Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 AC108945.1-201ENSMUST00000226477 94 ntBASIC-6.8□□□□□ -3.5
Ccdc88bQ4QRL3 Gm22836-201ENSMUST00000158441 61 ntBASIC-6.81□□□□□ -3.5
Ccdc88bQ4QRL3 Mir669p-2-201ENSMUST00000103868 87 ntBASIC-6.82□□□□□ -3.5
Ccdc88bQ4QRL3 Mir669p-1-201ENSMUST00000103884 87 ntBASIC-6.82□□□□□ -3.5
Ccdc88bQ4QRL3 Gm23961-201ENSMUST00000104685 97 ntBASIC-6.82□□□□□ -3.5
Ccdc88bQ4QRL3 AC160962.3-201ENSMUST00000225914 112 ntBASIC-6.84□□□□□ -3.5
Ccdc88bQ4QRL3 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC-6.86□□□□□ -3.51
Ccdc88bQ4QRL3 Gm25397-201ENSMUST00000176951 92 ntBASIC-6.87□□□□□ -3.51
Ccdc88bQ4QRL3 Gm23248-201ENSMUST00000083367 108 ntBASIC-6.94□□□□□ -3.52
Ccdc88bQ4QRL3 Gm26401-201ENSMUST00000158502 76 ntBASIC-6.98□□□□□ -3.53
Ccdc88bQ4QRL3 Gm25132-201ENSMUST00000082652 107 ntBASIC-7.03□□□□□ -3.53
Ccdc88bQ4QRL3 mt-Tr-201ENSMUST00000082412 68 ntBASIC-7.04□□□□□ -3.54
Ccdc88bQ4QRL3 Gm23293-201ENSMUST00000082552 104 ntBASIC-7.09□□□□□ -3.54
Ccdc88bQ4QRL3 Gm37845-201ENSMUST00000194977 355 ntBASIC-7.11□□□□□ -3.55
Ccdc88bQ4QRL3 Gm23977-201ENSMUST00000177871 74 ntBASIC-7.14□□□□□ -3.55
Ccdc88bQ4QRL3 Gm23864-201ENSMUST00000177607 107 ntBASIC-7.16□□□□□ -3.56
Ccdc88bQ4QRL3 Gm25380-201ENSMUST00000175463 107 ntBASIC-7.19□□□□□ -3.56
Ccdc88bQ4QRL3 Gm24641-201ENSMUST00000178055 107 ntBASIC-7.19□□□□□ -3.56
Ccdc88bQ4QRL3 Gm25484-201ENSMUST00000178217 107 ntBASIC-7.19□□□□□ -3.56
Ccdc88bQ4QRL3 Gm26138-201ENSMUST00000179236 107 ntBASIC-7.19□□□□□ -3.56
Ccdc88bQ4QRL3 Gm22821-201ENSMUST00000179288 107 ntBASIC-7.19□□□□□ -3.56
Ccdc88bQ4QRL3 Gm23298-201ENSMUST00000083181 107 ntBASIC-7.19□□□□□ -3.56
Ccdc88bQ4QRL3 Gm25516-201ENSMUST00000083857 107 ntBASIC-7.19□□□□□ -3.56
Ccdc88bQ4QRL3 Gm22679-201ENSMUST00000116975 100 ntBASIC-7.22□□□□□ -3.56
Ccdc88bQ4QRL3 mt-Tl2-201ENSMUST00000082417 71 ntBASIC-7.22□□□□□ -3.56
Ccdc88bQ4QRL3 Gm25524-201ENSMUST00000101821 107 ntBASIC-7.23□□□□□ -3.57
Ccdc88bQ4QRL3 Gm25049-201ENSMUST00000158597 73 ntBASIC-7.24□□□□□ -3.57
Ccdc88bQ4QRL3 Gm23644-201ENSMUST00000157856 77 ntBASIC-7.24□□□□□ -3.57
Ccdc88bQ4QRL3 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC-7.26□□□□□ -3.57
Ccdc88bQ4QRL3 Gm26412-201ENSMUST00000157666 55 ntBASIC-7.31□□□□□ -3.58
Ccdc88bQ4QRL3 Gm28724-201ENSMUST00000186149 625 ntBASIC-7.31□□□□□ -3.58
Ccdc88bQ4QRL3 Gm25401-201ENSMUST00000082975 106 ntBASIC-7.34□□□□□ -3.58
Ccdc88bQ4QRL3 Gm25565-201ENSMUST00000104605 105 ntBASIC-7.4□□□□□ -3.59
Ccdc88bQ4QRL3 Gm22213-201ENSMUST00000157564 119 ntBASIC-7.42□□□□□ -3.6
Ccdc88bQ4QRL3 Gm25382-201ENSMUST00000157811 97 ntBASIC-7.42□□□□□ -3.6
Ccdc88bQ4QRL3 Snord50a-201ENSMUST00000178154 72 ntBASIC-7.43□□□□□ -3.6
Ccdc88bQ4QRL3 Gm24463-201ENSMUST00000178417 72 ntBASIC-7.43□□□□□ -3.6
Ccdc88bQ4QRL3 Gm24234-201ENSMUST00000104316 107 ntBASIC-7.43□□□□□ -3.6
Ccdc88bQ4QRL3 Gm20473-201ENSMUST00000173064 112 ntBASIC-7.44□□□□□ -3.6
Ccdc88bQ4QRL3 Gm44322-201ENSMUST00000196830 115 ntBASIC-7.5□□□□□ -3.61
Ccdc88bQ4QRL3 Mir6375-201ENSMUST00000197176 95 ntBASIC-7.51□□□□□ -3.61
Ccdc88bQ4QRL3 Gm26259-201ENSMUST00000104778 97 ntBASIC-7.52□□□□□ -3.61
Ccdc88bQ4QRL3 Gm23652-201ENSMUST00000116752 107 ntBASIC-7.53□□□□□ -3.61
Ccdc88bQ4QRL3 Gm22251-201ENSMUST00000083216 107 ntBASIC-7.54□□□□□ -3.62
Ccdc88bQ4QRL3 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC-7.57□□□□□ -3.62
Ccdc88bQ4QRL3 Gm20734-201ENSMUST00000216939 193 ntBASIC-7.59□□□□□ -3.62
Ccdc88bQ4QRL3 Gm24001-201ENSMUST00000158463 85 ntBASIC-7.6□□□□□ -3.63
Ccdc88bQ4QRL3 Mir450b-201ENSMUST00000102095 82 ntBASIC-7.61□□□□□ -3.63
Ccdc88bQ4QRL3 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC-7.62□□□□□ -3.63
Ccdc88bQ4QRL3 Gm22845-201ENSMUST00000157712 104 ntBASIC-7.68□□□□□ -3.64
Ccdc88bQ4QRL3 Gm22621-201ENSMUST00000179678 74 ntBASIC-7.68□□□□□ -3.64
Ccdc88bQ4QRL3 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC-7.71□□□□□ -3.64
Ccdc88bQ4QRL3 Gm23038-201ENSMUST00000083873 104 ntBASIC-7.73□□□□□ -3.65
Ccdc88bQ4QRL3 Gm24396-201ENSMUST00000116905 93 ntBASIC-7.78□□□□□ -3.65
Ccdc88bQ4QRL3 AC161426.1-201ENSMUST00000214137 286 ntBASIC-7.78□□□□□ -3.65
Ccdc88bQ4QRL3 Gm24676-201ENSMUST00000158758 75 ntBASIC-7.86□□□□□ -3.67
Ccdc88bQ4QRL3 Gm25007-201ENSMUST00000083808 133 ntBASIC-7.89□□□□□ -3.67
Ccdc88bQ4QRL3 Gm22258-201ENSMUST00000177645 94 ntBASIC-7.91□□□□□ -3.68
Ccdc88bQ4QRL3 Gm26032-201ENSMUST00000178535 94 ntBASIC-7.91□□□□□ -3.68
Ccdc88bQ4QRL3 Gm25210-201ENSMUST00000178813 94 ntBASIC-7.91□□□□□ -3.68
Ccdc88bQ4QRL3 Gm25157-201ENSMUST00000178914 94 ntBASIC-7.91□□□□□ -3.68
Ccdc88bQ4QRL3 Gm22046-201ENSMUST00000179027 94 ntBASIC-7.91□□□□□ -3.68
Ccdc88bQ4QRL3 Gm22941-201ENSMUST00000179630 94 ntBASIC-7.91□□□□□ -3.68
Ccdc88bQ4QRL3 Gm25471-201ENSMUST00000180126 94 ntBASIC-7.91□□□□□ -3.68
Ccdc88bQ4QRL3 Gm28925-201ENSMUST00000188586 168 ntBASIC-7.91□□□□□ -3.68
Ccdc88bQ4QRL3 Gm22950-201ENSMUST00000082776 107 ntBASIC-7.91□□□□□ -3.68
Ccdc88bQ4QRL3 Mir34c-201ENSMUST00000083653 77 ntBASIC-7.94□□□□□ -3.68
