Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.28□□□□□ -2.61
Ift88Q61371 Gm23108-201ENSMUST00000178295 124 ntBASIC-1.28□□□□□ -2.61
Ift88Q61371 Gm44347-201ENSMUST00000199602 108 ntBASIC-1.28□□□□□ -2.61
Ift88Q61371 Gm23787-201ENSMUST00000122538 73 ntBASIC-1.3□□□□□ -2.62
Ift88Q61371 Gm23421-201ENSMUST00000158934 104 ntBASIC-1.3□□□□□ -2.62
Ift88Q61371 Mir466q-201ENSMUST00000175249 76 ntBASIC-1.3□□□□□ -2.62
Ift88Q61371 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.31□□□□□ -2.62
Ift88Q61371 Gm24710-201ENSMUST00000175235 101 ntBASIC-1.31□□□□□ -2.62
Ift88Q61371 Gm24135-201ENSMUST00000179085 101 ntBASIC-1.31□□□□□ -2.62
Ift88Q61371 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.31□□□□□ -2.62
Ift88Q61371 Gm22401-201ENSMUST00000174927 117 ntBASIC-1.32□□□□□ -2.62
Ift88Q61371 Gm26125-201ENSMUST00000083357 107 ntBASIC-1.32□□□□□ -2.62
Ift88Q61371 Gm23811-201ENSMUST00000175155 84 ntBASIC-1.34□□□□□ -2.62
Ift88Q61371 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.34□□□□□ -2.62
Ift88Q61371 Mir7218-201ENSMUST00000200050 59 ntBASIC-1.34□□□□□ -2.62
Ift88Q61371 Mir669a-3-201ENSMUST00000102074 109 ntBASIC-1.37□□□□□ -2.63
Ift88Q61371 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-1.37□□□□□ -2.63
Ift88Q61371 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.37□□□□□ -2.63
Ift88Q61371 Gm22474-201ENSMUST00000179407 107 ntBASIC-1.38□□□□□ -2.63
Ift88Q61371 Gm22602-201ENSMUST00000157596 95 ntBASIC-1.39□□□□□ -2.63
Ift88Q61371 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.39□□□□□ -2.63
Ift88Q61371 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.39□□□□□ -2.63
Ift88Q61371 Mir1955-201ENSMUST00000158014 98 ntBASIC-1.4□□□□□ -2.63
Ift88Q61371 Gm25950-201ENSMUST00000175331 100 ntBASIC-1.41□□□□□ -2.64
Ift88Q61371 Mir192-201ENSMUST00000083589 89 ntBASIC-1.41□□□□□ -2.64
Ift88Q61371 Gm25222-201ENSMUST00000158199 126 ntBASIC-1.43□□□□□ -2.64
Ift88Q61371 Gm25524-201ENSMUST00000101821 107 ntBASIC-1.44□□□□□ -2.64
Ift88Q61371 Gm22385-201ENSMUST00000158189 101 ntBASIC-1.45□□□□□ -2.64
Ift88Q61371 Mir28c-201ENSMUST00000200096 75 ntBASIC-1.46□□□□□ -2.64
Ift88Q61371 Gm22464-201ENSMUST00000175273 64 ntBASIC-1.5□□□□□ -2.65
Ift88Q61371 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.52□□□□□ -2.65
Ift88Q61371 Gm27366-201ENSMUST00000184967 108 ntBASIC-1.52□□□□□ -2.65
Ift88Q61371 Gm24651-201ENSMUST00000157107 107 ntBASIC-1.54□□□□□ -2.66
