Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Gm24646-201ENSMUST00000157109 99 ntBASIC-1.2□□□□□ -2.6
Cln6Q3U466 Mir145b-201ENSMUST00000184434 75 ntBASIC-1.2□□□□□ -2.6
Cln6Q3U466 AC154832.1-201ENSMUST00000228928 141 ntBASIC-1.2□□□□□ -2.6
Cln6Q3U466 Mir7055-201ENSMUST00000197423 59 ntBASIC-1.21□□□□□ -2.6
Cln6Q3U466 Mir543-201ENSMUST00000102286 76 ntBASIC-1.22□□□□□ -2.6
Cln6Q3U466 Gm26306-201ENSMUST00000157773 119 ntBASIC-1.22□□□□□ -2.6
Cln6Q3U466 Gm22550-201ENSMUST00000179774 107 ntBASIC-1.23□□□□□ -2.61
Cln6Q3U466 Gm22060-201ENSMUST00000082558 107 ntBASIC-1.23□□□□□ -2.61
Cln6Q3U466 Mir574-201ENSMUST00000103854 78 ntBASIC-1.24□□□□□ -2.61
Cln6Q3U466 Mir539-201ENSMUST00000102109 74 ntBASIC-1.25□□□□□ -2.61
Cln6Q3U466 Gm26472-201ENSMUST00000116760 83 ntBASIC-1.25□□□□□ -2.61
Cln6Q3U466 Mir7043-201ENSMUST00000184219 70 ntBASIC-1.25□□□□□ -2.61
Cln6Q3U466 Gm25108-201ENSMUST00000122473 78 ntBASIC-1.26□□□□□ -2.61
Cln6Q3U466 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.26□□□□□ -2.61
Cln6Q3U466 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.26□□□□□ -2.61
Cln6Q3U466 AC160976.1-201ENSMUST00000215092 148 ntBASIC-1.29□□□□□ -2.62
Cln6Q3U466 Gm24502-201ENSMUST00000158453 105 ntBASIC-1.3□□□□□ -2.62
Cln6Q3U466 Gm25143-201ENSMUST00000082696 109 ntBASIC-1.3□□□□□ -2.62
Cln6Q3U466 Gm25132-201ENSMUST00000082652 107 ntBASIC-1.31□□□□□ -2.62
Cln6Q3U466 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-1.36□□□□□ -2.63
Cln6Q3U466 Gm27366-201ENSMUST00000184967 108 ntBASIC-1.36□□□□□ -2.63
Cln6Q3U466 Gm22313-201ENSMUST00000158008 129 ntBASIC-1.37□□□□□ -2.63
Cln6Q3U466 CT030166.3-201ENSMUST00000223203 193 ntBASIC-1.39□□□□□ -2.63
Cln6Q3U466 Gm23613-201ENSMUST00000082596 87 ntBASIC-1.39□□□□□ -2.63
Cln6Q3U466 Gm22464-201ENSMUST00000175273 64 ntBASIC-1.4□□□□□ -2.63
Cln6Q3U466 Gm24531-201ENSMUST00000157945 100 ntBASIC-1.41□□□□□ -2.64
Cln6Q3U466 Snord58b-201ENSMUST00000082937 66 ntBASIC-1.42□□□□□ -2.64
Cln6Q3U466 Gm22783-201ENSMUST00000104089 107 ntBASIC-1.43□□□□□ -2.64
Cln6Q3U466 Gm22232-201ENSMUST00000104654 94 ntBASIC-1.44□□□□□ -2.64
Cln6Q3U466 Mir6339-201ENSMUST00000185120 117 ntBASIC-1.44□□□□□ -2.64
Cln6Q3U466 Gm23543-201ENSMUST00000158207 106 ntBASIC-1.47□□□□□ -2.64
Cln6Q3U466 Gm26043-201ENSMUST00000116912 91 ntBASIC-1.48□□□□□ -2.65
Cln6Q3U466 Gm22925-201ENSMUST00000174956 102 ntBASIC-1.49□□□□□ -2.65
