Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm23812-201ENSMUST00000175156 84 ntBASIC-1.3□□□□□ -2.62
Vps53Q8CCB4 Gm23374-201ENSMUST00000175408 84 ntBASIC-1.3□□□□□ -2.62
Vps53Q8CCB4 Gm23613-201ENSMUST00000082596 87 ntBASIC-1.3□□□□□ -2.62
Vps53Q8CCB4 Mir6964-201ENSMUST00000200252 59 ntBASIC-1.31□□□□□ -2.62
Vps53Q8CCB4 Gm26043-201ENSMUST00000116912 91 ntBASIC-1.32□□□□□ -2.62
Vps53Q8CCB4 Gm24651-201ENSMUST00000157107 107 ntBASIC-1.33□□□□□ -2.62
Vps53Q8CCB4 Gm24197-201ENSMUST00000175085 109 ntBASIC-1.33□□□□□ -2.62
Vps53Q8CCB4 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-1.33□□□□□ -2.62
Vps53Q8CCB4 Mir6339-201ENSMUST00000185120 117 ntBASIC-1.34□□□□□ -2.62
Vps53Q8CCB4 Mir28c-201ENSMUST00000200096 75 ntBASIC-1.35□□□□□ -2.63
Vps53Q8CCB4 AC154832.1-201ENSMUST00000228928 141 ntBASIC-1.36□□□□□ -2.63
Vps53Q8CCB4 Mir125b-1-201ENSMUST00000175613 77 ntBASIC-1.37□□□□□ -2.63
Vps53Q8CCB4 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.37□□□□□ -2.63
Vps53Q8CCB4 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.37□□□□□ -2.63
Vps53Q8CCB4 Gm22056-201ENSMUST00000083386 81 ntBASIC-1.37□□□□□ -2.63
Vps53Q8CCB4 Mir192-201ENSMUST00000083589 89 ntBASIC-1.37□□□□□ -2.63
Vps53Q8CCB4 Gm22260-201ENSMUST00000178643 107 ntBASIC-1.38□□□□□ -2.63
Vps53Q8CCB4 Gm25705-201ENSMUST00000083119 104 ntBASIC-1.38□□□□□ -2.63
Vps53Q8CCB4 Snord8-201ENSMUST00000175303 110 ntBASIC-1.39□□□□□ -2.63
Vps53Q8CCB4 Gm22127-201ENSMUST00000083239 106 ntBASIC-1.39□□□□□ -2.63
Vps53Q8CCB4 Gm24459-201ENSMUST00000082730 86 ntBASIC-1.41□□□□□ -2.64
Vps53Q8CCB4 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.43□□□□□ -2.64
Vps53Q8CCB4 Mir539-201ENSMUST00000102109 74 ntBASIC-1.46□□□□□ -2.64
Vps53Q8CCB4 Gm27944-201ENSMUST00000185155 103 ntBASIC-1.47□□□□□ -2.64
Vps53Q8CCB4 n-R5s153-201ENSMUST00000083451 116 ntBASIC-1.5□□□□□ -2.65
Vps53Q8CCB4 Gm23315-201ENSMUST00000158003 109 ntBASIC-1.51□□□□□ -2.65
Vps53Q8CCB4 Gm26259-201ENSMUST00000104778 97 ntBASIC-1.52□□□□□ -2.65
Vps53Q8CCB4 Gm26472-201ENSMUST00000116760 83 ntBASIC-1.52□□□□□ -2.65
Vps53Q8CCB4 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.52□□□□□ -2.65
Vps53Q8CCB4 Gm22464-201ENSMUST00000175273 64 ntBASIC-1.53□□□□□ -2.65
Vps53Q8CCB4 Gm24646-201ENSMUST00000157109 99 ntBASIC-1.54□□□□□ -2.66
Vps53Q8CCB4 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-1.56□□□□□ -2.66
Vps53Q8CCB4 Gm25143-201ENSMUST00000082696 109 ntBASIC-1.56□□□□□ -2.66
