Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm22879-201ENSMUST00000082895 74 ntBASIC-0.97□□□□□ -2.56
NcanP55066 Mir669a-3-201ENSMUST00000102074 109 ntBASIC-0.98□□□□□ -2.57
NcanP55066 Gm22385-201ENSMUST00000158189 101 ntBASIC-0.98□□□□□ -2.57
NcanP55066 Gm24710-201ENSMUST00000175235 101 ntBASIC-0.98□□□□□ -2.57
NcanP55066 Gm24135-201ENSMUST00000179085 101 ntBASIC-0.98□□□□□ -2.57
NcanP55066 Gm23216-201ENSMUST00000179545 107 ntBASIC-0.98□□□□□ -2.57
NcanP55066 Mir466q-201ENSMUST00000175249 76 ntBASIC-0.99□□□□□ -2.57
NcanP55066 Gm44347-201ENSMUST00000199602 108 ntBASIC-1□□□□□ -2.57
NcanP55066 Gm26125-201ENSMUST00000083357 107 ntBASIC-1□□□□□ -2.57
NcanP55066 Gm24673-201ENSMUST00000116948 124 ntBASIC-1.01□□□□□ -2.57
NcanP55066 Gm23108-201ENSMUST00000178295 124 ntBASIC-1.01□□□□□ -2.57
NcanP55066 Gm24097-201ENSMUST00000178720 107 ntBASIC-1.01□□□□□ -2.57
NcanP55066 Gm22474-201ENSMUST00000179407 107 ntBASIC-1.01□□□□□ -2.57
NcanP55066 Mir543-201ENSMUST00000102286 76 ntBASIC-1.02□□□□□ -2.57
NcanP55066 Gm25222-201ENSMUST00000158199 126 ntBASIC-1.02□□□□□ -2.57
NcanP55066 Gm23811-201ENSMUST00000175155 84 ntBASIC-1.02□□□□□ -2.57
NcanP55066 Gm23613-201ENSMUST00000082596 87 ntBASIC-1.03□□□□□ -2.57
NcanP55066 Mir1955-201ENSMUST00000158014 98 ntBASIC-1.04□□□□□ -2.58
NcanP55066 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.04□□□□□ -2.58
NcanP55066 Gm22602-201ENSMUST00000157596 95 ntBASIC-1.05□□□□□ -2.58
NcanP55066 Gm25524-201ENSMUST00000101821 107 ntBASIC-1.07□□□□□ -2.58
NcanP55066 n-R5s155-201ENSMUST00000122531 113 ntBASIC-1.08□□□□□ -2.58
NcanP55066 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.09□□□□□ -2.58
NcanP55066 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.09□□□□□ -2.58
NcanP55066 Mir6339-201ENSMUST00000185120 117 ntBASIC-1.1□□□□□ -2.59
NcanP55066 Mir192-201ENSMUST00000083589 89 ntBASIC-1.1□□□□□ -2.59
NcanP55066 Mir28c-201ENSMUST00000200096 75 ntBASIC-1.11□□□□□ -2.59
NcanP55066 Gm26043-201ENSMUST00000116912 91 ntBASIC-1.12□□□□□ -2.59
NcanP55066 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-1.12□□□□□ -2.59
NcanP55066 Gm23961-201ENSMUST00000104685 97 ntBASIC-1.13□□□□□ -2.59
NcanP55066 Gm24651-201ENSMUST00000157107 107 ntBASIC-1.13□□□□□ -2.59
NcanP55066 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.16□□□□□ -2.6
NcanP55066 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.18□□□□□ -2.6
NcanP55066 Gm22260-201ENSMUST00000178643 107 ntBASIC-1.18□□□□□ -2.6
NcanP55066 Gm22056-201ENSMUST00000083386 81 ntBASIC-1.18□□□□□ -2.6
NcanP55066 Mir125b-1-201ENSMUST00000175613 77 ntBASIC-1.19□□□□□ -2.6
NcanP55066 Mir539-201ENSMUST00000102109 74 ntBASIC-1.2□□□□□ -2.6
NcanP55066 Gm22464-201ENSMUST00000175273 64 ntBASIC-1.21□□□□□ -2.6
NcanP55066 Gm26472-201ENSMUST00000116760 83 ntBASIC-1.23□□□□□ -2.61
NcanP55066 Gm27366-201ENSMUST00000184967 108 ntBASIC-1.23□□□□□ -2.61
NcanP55066 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.23□□□□□ -2.61
NcanP55066 Gm23315-201ENSMUST00000158003 109 ntBASIC-1.24□□□□□ -2.61
NcanP55066 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.25□□□□□ -2.61
NcanP55066 Gm22783-201ENSMUST00000104089 107 ntBASIC-1.26□□□□□ -2.61
NcanP55066 Gm24646-201ENSMUST00000157109 99 ntBASIC-1.27□□□□□ -2.61
NcanP55066 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.27□□□□□ -2.61
NcanP55066 Gm25143-201ENSMUST00000082696 109 ntBASIC-1.28□□□□□ -2.61
NcanP55066 Gm24502-201ENSMUST00000158453 105 ntBASIC-1.3□□□□□ -2.62
NcanP55066 Gm22127-201ENSMUST00000083239 106 ntBASIC-1.3□□□□□ -2.62
NcanP55066 Gm22313-201ENSMUST00000158008 129 ntBASIC-1.32□□□□□ -2.62