Cln6Q3U466 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-1.49□□□□□ -2.65
Cln6Q3U466 Gm25248-201ENSMUST00000175473 98 ntBASIC-1.5□□□□□ -2.65
Cln6Q3U466 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.52□□□□□ -2.65
Cln6Q3U466 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.53□□□□□ -2.65
Cln6Q3U466 Mir6964-201ENSMUST00000200252 59 ntBASIC-1.54□□□□□ -2.66
Cln6Q3U466 n-R5s153-201ENSMUST00000083451 116 ntBASIC-1.54□□□□□ -2.66
Cln6Q3U466 Gm24194-201ENSMUST00000116805 90 ntBASIC-1.55□□□□□ -2.66
Cln6Q3U466 Gm23556-201ENSMUST00000157821 92 ntBASIC-1.56□□□□□ -2.66
Cln6Q3U466 Gm22573-201ENSMUST00000082982 102 ntBASIC-1.57□□□□□ -2.66
Cln6Q3U466 Snord8-201ENSMUST00000175303 110 ntBASIC-1.59□□□□□ -2.66
Cln6Q3U466 Mir379-201ENSMUST00000083564 66 ntBASIC-1.62□□□□□ -2.67
Cln6Q3U466 Gm23812-201ENSMUST00000175156 84 ntBASIC-1.63□□□□□ -2.67
Cln6Q3U466 Gm23374-201ENSMUST00000175408 84 ntBASIC-1.63□□□□□ -2.67
Cln6Q3U466 Mir669m-2-201ENSMUST00000158355 98 ntBASIC-1.64□□□□□ -2.67
Cln6Q3U466 Gm24091-201ENSMUST00000082550 83 ntBASIC-1.64□□□□□ -2.67
Cln6Q3U466 Gm23711-201ENSMUST00000083856 83 ntBASIC-1.64□□□□□ -2.67
Cln6Q3U466 Gm27944-201ENSMUST00000185155 103 ntBASIC-1.65□□□□□ -2.67
Cln6Q3U466 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.68□□□□□ -2.68
Cln6Q3U466 Mir122-201ENSMUST00000083468 66 ntBASIC-1.7□□□□□ -2.68
Cln6Q3U466 Gm24387-201ENSMUST00000104625 90 ntBASIC-1.71□□□□□ -2.68
Cln6Q3U466 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.71□□□□□ -2.68
Cln6Q3U466 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.73□□□□□ -2.69
Cln6Q3U466 Gm24197-201ENSMUST00000175085 109 ntBASIC-1.73□□□□□ -2.69
Cln6Q3U466 Mir664-201ENSMUST00000196796 69 ntBASIC-1.73□□□□□ -2.69
Cln6Q3U466 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.75□□□□□ -2.69
Cln6Q3U466 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-1.76□□□□□ -2.69
Cln6Q3U466 Mir7681-201ENSMUST00000184834 72 ntBASIC-1.76□□□□□ -2.69
Cln6Q3U466 Gm44303-201ENSMUST00000196348 83 ntBASIC-1.76□□□□□ -2.69
Cln6Q3U466 Gm20473-201ENSMUST00000173064 112 ntBASIC-1.77□□□□□ -2.69
Cln6Q3U466 Gm26122-201ENSMUST00000083362 82 ntBASIC-1.88□□□□□ -2.71
Cln6Q3U466 Gm23428-201ENSMUST00000122488 102 ntBASIC-1.9□□□□□ -2.71
Cln6Q3U466 Gm22296-201ENSMUST00000083310 103 ntBASIC-1.92□□□□□ -2.72
Cln6Q3U466 Gm24047-201ENSMUST00000102405 104 ntBASIC-1.93□□□□□ -2.72
Cln6Q3U466 Mir297a-3-201ENSMUST00000103768 102 ntBASIC-1.93□□□□□ -2.72