Vps53Q8CCB4 Gm27366-201ENSMUST00000184967 108 ntBASIC-1.57□□□□□ -2.66
Vps53Q8CCB4 Gm22783-201ENSMUST00000104089 107 ntBASIC-1.59□□□□□ -2.66
Vps53Q8CCB4 Gm24502-201ENSMUST00000158453 105 ntBASIC-1.59□□□□□ -2.66
Vps53Q8CCB4 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.6□□□□□ -2.67
Vps53Q8CCB4 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.62□□□□□ -2.67
Vps53Q8CCB4 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.62□□□□□ -2.67
Vps53Q8CCB4 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.62□□□□□ -2.67
Vps53Q8CCB4 Gm22301-201ENSMUST00000082656 107 ntBASIC-1.62□□□□□ -2.67
Vps53Q8CCB4 Gm22313-201ENSMUST00000158008 129 ntBASIC-1.64□□□□□ -2.67
Vps53Q8CCB4 Mir122-201ENSMUST00000083468 66 ntBASIC-1.64□□□□□ -2.67
Vps53Q8CCB4 Mir379-201ENSMUST00000083564 66 ntBASIC-1.66□□□□□ -2.68
Vps53Q8CCB4 Gm26227-201ENSMUST00000082510 101 ntBASIC-1.68□□□□□ -2.68
Vps53Q8CCB4 Gm22232-201ENSMUST00000104654 94 ntBASIC-1.71□□□□□ -2.68
Vps53Q8CCB4 Gm22550-201ENSMUST00000179774 107 ntBASIC-1.73□□□□□ -2.69
Vps53Q8CCB4 Gm22060-201ENSMUST00000082558 107 ntBASIC-1.73□□□□□ -2.69
Vps53Q8CCB4 Gm23543-201ENSMUST00000158207 106 ntBASIC-1.76□□□□□ -2.69
Vps53Q8CCB4 Gm22446-201ENSMUST00000180108 104 ntBASIC-1.78□□□□□ -2.69
Vps53Q8CCB4 Gm22573-201ENSMUST00000082982 102 ntBASIC-1.78□□□□□ -2.69
Vps53Q8CCB4 Gm25132-201ENSMUST00000082652 107 ntBASIC-1.79□□□□□ -2.7
Vps53Q8CCB4 Gm26306-201ENSMUST00000157773 119 ntBASIC-1.8□□□□□ -2.7
Vps53Q8CCB4 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-1.82□□□□□ -2.7
Vps53Q8CCB4 Gm23556-201ENSMUST00000157821 92 ntBASIC-1.82□□□□□ -2.7
Vps53Q8CCB4 Mir7086-201ENSMUST00000183683 65 ntBASIC-1.85□□□□□ -2.71
Vps53Q8CCB4 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.86□□□□□ -2.71
Vps53Q8CCB4 Gm22925-201ENSMUST00000174956 102 ntBASIC-1.86□□□□□ -2.71
Vps53Q8CCB4 Snord58b-201ENSMUST00000082937 66 ntBASIC-1.86□□□□□ -2.71
Vps53Q8CCB4 Gm26122-201ENSMUST00000083362 82 ntBASIC-1.93□□□□□ -2.72
Vps53Q8CCB4 Gm23335-201ENSMUST00000117021 90 ntBASIC-1.95□□□□□ -2.72
Vps53Q8CCB4 Mir297a-3-201ENSMUST00000103768 102 ntBASIC-1.96□□□□□ -2.72
Vps53Q8CCB4 Gm24194-201ENSMUST00000116805 90 ntBASIC-1.97□□□□□ -2.72
Vps53Q8CCB4 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.99□□□□□ -2.73
Vps53Q8CCB4 Gm24806-201ENSMUST00000117036 90 ntBASIC-2.01□□□□□ -2.73
Vps53Q8CCB4 Gm26125-201ENSMUST00000083357 107 ntBASIC-2.05□□□□□ -2.74
