Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm25071-201ENSMUST00000175232 70 ntBASIC-4.83□□□□□ -3.18
HttP42859 Gm23059-201ENSMUST00000158978 107 ntBASIC-4.83□□□□□ -3.18
HttP42859 Gm26194-201ENSMUST00000175036 71 ntBASIC-4.83□□□□□ -3.18
HttP42859 Gm37746-201ENSMUST00000193249 198 ntBASIC-4.83□□□□□ -3.18
HttP42859 AC108945.1-201ENSMUST00000226477 94 ntBASIC-4.83□□□□□ -3.18
HttP42859 Gm44859-201ENSMUST00000207831 94 ntBASIC-4.84□□□□□ -3.18
HttP42859 Gm25397-201ENSMUST00000176951 92 ntBASIC-4.86□□□□□ -3.19
HttP42859 Gm25414-201ENSMUST00000101814 107 ntBASIC-4.89□□□□□ -3.19
HttP42859 Gm25401-201ENSMUST00000082975 106 ntBASIC-4.9□□□□□ -3.19
HttP42859 Gm37845-201ENSMUST00000194977 355 ntBASIC-4.94□□□□□ -3.2
HttP42859 Gm25049-201ENSMUST00000158597 73 ntBASIC-4.96□□□□□ -3.2
HttP42859 Gm26401-201ENSMUST00000158502 76 ntBASIC-4.97□□□□□ -3.2
HttP42859 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC-4.97□□□□□ -3.21
HttP42859 Gm22679-201ENSMUST00000116975 100 ntBASIC-4.98□□□□□ -3.21
HttP42859 Gm25524-201ENSMUST00000101821 107 ntBASIC-4.99□□□□□ -3.21
HttP42859 Gm25132-201ENSMUST00000082652 107 ntBASIC-5.01□□□□□ -3.21
HttP42859 Gm25380-201ENSMUST00000175463 107 ntBASIC-5.05□□□□□ -3.22
HttP42859 Gm24641-201ENSMUST00000178055 107 ntBASIC-5.05□□□□□ -3.22
HttP42859 Gm25484-201ENSMUST00000178217 107 ntBASIC-5.05□□□□□ -3.22
HttP42859 Gm26138-201ENSMUST00000179236 107 ntBASIC-5.05□□□□□ -3.22
HttP42859 Gm22821-201ENSMUST00000179288 107 ntBASIC-5.05□□□□□ -3.22
HttP42859 Gm23293-201ENSMUST00000082552 104 ntBASIC-5.05□□□□□ -3.22
HttP42859 Gm23298-201ENSMUST00000083181 107 ntBASIC-5.05□□□□□ -3.22
HttP42859 Gm25516-201ENSMUST00000083857 107 ntBASIC-5.05□□□□□ -3.22
HttP42859 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC-5.05□□□□□ -3.22
HttP42859 Gm23864-201ENSMUST00000177607 107 ntBASIC-5.08□□□□□ -3.22
HttP42859 Gm28724-201ENSMUST00000186149 625 ntBASIC-5.11□□□□□ -3.23
HttP42859 Gm26259-201ENSMUST00000104778 97 ntBASIC-5.12□□□□□ -3.23
HttP42859 Gm23977-201ENSMUST00000177871 74 ntBASIC-5.12□□□□□ -3.23
HttP42859 Gm20734-201ENSMUST00000216939 193 ntBASIC-5.12□□□□□ -3.23
HttP42859 Snord50a-201ENSMUST00000178154 72 ntBASIC-5.13□□□□□ -3.23
HttP42859 Gm24463-201ENSMUST00000178417 72 ntBASIC-5.13□□□□□ -3.23
HttP42859 mt-Tr-201ENSMUST00000082412 68 ntBASIC-5.15□□□□□ -3.23
HttP42859 Gm23644-201ENSMUST00000157856 77 ntBASIC-5.17□□□□□ -3.24
HttP42859 mt-Tl2-201ENSMUST00000082417 71 ntBASIC-5.19□□□□□ -3.24
HttP42859 Gm20473-201ENSMUST00000173064 112 ntBASIC-5.19□□□□□ -3.24
HttP42859 Gm26412-201ENSMUST00000157666 55 ntBASIC-5.2□□□□□ -3.24
HttP42859 Gm23038-201ENSMUST00000083873 104 ntBASIC-5.21□□□□□ -3.24
HttP42859 Gm44322-201ENSMUST00000196830 115 ntBASIC-5.22□□□□□ -3.25
HttP42859 Gm25565-201ENSMUST00000104605 105 ntBASIC-5.23□□□□□ -3.25
HttP42859 Gm25382-201ENSMUST00000157811 97 ntBASIC-5.23□□□□□ -3.25
HttP42859 Gm24396-201ENSMUST00000116905 93 ntBASIC-5.27□□□□□ -3.25
HttP42859 Gm22213-201ENSMUST00000157564 119 ntBASIC-5.27□□□□□ -3.25
HttP42859 Mir450b-201ENSMUST00000102095 82 ntBASIC-5.29□□□□□ -3.26
HttP42859 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC-5.29□□□□□ -3.26
HttP42859 Gm24001-201ENSMUST00000158463 85 ntBASIC-5.32□□□□□ -3.26
HttP42859 Gm23652-201ENSMUST00000116752 107 ntBASIC-5.34□□□□□ -3.26
HttP42859 AC161426.1-201ENSMUST00000214137 286 ntBASIC-5.36□□□□□ -3.27
HttP42859 Mir466l-201ENSMUST00000104866 121 ntBASIC-5.38□□□□□ -3.27
HttP42859 Gm22251-201ENSMUST00000083216 107 ntBASIC-5.4□□□□□ -3.27