Cln6Q3U466 Gm25886-201ENSMUST00000157780 114 ntBASIC-1.96□□□□□ -2.72
Cln6Q3U466 Gm22593-201ENSMUST00000104245 109 ntBASIC-1.97□□□□□ -2.72
Cln6Q3U466 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.97□□□□□ -2.72
Cln6Q3U466 Gm24806-201ENSMUST00000117036 90 ntBASIC-1.98□□□□□ -2.73
Cln6Q3U466 Mir466m-201ENSMUST00000175052 84 ntBASIC-1.99□□□□□ -2.73
Cln6Q3U466 Gm25049-201ENSMUST00000158597 73 ntBASIC-2□□□□□ -2.73
Cln6Q3U466 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-2.03□□□□□ -2.73
Cln6Q3U466 Gm24016-201ENSMUST00000157726 68 ntBASIC-2.03□□□□□ -2.73
Cln6Q3U466 Mir7086-201ENSMUST00000183683 65 ntBASIC-2.03□□□□□ -2.73
Cln6Q3U466 Mir493-201ENSMUST00000103837 83 ntBASIC-2.04□□□□□ -2.74
Cln6Q3U466 Gm23707-201ENSMUST00000104366 125 ntBASIC-2.04□□□□□ -2.74
Cln6Q3U466 Mir466b-2-201ENSMUST00000103778 82 ntBASIC-2.06□□□□□ -2.74
Cln6Q3U466 Mir466o-201ENSMUST00000104832 84 ntBASIC-2.11□□□□□ -2.75
Cln6Q3U466 Gm24185-201ENSMUST00000122578 105 ntBASIC-2.11□□□□□ -2.75
Cln6Q3U466 Mir1912-201ENSMUST00000175298 87 ntBASIC-2.11□□□□□ -2.75
Cln6Q3U466 Mir470-201ENSMUST00000093565 75 ntBASIC-2.12□□□□□ -2.75
Cln6Q3U466 Gm27935-201ENSMUST00000183894 79 ntBASIC-2.13□□□□□ -2.75
Cln6Q3U466 Gm24631-201ENSMUST00000122765 81 ntBASIC-2.15□□□□□ -2.75
Cln6Q3U466 Gm22446-201ENSMUST00000180108 104 ntBASIC-2.19□□□□□ -2.76
Cln6Q3U466 Gm25867-201ENSMUST00000158254 103 ntBASIC-2.2□□□□□ -2.76
Cln6Q3U466 Mir7670-201ENSMUST00000183689 69 ntBASIC-2.21□□□□□ -2.76
Cln6Q3U466 Gm23066-201ENSMUST00000158237 71 ntBASIC-2.25□□□□□ -2.77
Cln6Q3U466 Gm27882-201ENSMUST00000184904 74 ntBASIC-2.26□□□□□ -2.77
Cln6Q3U466 Gm26125-201ENSMUST00000083357 107 ntBASIC-2.28□□□□□ -2.77
Cln6Q3U466 Mir124a-1-201ENSMUST00000083663 85 ntBASIC-2.32□□□□□ -2.78
Cln6Q3U466 Mir485-201ENSMUST00000093620 73 ntBASIC-2.34□□□□□ -2.78
Cln6Q3U466 Gm25521-201ENSMUST00000158393 108 ntBASIC-2.35□□□□□ -2.79
Cln6Q3U466 Gm26008-201ENSMUST00000158797 99 ntBASIC-2.36□□□□□ -2.79
Cln6Q3U466 Gm26231-201ENSMUST00000175218 67 ntBASIC-2.43□□□□□ -2.8
Cln6Q3U466 Mir6395-201ENSMUST00000183885 91 ntBASIC-2.43□□□□□ -2.8
Cln6Q3U466 Mir7218-201ENSMUST00000200050 59 ntBASIC-2.44□□□□□ -2.8
Cln6Q3U466 Gm22385-201ENSMUST00000158189 101 ntBASIC-2.45□□□□□ -2.8
Cln6Q3U466 Mir467e-201ENSMUST00000103760 87 ntBASIC-2.47□□□□□ -2.8
Retrieved 100 of 76,532 protein–RNA pairs in 154.9 ms