Vps53Q8CCB4 Mir466o-201ENSMUST00000104832 84 ntBASIC-2.06□□□□□ -2.74
Vps53Q8CCB4 Gm23428-201ENSMUST00000122488 102 ntBASIC-2.06□□□□□ -2.74
Vps53Q8CCB4 AC160976.1-201ENSMUST00000215092 148 ntBASIC-2.08□□□□□ -2.74
Vps53Q8CCB4 Mir470-201ENSMUST00000093565 75 ntBASIC-2.09□□□□□ -2.74
Vps53Q8CCB4 Gm24387-201ENSMUST00000104625 90 ntBASIC-2.1□□□□□ -2.75
Vps53Q8CCB4 Mir664-201ENSMUST00000196796 69 ntBASIC-2.1□□□□□ -2.75
Vps53Q8CCB4 Gm24016-201ENSMUST00000157726 68 ntBASIC-2.11□□□□□ -2.75
Vps53Q8CCB4 Gm22296-201ENSMUST00000083310 103 ntBASIC-2.14□□□□□ -2.75
Vps53Q8CCB4 Gm24531-201ENSMUST00000157945 100 ntBASIC-2.15□□□□□ -2.75
Vps53Q8CCB4 Mir669m-2-201ENSMUST00000158355 98 ntBASIC-2.15□□□□□ -2.75
Vps53Q8CCB4 Gm23707-201ENSMUST00000104366 125 ntBASIC-2.17□□□□□ -2.76
Vps53Q8CCB4 Gm24185-201ENSMUST00000122578 105 ntBASIC-2.19□□□□□ -2.76
Vps53Q8CCB4 Mir7670-201ENSMUST00000183689 69 ntBASIC-2.21□□□□□ -2.76
Vps53Q8CCB4 Mir7681-201ENSMUST00000184834 72 ntBASIC-2.21□□□□□ -2.76
Vps53Q8CCB4 Mir7218-201ENSMUST00000200050 59 ntBASIC-2.22□□□□□ -2.76
Vps53Q8CCB4 Mir485-201ENSMUST00000093620 73 ntBASIC-2.22□□□□□ -2.76
Vps53Q8CCB4 Mir493-201ENSMUST00000103837 83 ntBASIC-2.23□□□□□ -2.77
Vps53Q8CCB4 Gm44303-201ENSMUST00000196348 83 ntBASIC-2.23□□□□□ -2.77
Vps53Q8CCB4 Gm22385-201ENSMUST00000158189 101 ntBASIC-2.26□□□□□ -2.77
Vps53Q8CCB4 Gm24631-201ENSMUST00000122765 81 ntBASIC-2.27□□□□□ -2.77
Vps53Q8CCB4 Gm44377-201ENSMUST00000199039 87 ntBASIC-2.27□□□□□ -2.77
Vps53Q8CCB4 Gm23751-201ENSMUST00000157583 136 ntBASIC-2.28□□□□□ -2.77
Vps53Q8CCB4 Gm44351-201ENSMUST00000200090 95 ntBASIC-2.28□□□□□ -2.77
Vps53Q8CCB4 Gm20473-201ENSMUST00000173064 112 ntBASIC-2.29□□□□□ -2.78
Vps53Q8CCB4 Gm23421-201ENSMUST00000158934 104 ntBASIC-2.3□□□□□ -2.78
Vps53Q8CCB4 Mir467e-201ENSMUST00000103760 87 ntBASIC-2.32□□□□□ -2.78
Vps53Q8CCB4 Mir466b-2-201ENSMUST00000103778 82 ntBASIC-2.33□□□□□ -2.78
Vps53Q8CCB4 Gm23066-201ENSMUST00000158237 71 ntBASIC-2.37□□□□□ -2.79
Vps53Q8CCB4 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-2.38□□□□□ -2.79
Vps53Q8CCB4 Gm22183-201ENSMUST00000175420 73 ntBASIC-2.38□□□□□ -2.79
Vps53Q8CCB4 Gm26231-201ENSMUST00000175218 67 ntBASIC-2.4□□□□□ -2.79
Vps53Q8CCB4 Gm22402-201ENSMUST00000174920 110 ntBASIC-2.42□□□□□ -2.8
Vps53Q8CCB4 Mir124a-1-201ENSMUST00000083663 85 ntBASIC-2.42□□□□□ -2.8
Vps53Q8CCB4 Gm23566-201ENSMUST00000174907 108 ntBASIC-2.43□□□□□ -2.8
Retrieved 100 of 76,532 protein–RNA pairs in 165 ms