HttP42859 Gm25987-201ENSMUST00000083234 107 ntBASIC-5.41□□□□□ -3.27
HttP42859 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC-5.42□□□□□ -3.28
HttP42859 Mir34c-201ENSMUST00000083653 77 ntBASIC-5.44□□□□□ -3.28
HttP42859 Gm23826-201ENSMUST00000157394 119 ntBASIC-5.44□□□□□ -3.28
HttP42859 Gm24234-201ENSMUST00000104316 107 ntBASIC-5.45□□□□□ -3.28
HttP42859 Gm22845-201ENSMUST00000157712 104 ntBASIC-5.46□□□□□ -3.28
HttP42859 Mir6375-201ENSMUST00000197176 95 ntBASIC-5.48□□□□□ -3.29
HttP42859 Gm25007-201ENSMUST00000083808 133 ntBASIC-5.49□□□□□ -3.29
HttP42859 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC-5.5□□□□□ -3.29
HttP42859 Gm25022-201ENSMUST00000102205 83 ntBASIC-5.51□□□□□ -3.29
HttP42859 Mir467a-6-201ENSMUST00000177790 83 ntBASIC-5.51□□□□□ -3.29
HttP42859 Mir467a-3-201ENSMUST00000178082 83 ntBASIC-5.51□□□□□ -3.29
HttP42859 Mir467a-7-201ENSMUST00000178635 83 ntBASIC-5.51□□□□□ -3.29
HttP42859 Mir467a-10-201ENSMUST00000179320 83 ntBASIC-5.51□□□□□ -3.29
HttP42859 Mir467a-5-201ENSMUST00000179352 83 ntBASIC-5.51□□□□□ -3.29
HttP42859 Mir467a-2-201ENSMUST00000179447 83 ntBASIC-5.51□□□□□ -3.29
HttP42859 Mir467a-9-201ENSMUST00000179752 83 ntBASIC-5.51□□□□□ -3.29
HttP42859 Mir467a-4-201ENSMUST00000179923 83 ntBASIC-5.51□□□□□ -3.29
HttP42859 Mir467a-8-201ENSMUST00000180070 83 ntBASIC-5.51□□□□□ -3.29
HttP42859 Gm22621-201ENSMUST00000179678 74 ntBASIC-5.55□□□□□ -3.3
HttP42859 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC-5.57□□□□□ -3.3
HttP42859 Gm23966-201ENSMUST00000179823 107 ntBASIC-5.63□□□□□ -3.31
HttP42859 Gm24148-201ENSMUST00000082762 80 ntBASIC-5.67□□□□□ -3.32
HttP42859 Gm24676-201ENSMUST00000158758 75 ntBASIC-5.68□□□□□ -3.32
HttP42859 Gm22258-201ENSMUST00000177645 94 ntBASIC-5.71□□□□□ -3.32
HttP42859 Gm26032-201ENSMUST00000178535 94 ntBASIC-5.71□□□□□ -3.32
HttP42859 Gm25210-201ENSMUST00000178813 94 ntBASIC-5.71□□□□□ -3.32
HttP42859 Gm25157-201ENSMUST00000178914 94 ntBASIC-5.71□□□□□ -3.32
HttP42859 Gm22046-201ENSMUST00000179027 94 ntBASIC-5.71□□□□□ -3.32
HttP42859 Gm22941-201ENSMUST00000179630 94 ntBASIC-5.71□□□□□ -3.32
HttP42859 Gm25471-201ENSMUST00000180126 94 ntBASIC-5.71□□□□□ -3.32
HttP42859 Gm24167-201ENSMUST00000177733 124 ntBASIC-5.72□□□□□ -3.33
HttP42859 Gm24028-201ENSMUST00000178991 124 ntBASIC-5.72□□□□□ -3.33
HttP42859 Gm28925-201ENSMUST00000188586 168 ntBASIC-5.73□□□□□ -3.33
HttP42859 Gm25135-201ENSMUST00000082648 143 ntBASIC-5.75□□□□□ -3.33
HttP42859 Gm22911-201ENSMUST00000177920 107 ntBASIC-5.77□□□□□ -3.33
HttP42859 Gm25815-201ENSMUST00000082755 107 ntBASIC-5.78□□□□□ -3.33
HttP42859 Gm22950-201ENSMUST00000082776 107 ntBASIC-5.8□□□□□ -3.34
HttP42859 Gm25354-201ENSMUST00000179110 105 ntBASIC-5.81□□□□□ -3.34
HttP42859 Gm23350-201ENSMUST00000158429 103 ntBASIC-5.89□□□□□ -3.35
HttP42859 Gm23970-201ENSMUST00000083319 107 ntBASIC-5.9□□□□□ -3.35
HttP42859 Gm26474-201ENSMUST00000116762 122 ntBASIC-5.96□□□□□ -3.36
HttP42859 Gm23578-201ENSMUST00000103943 104 ntBASIC-6.01□□□□□ -3.37
HttP42859 Gm22593-201ENSMUST00000104245 109 ntBASIC-6.01□□□□□ -3.37
HttP42859 Gm24605-201ENSMUST00000104772 96 ntBASIC-6.04□□□□□ -3.38
HttP42859 Gm44387-201ENSMUST00000196298 145 ntBASIC-6.12□□□□□ -3.39
HttP42859 Gm23237-201ENSMUST00000104639 92 ntBASIC-6.12□□□□□ -3.39
HttP42859 Mir6481-201ENSMUST00000184617 110 ntBASIC-6.12□□□□□ -3.39
HttP42859 Gm23852-201ENSMUST00000158376 77 ntBASIC-6.19□□□□□ -3.4
HttP42859 Gm26092-201ENSMUST00000179798 97 ntBASIC-6.21□□□□□ -3.4
Retrieved 100 of 76,532 protein–RNA pairs in 171.7 ms