Ift88Q61371 Gm22566-201ENSMUST00000175541 85 ntBASIC-1.55□□□□□ -2.66
Ift88Q61371 Gm26472-201ENSMUST00000116760 83 ntBASIC-1.56□□□□□ -2.66
Ift88Q61371 Gm22056-201ENSMUST00000083386 81 ntBASIC-1.56□□□□□ -2.66
Ift88Q61371 Mir539-201ENSMUST00000102109 74 ntBASIC-1.57□□□□□ -2.66
Ift88Q61371 Gm22783-201ENSMUST00000104089 107 ntBASIC-1.57□□□□□ -2.66
Ift88Q61371 Mir125b-1-201ENSMUST00000175613 77 ntBASIC-1.57□□□□□ -2.66
Ift88Q61371 Gm23961-201ENSMUST00000104685 97 ntBASIC-1.58□□□□□ -2.66
Ift88Q61371 Gm22260-201ENSMUST00000178643 107 ntBASIC-1.59□□□□□ -2.66
Ift88Q61371 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.6□□□□□ -2.67
Ift88Q61371 Gm25143-201ENSMUST00000082696 109 ntBASIC-1.61□□□□□ -2.67
Ift88Q61371 Gm23315-201ENSMUST00000158003 109 ntBASIC-1.62□□□□□ -2.67
Ift88Q61371 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.62□□□□□ -2.67
Ift88Q61371 Gm24646-201ENSMUST00000157109 99 ntBASIC-1.65□□□□□ -2.67
Ift88Q61371 Gm24502-201ENSMUST00000158453 105 ntBASIC-1.65□□□□□ -2.67
Ift88Q61371 Gm23751-201ENSMUST00000157583 136 ntBASIC-1.67□□□□□ -2.68
Ift88Q61371 Gm22313-201ENSMUST00000158008 129 ntBASIC-1.69□□□□□ -2.68
Ift88Q61371 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.7□□□□□ -2.68
Ift88Q61371 Gm25905-201ENSMUST00000158490 101 ntBASIC-1.71□□□□□ -2.68
Ift88Q61371 Gm22127-201ENSMUST00000083239 106 ntBASIC-1.71□□□□□ -2.68
Ift88Q61371 Gm22232-201ENSMUST00000104654 94 ntBASIC-1.76□□□□□ -2.69
Ift88Q61371 Mir122-201ENSMUST00000083468 66 ntBASIC-1.76□□□□□ -2.69
Ift88Q61371 Mir379-201ENSMUST00000083564 66 ntBASIC-1.81□□□□□ -2.7
Ift88Q61371 Gm22573-201ENSMUST00000082982 102 ntBASIC-1.82□□□□□ -2.7
Ift88Q61371 Gm23556-201ENSMUST00000157821 92 ntBASIC-1.83□□□□□ -2.7
Ift88Q61371 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-1.84□□□□□ -2.7
Ift88Q61371 Gm26259-201ENSMUST00000104778 97 ntBASIC-1.86□□□□□ -2.71
Ift88Q61371 Gm23637-201ENSMUST00000175075 94 ntBASIC-1.86□□□□□ -2.71
Ift88Q61371 Gm23543-201ENSMUST00000158207 106 ntBASIC-1.87□□□□□ -2.71
Ift88Q61371 Gm22301-201ENSMUST00000082656 107 ntBASIC-1.87□□□□□ -2.71
Ift88Q61371 Gm26227-201ENSMUST00000082510 101 ntBASIC-1.88□□□□□ -2.71
Ift88Q61371 Gm44377-201ENSMUST00000199039 87 ntBASIC-1.89□□□□□ -2.71
Ift88Q61371 Gm22925-201ENSMUST00000174956 102 ntBASIC-1.94□□□□□ -2.72
Ift88Q61371 Gm22550-201ENSMUST00000179774 107 ntBASIC-1.95□□□□□ -2.72
Ift88Q61371 Gm44351-201ENSMUST00000200090 95 ntBASIC-1.95□□□□□ -2.72
