Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm26131-201ENSMUST00000082725 110 ntBASIC-0.93□□□□□ -2.56
Nkx6-1Q99MA9 Mir302c-201ENSMUST00000083548 68 ntBASIC-0.93□□□□□ -2.56
Nkx6-1Q99MA9 Gm23166-201ENSMUST00000157164 101 ntBASIC-0.94□□□□□ -2.56
Nkx6-1Q99MA9 Mir6961-201ENSMUST00000183874 67 ntBASIC-0.94□□□□□ -2.56
Nkx6-1Q99MA9 Gm27935-201ENSMUST00000183894 79 ntBASIC-0.94□□□□□ -2.56
Nkx6-1Q99MA9 Gm22056-201ENSMUST00000083386 81 ntBASIC-0.94□□□□□ -2.56
Nkx6-1Q99MA9 Gm25905-201ENSMUST00000158490 101 ntBASIC-0.95□□□□□ -2.56
Nkx6-1Q99MA9 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-0.96□□□□□ -2.56
Nkx6-1Q99MA9 Gm24108-201ENSMUST00000175495 77 ntBASIC-0.96□□□□□ -2.56
Nkx6-1Q99MA9 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-0.96□□□□□ -2.56
Nkx6-1Q99MA9 Gm24673-201ENSMUST00000116948 124 ntBASIC-0.98□□□□□ -2.57
Nkx6-1Q99MA9 Gm23108-201ENSMUST00000178295 124 ntBASIC-0.98□□□□□ -2.57
Nkx6-1Q99MA9 Gm22566-201ENSMUST00000175541 85 ntBASIC-0.99□□□□□ -2.57
Nkx6-1Q99MA9 AC122210.2-201ENSMUST00000220216 115 ntBASIC-0.99□□□□□ -2.57
Nkx6-1Q99MA9 Gm26125-201ENSMUST00000083357 107 ntBASIC-1□□□□□ -2.57
Nkx6-1Q99MA9 Gm22385-201ENSMUST00000158189 101 ntBASIC-1.02□□□□□ -2.57
Nkx6-1Q99MA9 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.03□□□□□ -2.57
Nkx6-1Q99MA9 Gm23613-201ENSMUST00000082596 87 ntBASIC-1.03□□□□□ -2.57
Nkx6-1Q99MA9 Gm22602-201ENSMUST00000157596 95 ntBASIC-1.04□□□□□ -2.58
Nkx6-1Q99MA9 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.04□□□□□ -2.58
Nkx6-1Q99MA9 Gm23199-201ENSMUST00000158812 107 ntBASIC-1.05□□□□□ -2.58
Nkx6-1Q99MA9 Gm23811-201ENSMUST00000175155 84 ntBASIC-1.05□□□□□ -2.58
Nkx6-1Q99MA9 Gm23216-201ENSMUST00000179545 107 ntBASIC-1.07□□□□□ -2.58
Nkx6-1Q99MA9 Gm22301-201ENSMUST00000082656 107 ntBASIC-1.07□□□□□ -2.58
Nkx6-1Q99MA9 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.08□□□□□ -2.58
Nkx6-1Q99MA9 AC160976.1-201ENSMUST00000215092 148 ntBASIC-1.08□□□□□ -2.58
Nkx6-1Q99MA9 Mir7055-201ENSMUST00000197423 59 ntBASIC-1.11□□□□□ -2.59
Nkx6-1Q99MA9 Mir28c-201ENSMUST00000200096 75 ntBASIC-1.11□□□□□ -2.59
Nkx6-1Q99MA9 Gm26043-201ENSMUST00000116912 91 ntBASIC-1.12□□□□□ -2.59
Nkx6-1Q99MA9 Mir6339-201ENSMUST00000185120 117 ntBASIC-1.12□□□□□ -2.59
Nkx6-1Q99MA9 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.13□□□□□ -2.59
Nkx6-1Q99MA9 Gm24051-201ENSMUST00000158622 75 ntBASIC-1.13□□□□□ -2.59
Nkx6-1Q99MA9 Gm43943-201ENSMUST00000204201 113 ntBASIC-1.14□□□□□ -2.59
Nkx6-1Q99MA9 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.14□□□□□ -2.59
Nkx6-1Q99MA9 Snord123-201ENSMUST00000158692 71 ntBASIC-1.15□□□□□ -2.59
Nkx6-1Q99MA9 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.17□□□□□ -2.6
Nkx6-1Q99MA9 Gm26306-201ENSMUST00000157773 119 ntBASIC-1.18□□□□□ -2.6
Nkx6-1Q99MA9 Mir192-201ENSMUST00000083589 89 ntBASIC-1.22□□□□□ -2.6
Nkx6-1Q99MA9 Gm22550-201ENSMUST00000179774 107 ntBASIC-1.25□□□□□ -2.61
Nkx6-1Q99MA9 Gm26227-201ENSMUST00000082510 101 ntBASIC-1.25□□□□□ -2.61
Nkx6-1Q99MA9 Gm22060-201ENSMUST00000082558 107 ntBASIC-1.25□□□□□ -2.61
Nkx6-1Q99MA9 Gm24646-201ENSMUST00000157109 99 ntBASIC-1.26□□□□□ -2.61
Nkx6-1Q99MA9 Gm26472-201ENSMUST00000116760 83 ntBASIC-1.27□□□□□ -2.61
Nkx6-1Q99MA9 Gm23315-201ENSMUST00000158003 109 ntBASIC-1.28□□□□□ -2.61
Nkx6-1Q99MA9 Mir543-201ENSMUST00000102286 76 ntBASIC-1.31□□□□□ -2.62
Nkx6-1Q99MA9 Gm25132-201ENSMUST00000082652 107 ntBASIC-1.31□□□□□ -2.62
Nkx6-1Q99MA9 Gm25143-201ENSMUST00000082696 109 ntBASIC-1.31□□□□□ -2.62
Nkx6-1Q99MA9 Gm24502-201ENSMUST00000158453 105 ntBASIC-1.33□□□□□ -2.62
Nkx6-1Q99MA9 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.35□□□□□ -2.63
Nkx6-1Q99MA9 n-R5s155-201ENSMUST00000122531 113 ntBASIC-1.36□□□□□ -2.63
Nkx6-1Q99MA9 Gm23751-201ENSMUST00000157583 136 ntBASIC-1.37□□□□□ -2.63
Nkx6-1Q99MA9 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.37□□□□□ -2.63
Nkx6-1Q99MA9 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.37□□□□□ -2.63
Nkx6-1Q99MA9 Gm24531-201ENSMUST00000157945 100 ntBASIC-1.4□□□□□ -2.63
Nkx6-1Q99MA9 Gm27366-201ENSMUST00000184967 108 ntBASIC-1.41□□□□□ -2.64
Nkx6-1Q99MA9 Mir539-201ENSMUST00000102109 74 ntBASIC-1.42□□□□□ -2.64
Nkx6-1Q99MA9 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.44□□□□□ -2.64
Nkx6-1Q99MA9 Gm22232-201ENSMUST00000104654 94 ntBASIC-1.45□□□□□ -2.64
Nkx6-1Q99MA9 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.45□□□□□ -2.64
Nkx6-1Q99MA9 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.47□□□□□ -2.64
Nkx6-1Q99MA9 Gm22313-201ENSMUST00000158008 129 ntBASIC-1.49□□□□□ -2.65
Nkx6-1Q99MA9 Gm24194-201ENSMUST00000116805 90 ntBASIC-1.5□□□□□ -2.65
Nkx6-1Q99MA9 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.51□□□□□ -2.65
Nkx6-1Q99MA9 Gm22783-201ENSMUST00000104089 107 ntBASIC-1.52□□□□□ -2.65
Nkx6-1Q99MA9 Gm22925-201ENSMUST00000174956 102 ntBASIC-1.52□□□□□ -2.65
Nkx6-1Q99MA9 Snord58b-201ENSMUST00000082937 66 ntBASIC-1.52□□□□□ -2.65