NcanP55066 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.33□□□□□ -2.62
NcanP55066 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.35□□□□□ -2.63
NcanP55066 Gm22232-201ENSMUST00000104654 94 ntBASIC-1.37□□□□□ -2.63
NcanP55066 Gm26259-201ENSMUST00000104778 97 ntBASIC-1.37□□□□□ -2.63
NcanP55066 Gm26227-201ENSMUST00000082510 101 ntBASIC-1.41□□□□□ -2.64
NcanP55066 Gm22301-201ENSMUST00000082656 107 ntBASIC-1.41□□□□□ -2.64
NcanP55066 Mir122-201ENSMUST00000083468 66 ntBASIC-1.41□□□□□ -2.64
NcanP55066 Gm22573-201ENSMUST00000082982 102 ntBASIC-1.43□□□□□ -2.64
NcanP55066 Gm25705-201ENSMUST00000083119 104 ntBASIC-1.43□□□□□ -2.64
NcanP55066 Mir379-201ENSMUST00000083564 66 ntBASIC-1.43□□□□□ -2.64
NcanP55066 Gm23543-201ENSMUST00000158207 106 ntBASIC-1.45□□□□□ -2.64
NcanP55066 Gm22550-201ENSMUST00000179774 107 ntBASIC-1.46□□□□□ -2.64
NcanP55066 Gm22060-201ENSMUST00000082558 107 ntBASIC-1.46□□□□□ -2.64
NcanP55066 Gm23556-201ENSMUST00000157821 92 ntBASIC-1.48□□□□□ -2.65
NcanP55066 Gm22925-201ENSMUST00000174956 102 ntBASIC-1.51□□□□□ -2.65
NcanP55066 Gm25132-201ENSMUST00000082652 107 ntBASIC-1.54□□□□□ -2.66
NcanP55066 Snord58b-201ENSMUST00000082937 66 ntBASIC-1.55□□□□□ -2.66
NcanP55066 Gm26306-201ENSMUST00000157773 119 ntBASIC-1.57□□□□□ -2.66
NcanP55066 Gm23751-201ENSMUST00000157583 136 ntBASIC-1.59□□□□□ -2.66
NcanP55066 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-1.6□□□□□ -2.67
NcanP55066 Gm26122-201ENSMUST00000083362 82 ntBASIC-1.62□□□□□ -2.67
NcanP55066 Gm24806-201ENSMUST00000117036 90 ntBASIC-1.64□□□□□ -2.67
NcanP55066 Mir297a-3-201ENSMUST00000103768 102 ntBASIC-1.66□□□□□ -2.68
NcanP55066 Mir664-201ENSMUST00000196796 69 ntBASIC-1.67□□□□□ -2.68
NcanP55066 Gm24194-201ENSMUST00000116805 90 ntBASIC-1.68□□□□□ -2.68
NcanP55066 Gm23428-201ENSMUST00000122488 102 ntBASIC-1.69□□□□□ -2.68
NcanP55066 Gm22296-201ENSMUST00000083310 103 ntBASIC-1.7□□□□□ -2.68
NcanP55066 Gm23707-201ENSMUST00000104366 125 ntBASIC-1.72□□□□□ -2.68
NcanP55066 Gm24387-201ENSMUST00000104625 90 ntBASIC-1.73□□□□□ -2.69
NcanP55066 Mir335-201ENSMUST00000083567 98 ntBASIC-1.74□□□□□ -2.69
NcanP55066 Mir669m-2-201ENSMUST00000158355 98 ntBASIC-1.75□□□□□ -2.69
NcanP55066 Mir466o-201ENSMUST00000104832 84 ntBASIC-1.77□□□□□ -2.69
NcanP55066 Gm24185-201ENSMUST00000122578 105 ntBASIC-1.77□□□□□ -2.69
NcanP55066 Gm44377-201ENSMUST00000199039 87 ntBASIC-1.77□□□□□ -2.69
NcanP55066 Gm44351-201ENSMUST00000200090 95 ntBASIC-1.78□□□□□ -2.69
NcanP55066 Mir470-201ENSMUST00000093565 75 ntBASIC-1.78□□□□□ -2.69
NcanP55066 Gm24016-201ENSMUST00000157726 68 ntBASIC-1.79□□□□□ -2.7
NcanP55066 Gm23637-201ENSMUST00000175075 94 ntBASIC-1.8□□□□□ -2.7
NcanP55066 Mir7681-201ENSMUST00000184834 72 ntBASIC-1.8□□□□□ -2.7
NcanP55066 Mir493-201ENSMUST00000103837 83 ntBASIC-1.82□□□□□ -2.7
NcanP55066 Gm24531-201ENSMUST00000157945 100 ntBASIC-1.83□□□□□ -2.7
NcanP55066 Gm44303-201ENSMUST00000196348 83 ntBASIC-1.83□□□□□ -2.7
NcanP55066 Gm24631-201ENSMUST00000122765 81 ntBASIC-1.85□□□□□ -2.71
NcanP55066 Mir7670-201ENSMUST00000183689 69 ntBASIC-1.87□□□□□ -2.71
NcanP55066 Gm23066-201ENSMUST00000158237 71 ntBASIC-1.9□□□□□ -2.71
NcanP55066 Mir485-201ENSMUST00000093620 73 ntBASIC-1.91□□□□□ -2.72
NcanP55066 Gm20473-201ENSMUST00000173064 112 ntBASIC-1.92□□□□□ -2.72
NcanP55066 Mir351-201ENSMUST00000083569 99 ntBASIC-1.93□□□□□ -2.72
NcanP55066 Mir466b-2-201ENSMUST00000103778 82 ntBASIC-1.94□□□□□ -2.72
NcanP55066 Gm25867-201ENSMUST00000158254 103 ntBASIC-1.95□□□□□ -2.72
Retrieved 100 of 76,532 protein–RNA pairs in 270.1 ms