Ccdc88bQ4QRL3 Gm25022-201ENSMUST00000102205 83 ntBASIC-8□□□□□ -3.69
Ccdc88bQ4QRL3 Mir467a-6-201ENSMUST00000177790 83 ntBASIC-8□□□□□ -3.69
Ccdc88bQ4QRL3 Mir467a-3-201ENSMUST00000178082 83 ntBASIC-8□□□□□ -3.69
Ccdc88bQ4QRL3 Mir467a-7-201ENSMUST00000178635 83 ntBASIC-8□□□□□ -3.69
Ccdc88bQ4QRL3 Mir467a-10-201ENSMUST00000179320 83 ntBASIC-8□□□□□ -3.69
Ccdc88bQ4QRL3 Mir467a-5-201ENSMUST00000179352 83 ntBASIC-8□□□□□ -3.69
Ccdc88bQ4QRL3 Mir467a-2-201ENSMUST00000179447 83 ntBASIC-8□□□□□ -3.69
Ccdc88bQ4QRL3 Mir467a-9-201ENSMUST00000179752 83 ntBASIC-8□□□□□ -3.69
Ccdc88bQ4QRL3 Mir467a-4-201ENSMUST00000179923 83 ntBASIC-8□□□□□ -3.69
Ccdc88bQ4QRL3 Mir467a-8-201ENSMUST00000180070 83 ntBASIC-8□□□□□ -3.69
Ccdc88bQ4QRL3 Gm25135-201ENSMUST00000082648 143 ntBASIC-8□□□□□ -3.69
Ccdc88bQ4QRL3 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC-8.06□□□□□ -3.7
Ccdc88bQ4QRL3 Gm25987-201ENSMUST00000083234 107 ntBASIC-8.06□□□□□ -3.7
Ccdc88bQ4QRL3 Gm24167-201ENSMUST00000177733 124 ntBASIC-8.07□□□□□ -3.7
Ccdc88bQ4QRL3 Gm24028-201ENSMUST00000178991 124 ntBASIC-8.07□□□□□ -3.7
Ccdc88bQ4QRL3 Gm23826-201ENSMUST00000157394 119 ntBASIC-8.09□□□□□ -3.7
Ccdc88bQ4QRL3 Gm25354-201ENSMUST00000179110 105 ntBASIC-8.18□□□□□ -3.72
Ccdc88bQ4QRL3 Mir466l-201ENSMUST00000104866 121 ntBASIC-8.19□□□□□ -3.72
Ccdc88bQ4QRL3 Gm23966-201ENSMUST00000179823 107 ntBASIC-8.2□□□□□ -3.72
Ccdc88bQ4QRL3 Gm26474-201ENSMUST00000116762 122 ntBASIC-8.23□□□□□ -3.73
Ccdc88bQ4QRL3 Gm24148-201ENSMUST00000082762 80 ntBASIC-8.3□□□□□ -3.74
Ccdc88bQ4QRL3 Gm24605-201ENSMUST00000104772 96 ntBASIC-8.36□□□□□ -3.75
Ccdc88bQ4QRL3 Gm23350-201ENSMUST00000158429 103 ntBASIC-8.37□□□□□ -3.75
Ccdc88bQ4QRL3 Gm25815-201ENSMUST00000082755 107 ntBASIC-8.4□□□□□ -3.75
Ccdc88bQ4QRL3 Gm23970-201ENSMUST00000083319 107 ntBASIC-8.43□□□□□ -3.76
Ccdc88bQ4QRL3 Gm22911-201ENSMUST00000177920 107 ntBASIC-8.5□□□□□ -3.77
Ccdc88bQ4QRL3 Gm22067-201ENSMUST00000122790 107 ntBASIC-8.59□□□□□ -3.78
Ccdc88bQ4QRL3 Gm23578-201ENSMUST00000103943 104 ntBASIC-8.6□□□□□ -3.79
Ccdc88bQ4QRL3 Gm24835-201ENSMUST00000116777 111 ntBASIC-8.65□□□□□ -3.79
Ccdc88bQ4QRL3 Gm23237-201ENSMUST00000104639 92 ntBASIC-8.7□□□□□ -3.8
Ccdc88bQ4QRL3 Gm26092-201ENSMUST00000179798 97 ntBASIC-8.76□□□□□ -3.81
Ccdc88bQ4QRL3 Mir669a-1-201ENSMUST00000180238 97 ntBASIC-8.76□□□□□ -3.81
Ccdc88bQ4QRL3 Gm22593-201ENSMUST00000104245 109 ntBASIC-8.8□□□□□ -3.82
Retrieved 100 of 76,532 protein–RNA pairs in 383.8 ms