Nkx6-1Q99MA9 Gm23637-201ENSMUST00000175075 94 ntBASIC-1.53□□□□□ -2.65
Nkx6-1Q99MA9 Gm23556-201ENSMUST00000157821 92 ntBASIC-1.54□□□□□ -2.66
Nkx6-1Q99MA9 Gm22464-201ENSMUST00000175273 64 ntBASIC-1.54□□□□□ -2.66
Nkx6-1Q99MA9 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-1.56□□□□□ -2.66
Nkx6-1Q99MA9 Gm23543-201ENSMUST00000158207 106 ntBASIC-1.6□□□□□ -2.67
Nkx6-1Q99MA9 Mir335-201ENSMUST00000083567 98 ntBASIC-1.6□□□□□ -2.67
Nkx6-1Q99MA9 Mir122-201ENSMUST00000083468 66 ntBASIC-1.65□□□□□ -2.67
Nkx6-1Q99MA9 Gm44377-201ENSMUST00000199039 87 ntBASIC-1.66□□□□□ -2.68
Nkx6-1Q99MA9 Mir669m-2-201ENSMUST00000158355 98 ntBASIC-1.71□□□□□ -2.68
Nkx6-1Q99MA9 Gm44351-201ENSMUST00000200090 95 ntBASIC-1.71□□□□□ -2.68
Nkx6-1Q99MA9 Gm22573-201ENSMUST00000082982 102 ntBASIC-1.73□□□□□ -2.69
Nkx6-1Q99MA9 Gm20473-201ENSMUST00000173064 112 ntBASIC-1.76□□□□□ -2.69
Nkx6-1Q99MA9 Mir351-201ENSMUST00000083569 99 ntBASIC-1.76□□□□□ -2.69
Nkx6-1Q99MA9 Mir664-201ENSMUST00000196796 69 ntBASIC-1.85□□□□□ -2.71
Nkx6-1Q99MA9 Mir379-201ENSMUST00000083564 66 ntBASIC-1.85□□□□□ -2.71
Nkx6-1Q99MA9 Gm25886-201ENSMUST00000157780 114 ntBASIC-1.87□□□□□ -2.71
Nkx6-1Q99MA9 Gm44303-201ENSMUST00000196348 83 ntBASIC-1.87□□□□□ -2.71
Nkx6-1Q99MA9 Gm24387-201ENSMUST00000104625 90 ntBASIC-1.89□□□□□ -2.71
Nkx6-1Q99MA9 Mir7681-201ENSMUST00000184834 72 ntBASIC-1.92□□□□□ -2.72
Nkx6-1Q99MA9 Gm23566-201ENSMUST00000174907 108 ntBASIC-1.95□□□□□ -2.72
Nkx6-1Q99MA9 Gm22593-201ENSMUST00000104245 109 ntBASIC-1.96□□□□□ -2.72
Nkx6-1Q99MA9 Gm22183-201ENSMUST00000175420 73 ntBASIC-1.96□□□□□ -2.72
Nkx6-1Q99MA9 Gm24538-201ENSMUST00000082612 107 ntBASIC-1.97□□□□□ -2.72
Nkx6-1Q99MA9 Gm25297-201ENSMUST00000175490 67 ntBASIC-2.03□□□□□ -2.73
Nkx6-1Q99MA9 Gm24806-201ENSMUST00000117036 90 ntBASIC-2.05□□□□□ -2.74
Nkx6-1Q99MA9 Gm26122-201ENSMUST00000083362 82 ntBASIC-2.08□□□□□ -2.74
Nkx6-1Q99MA9 Mir297a-3-201ENSMUST00000103768 102 ntBASIC-2.1□□□□□ -2.75
Nkx6-1Q99MA9 Gm22296-201ENSMUST00000083310 103 ntBASIC-2.1□□□□□ -2.75
Nkx6-1Q99MA9 Mir466o-201ENSMUST00000104832 84 ntBASIC-2.11□□□□□ -2.75
Nkx6-1Q99MA9 Mir467e-201ENSMUST00000103760 87 ntBASIC-2.12□□□□□ -2.75
Nkx6-1Q99MA9 Mir470-201ENSMUST00000093565 75 ntBASIC-2.12□□□□□ -2.75
Nkx6-1Q99MA9 Mir485-201ENSMUST00000093620 73 ntBASIC-2.13□□□□□ -2.75
Nkx6-1Q99MA9 Gm23428-201ENSMUST00000122488 102 ntBASIC-2.14□□□□□ -2.75
Nkx6-1Q99MA9 Gm25049-201ENSMUST00000158597 73 ntBASIC-2.15□□□□□ -2.75
Retrieved 100 of 76,532 protein–RNA pairs in 177 ms