 Gm27882-201ENSMUST00000184904 74 ntBASIC-4.57□□□□□ -3.14
Ccdc43Q9CR29 Mir154-201ENSMUST00000083514 66 ntBASIC-4.57□□□□□ -3.14
Ccdc43Q9CR29 Gm23961-201ENSMUST00000104685 97 ntBASIC-4.66□□□□□ -3.16
Ccdc43Q9CR29 Snord58b-201ENSMUST00000082937 66 ntBASIC-4.66□□□□□ -3.16
Ccdc43Q9CR29 Mir1912-201ENSMUST00000175298 87 ntBASIC-4.68□□□□□ -3.16
Ccdc43Q9CR29 Mir1906-1-201ENSMUST00000122586 80 ntBASIC-4.7□□□□□ -3.16
Ccdc43Q9CR29 Mir1906-2-201ENSMUST00000122610 80 ntBASIC-4.7□□□□□ -3.16
Ccdc43Q9CR29 Gm23676-201ENSMUST00000157314 105 ntBASIC-4.71□□□□□ -3.16
Ccdc43Q9CR29 Gm24396-201ENSMUST00000116905 93 ntBASIC-4.73□□□□□ -3.17
Ccdc43Q9CR29 Gm23826-201ENSMUST00000157394 119 ntBASIC-4.73□□□□□ -3.17
Ccdc43Q9CR29 Mir124a-1-201ENSMUST00000083663 85 ntBASIC-4.75□□□□□ -3.17
Ccdc43Q9CR29 Gm25354-201ENSMUST00000179110 105 ntBASIC-4.77□□□□□ -3.17
Ccdc43Q9CR29 Gm26227-201ENSMUST00000082510 101 ntBASIC-4.77□□□□□ -3.17
Ccdc43Q9CR29 Gm25524-201ENSMUST00000101821 107 ntBASIC-4.78□□□□□ -3.17
Ccdc43Q9CR29 n-R5s155-201ENSMUST00000122531 113 ntBASIC-4.79□□□□□ -3.18
Ccdc43Q9CR29 Gm22071-201ENSMUST00000116857 83 ntBASIC-4.81□□□□□ -3.18
Ccdc43Q9CR29 Gm22127-201ENSMUST00000083239 106 ntBASIC-4.83□□□□□ -3.18
Ccdc43Q9CR29 Gm22067-201ENSMUST00000122790 107 ntBASIC-4.86□□□□□ -3.19
Ccdc43Q9CR29 Gm25867-201ENSMUST00000158254 103 ntBASIC-4.86□□□□□ -3.19
Ccdc43Q9CR29 Gm22301-201ENSMUST00000082656 107 ntBASIC-4.91□□□□□ -3.2
Ccdc43Q9CR29 Mir466b-2-201ENSMUST00000103778 82 ntBASIC-4.96□□□□□ -3.2
Ccdc43Q9CR29 Gm23237-201ENSMUST00000104639 92 ntBASIC-4.96□□□□□ -3.2
Ccdc43Q9CR29 Gm26008-201ENSMUST00000158797 99 ntBASIC-4.99□□□□□ -3.21
Retrieved 100 of 76,532 protein–RNA pairs in 203.8 ms