Ift88Q61371 Gm22060-201ENSMUST00000082558 107 ntBASIC-1.95□□□□□ -2.72
Ift88Q61371 Gm24806-201ENSMUST00000117036 90 ntBASIC-2.01□□□□□ -2.73
Ift88Q61371 Gm25705-201ENSMUST00000083119 104 ntBASIC-2.01□□□□□ -2.73
Ift88Q61371 Mir335-201ENSMUST00000083567 98 ntBASIC-2.01□□□□□ -2.73
Ift88Q61371 Gm26122-201ENSMUST00000083362 82 ntBASIC-2.02□□□□□ -2.73
Ift88Q61371 Gm25132-201ENSMUST00000082652 107 ntBASIC-2.03□□□□□ -2.73
Ift88Q61371 Snord58b-201ENSMUST00000082937 66 ntBASIC-2.04□□□□□ -2.74
Ift88Q61371 Mir297a-3-201ENSMUST00000103768 102 ntBASIC-2.05□□□□□ -2.74
Ift88Q61371 Gm23707-201ENSMUST00000104366 125 ntBASIC-2.11□□□□□ -2.75
Ift88Q61371 Mir664-201ENSMUST00000196796 69 ntBASIC-2.11□□□□□ -2.75
Ift88Q61371 n-R5s155-201ENSMUST00000122531 113 ntBASIC-2.12□□□□□ -2.75
Ift88Q61371 Gm26306-201ENSMUST00000157773 119 ntBASIC-2.12□□□□□ -2.75
Ift88Q61371 Gm22296-201ENSMUST00000083310 103 ntBASIC-2.13□□□□□ -2.75
Ift88Q61371 Gm23428-201ENSMUST00000122488 102 ntBASIC-2.14□□□□□ -2.75
Ift88Q61371 Gm24194-201ENSMUST00000116805 90 ntBASIC-2.16□□□□□ -2.76
Ift88Q61371 Gm24185-201ENSMUST00000122578 105 ntBASIC-2.17□□□□□ -2.76
Ift88Q61371 Gm22183-201ENSMUST00000175420 73 ntBASIC-2.18□□□□□ -2.76
Ift88Q61371 Gm23566-201ENSMUST00000174907 108 ntBASIC-2.19□□□□□ -2.76
Ift88Q61371 Mir351-201ENSMUST00000083569 99 ntBASIC-2.21□□□□□ -2.76
Ift88Q61371 Mir466o-201ENSMUST00000104832 84 ntBASIC-2.22□□□□□ -2.76
Ift88Q61371 Mir470-201ENSMUST00000093565 75 ntBASIC-2.22□□□□□ -2.76
Ift88Q61371 Gm24016-201ENSMUST00000157726 68 ntBASIC-2.24□□□□□ -2.77
Ift88Q61371 Gm24387-201ENSMUST00000104625 90 ntBASIC-2.27□□□□□ -2.77
Ift88Q61371 Gm24538-201ENSMUST00000082612 107 ntBASIC-2.27□□□□□ -2.77
Ift88Q61371 Mir669m-2-201ENSMUST00000158355 98 ntBASIC-2.28□□□□□ -2.77
Ift88Q61371 Gm24631-201ENSMUST00000122765 81 ntBASIC-2.29□□□□□ -2.78
Ift88Q61371 Mir493-201ENSMUST00000103837 83 ntBASIC-2.3□□□□□ -2.78
Ift88Q61371 Mir7670-201ENSMUST00000183689 69 ntBASIC-2.32□□□□□ -2.78
Ift88Q61371 Mir7681-201ENSMUST00000184834 72 ntBASIC-2.32□□□□□ -2.78
Ift88Q61371 Gm23066-201ENSMUST00000158237 71 ntBASIC-2.34□□□□□ -2.78
Ift88Q61371 Gm44303-201ENSMUST00000196348 83 ntBASIC-2.38□□□□□ -2.79
Ift88Q61371 Gm25297-201ENSMUST00000175490 67 ntBASIC-2.39□□□□□ -2.79
Ift88Q61371 Mir485-201ENSMUST00000093620 73 ntBASIC-2.4□□□□□ -2.79
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms