Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm23904-201ENSMUST00000157567 124 ntBASIC-0.52□□□□□ -2.49
RaraP11416 Gm22602-201ENSMUST00000157596 95 ntBASIC-0.52□□□□□ -2.49
RaraP11416 Gm23811-201ENSMUST00000175155 84 ntBASIC-0.52□□□□□ -2.49
RaraP11416 Mir677-202ENSMUST00000197076 78 ntBASIC-0.52□□□□□ -2.49
RaraP11416 Gm22385-201ENSMUST00000158189 101 ntBASIC-0.53□□□□□ -2.49
RaraP11416 Gm24003-201ENSMUST00000158455 100 ntBASIC-0.54□□□□□ -2.5
RaraP11416 Gm26262-201ENSMUST00000158024 127 ntBASIC-0.55□□□□□ -2.5
RaraP11416 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-0.55□□□□□ -2.5
RaraP11416 Gm27935-201ENSMUST00000183894 79 ntBASIC-0.55□□□□□ -2.5
RaraP11416 Mir1969-201ENSMUST00000157623 94 ntBASIC-0.58□□□□□ -2.5
RaraP11416 Gm23308-201ENSMUST00000179475 107 ntBASIC-0.61□□□□□ -2.51
RaraP11416 Mir28c-201ENSMUST00000200096 75 ntBASIC-0.62□□□□□ -2.51
RaraP11416 AC122210.2-201ENSMUST00000220216 115 ntBASIC-0.62□□□□□ -2.51
RaraP11416 Gm24673-201ENSMUST00000116948 124 ntBASIC-0.63□□□□□ -2.51
RaraP11416 Gm23108-201ENSMUST00000178295 124 ntBASIC-0.63□□□□□ -2.51
RaraP11416 Gm22232-201ENSMUST00000104654 94 ntBASIC-0.64□□□□□ -2.51
RaraP11416 Gm23315-201ENSMUST00000158003 109 ntBASIC-0.65□□□□□ -2.51
RaraP11416 Mir5124b-201ENSMUST00000184251 85 ntBASIC-0.67□□□□□ -2.52
RaraP11416 Gm24714-201ENSMUST00000102382 101 ntBASIC-0.68□□□□□ -2.52
RaraP11416 Gm22938-201ENSMUST00000103956 120 ntBASIC-0.68□□□□□ -2.52
RaraP11416 Gm25601-201ENSMUST00000158356 105 ntBASIC-0.68□□□□□ -2.52
RaraP11416 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-0.68□□□□□ -2.52
RaraP11416 Gm24194-201ENSMUST00000116805 90 ntBASIC-0.69□□□□□ -2.52
RaraP11416 Gm23166-201ENSMUST00000157164 101 ntBASIC-0.69□□□□□ -2.52
RaraP11416 Gm22813-202ENSMUST00000200346 124 ntBASIC-0.71□□□□□ -2.52
RaraP11416 Gm26233-201ENSMUST00000175530 70 ntBASIC-0.72□□□□□ -2.52
RaraP11416 Gm44311-201ENSMUST00000196448 69 ntBASIC-0.74□□□□□ -2.53
RaraP11416 Mir302c-201ENSMUST00000083548 68 ntBASIC-0.75□□□□□ -2.53
RaraP11416 Gm24646-201ENSMUST00000157109 99 ntBASIC-0.76□□□□□ -2.53
RaraP11416 Gm25493-201ENSMUST00000157375 103 ntBASIC-0.76□□□□□ -2.53
RaraP11416 Mir192-201ENSMUST00000083589 89 ntBASIC-0.76□□□□□ -2.53
RaraP11416 Gm23831-201ENSMUST00000158895 85 ntBASIC-0.78□□□□□ -2.53
RaraP11416 Gm26131-201ENSMUST00000082725 110 ntBASIC-0.78□□□□□ -2.53
RaraP11416 Snord58b-201ENSMUST00000082937 66 ntBASIC-0.78□□□□□ -2.53
RaraP11416 Gm24775-201ENSMUST00000157377 99 ntBASIC-0.79□□□□□ -2.54
RaraP11416 Gm26472-201ENSMUST00000116760 83 ntBASIC-0.8□□□□□ -2.54
RaraP11416 Gm24554-201ENSMUST00000158654 73 ntBASIC-0.8□□□□□ -2.54
RaraP11416 Gm24502-201ENSMUST00000158453 105 ntBASIC-0.81□□□□□ -2.54
RaraP11416 Gm24051-201ENSMUST00000158622 75 ntBASIC-0.81□□□□□ -2.54
RaraP11416 Gm23613-201ENSMUST00000082596 87 ntBASIC-0.81□□□□□ -2.54
RaraP11416 Gm22593-201ENSMUST00000104245 109 ntBASIC-0.84□□□□□ -2.54
RaraP11416 Gm20473-201ENSMUST00000173064 112 ntBASIC-0.84□□□□□ -2.54
RaraP11416 Gm22925-201ENSMUST00000174956 102 ntBASIC-0.84□□□□□ -2.54
RaraP11416 Gm25143-201ENSMUST00000082696 109 ntBASIC-0.84□□□□□ -2.54
RaraP11416 Mir6339-201ENSMUST00000185120 117 ntBASIC-0.85□□□□□ -2.55
RaraP11416 Mir7015-201ENSMUST00000199525 64 ntBASIC-0.85□□□□□ -2.55
RaraP11416 Gm26043-201ENSMUST00000116912 91 ntBASIC-0.86□□□□□ -2.55
RaraP11416 Mir669m-2-201ENSMUST00000158355 98 ntBASIC-0.86□□□□□ -2.55
RaraP11416 Snord123-201ENSMUST00000158692 71 ntBASIC-0.89□□□□□ -2.55
RaraP11416 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-0.9□□□□□ -2.55
RaraP11416 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-0.9□□□□□ -2.55
RaraP11416 Gm43943-201ENSMUST00000204201 113 ntBASIC-0.9□□□□□ -2.55
RaraP11416 Gm24108-201ENSMUST00000175495 77 ntBASIC-0.91□□□□□ -2.56
RaraP11416 Gm23751-201ENSMUST00000157583 136 ntBASIC-0.92□□□□□ -2.56
RaraP11416 Mir539-201ENSMUST00000102109 74 ntBASIC-0.93□□□□□ -2.56
RaraP11416 Gm23974-201ENSMUST00000083321 131 ntBASIC-0.94□□□□□ -2.56
RaraP11416 Mir6961-201ENSMUST00000183874 67 ntBASIC-0.95□□□□□ -2.56
RaraP11416 Gm24704-201ENSMUST00000093715 107 ntBASIC-0.96□□□□□ -2.56
RaraP11416 Mir7055-201ENSMUST00000197423 59 ntBASIC-0.97□□□□□ -2.56
RaraP11416 Gm26124-201ENSMUST00000083359 108 ntBASIC-0.99□□□□□ -2.57
RaraP11416 Mir335-201ENSMUST00000083567 98 ntBASIC-0.99□□□□□ -2.57
RaraP11416 Gm23637-201ENSMUST00000175075 94 ntBASIC-1□□□□□ -2.57
RaraP11416 Gm22313-201ENSMUST00000158008 129 ntBASIC-1.04□□□□□ -2.58
RaraP11416 Gm23199-201ENSMUST00000158812 107 ntBASIC-1.04□□□□□ -2.58
RaraP11416 Gm44303-201ENSMUST00000196348 83 ntBASIC-1.05□□□□□ -2.58
RaraP11416 Gm23543-201ENSMUST00000158207 106 ntBASIC-1.09□□□□□ -2.58
RaraP11416 Gm24387-201ENSMUST00000104625 90 ntBASIC-1.11□□□□□ -2.59
RaraP11416 Gm27366-201ENSMUST00000184967 108 ntBASIC-1.11□□□□□ -2.59
RaraP11416 Mir351-201ENSMUST00000083569 99 ntBASIC-1.11□□□□□ -2.59
RaraP11416 Gm23556-201ENSMUST00000157821 92 ntBASIC-1.12□□□□□ -2.59
RaraP11416 Gm23216-201ENSMUST00000179545 107 ntBASIC-1.13□□□□□ -2.59
RaraP11416 Mir543-201ENSMUST00000102286 76 ntBASIC-1.14□□□□□ -2.59
RaraP11416 Mir7681-201ENSMUST00000184834 72 ntBASIC-1.14□□□□□ -2.59
RaraP11416 Gm44377-201ENSMUST00000199039 87 ntBASIC-1.15□□□□□ -2.59
RaraP11416 Gm25049-201ENSMUST00000158597 73 ntBASIC-1.18□□□□□ -2.6
RaraP11416 Gm22783-201ENSMUST00000104089 107 ntBASIC-1.22□□□□□ -2.6
RaraP11416 Gm22464-201ENSMUST00000175273 64 ntBASIC-1.25□□□□□ -2.61
RaraP11416 Gm22573-201ENSMUST00000082982 102 ntBASIC-1.25□□□□□ -2.61
RaraP11416 Mir664-201ENSMUST00000196796 69 ntBASIC-1.27□□□□□ -2.61
RaraP11416 Gm44351-201ENSMUST00000200090 95 ntBASIC-1.27□□□□□ -2.61
RaraP11416 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.28□□□□□ -2.61
RaraP11416 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.3□□□□□ -2.62
RaraP11416 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-1.31□□□□□ -2.62
RaraP11416 Gm24538-201ENSMUST00000082612 107 ntBASIC-1.38□□□□□ -2.63
RaraP11416 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.42□□□□□ -2.64
RaraP11416 Gm25297-201ENSMUST00000175490 67 ntBASIC-1.42□□□□□ -2.64
RaraP11416 Gm23566-201ENSMUST00000174907 108 ntBASIC-1.45□□□□□ -2.64
RaraP11416 Gm22183-201ENSMUST00000175420 73 ntBASIC-1.48□□□□□ -2.65
RaraP11416 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.48□□□□□ -2.65
RaraP11416 Mir379-201ENSMUST00000083564 66 ntBASIC-1.48□□□□□ -2.65
RaraP11416 Gm23676-201ENSMUST00000157314 105 ntBASIC-1.54□□□□□ -2.66
RaraP11416 Mir1912-201ENSMUST00000175298 87 ntBASIC-1.58□□□□□ -2.66
RaraP11416 Gm22296-201ENSMUST00000083310 103 ntBASIC-1.64□□□□□ -2.67
RaraP11416 Mir122-201ENSMUST00000083468 66 ntBASIC-1.64□□□□□ -2.67
RaraP11416 Gm23428-201ENSMUST00000122488 102 ntBASIC-1.65□□□□□ -2.67
RaraP11416 Mir466b-2-201ENSMUST00000103778 82 ntBASIC-1.66□□□□□ -2.68
RaraP11416 Gm26122-201ENSMUST00000083362 82 ntBASIC-1.75□□□□□ -2.69
RaraP11416 Mir493-201ENSMUST00000103837 83 ntBASIC-1.76□□□□□ -2.69
RaraP11416 Mir297a-3-201ENSMUST00000103768 102 ntBASIC-1.81□□□□□ -2.7
RaraP11416 Gm24016-201ENSMUST00000157726 68 ntBASIC-1.83□□□□□ -2.7
Retrieved 100 of 76,532 protein–RNA pairs in 170.6 ms