Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm26472-201ENSMUST00000116760 83 ntBASIC-0.24□□□□□ -2.45
Col3a1P08121 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-0.24□□□□□ -2.45
Col3a1P08121 Mir378c-201ENSMUST00000184478 99 ntBASIC-0.24□□□□□ -2.45
Col3a1P08121 Gm24502-201ENSMUST00000158453 105 ntBASIC-0.25□□□□□ -2.45
Col3a1P08121 Snord8-201ENSMUST00000175303 110 ntBASIC-0.25□□□□□ -2.45
Col3a1P08121 Gm23308-201ENSMUST00000179475 107 ntBASIC-0.26□□□□□ -2.45
Col3a1P08121 Gm25143-201ENSMUST00000082696 109 ntBASIC-0.26□□□□□ -2.45
Col3a1P08121 Gm24646-201ENSMUST00000157109 99 ntBASIC-0.27□□□□□ -2.45
Col3a1P08121 Gm25493-201ENSMUST00000157375 103 ntBASIC-0.27□□□□□ -2.45
Col3a1P08121 Gm25429-201ENSMUST00000157607 132 ntBASIC-0.27□□□□□ -2.45
Col3a1P08121 Mir7057-201ENSMUST00000184685 58 ntBASIC-0.27□□□□□ -2.45
Col3a1P08121 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-0.28□□□□□ -2.45
Col3a1P08121 AC154832.1-201ENSMUST00000228928 141 ntBASIC-0.29□□□□□ -2.46
Col3a1P08121 Mir192-201ENSMUST00000083589 89 ntBASIC-0.29□□□□□ -2.46
Col3a1P08121 Mir183-201ENSMUST00000083685 70 ntBASIC-0.29□□□□□ -2.46
Col3a1P08121 Gm23166-201ENSMUST00000157164 101 ntBASIC-0.29□□□□□ -2.46
Col3a1P08121 Gm24775-201ENSMUST00000157377 99 ntBASIC-0.3□□□□□ -2.46
Col3a1P08121 Mir5124b-201ENSMUST00000184251 85 ntBASIC-0.3□□□□□ -2.46
Col3a1P08121 Gm26233-201ENSMUST00000175530 70 ntBASIC-0.32□□□□□ -2.46
Col3a1P08121 Gm24714-201ENSMUST00000102382 101 ntBASIC-0.33□□□□□ -2.46
Col3a1P08121 Gm44303-201ENSMUST00000196348 83 ntBASIC-0.33□□□□□ -2.46
Col3a1P08121 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.34□□□□□ -2.46
Col3a1P08121 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.34□□□□□ -2.46
Col3a1P08121 Gm44311-201ENSMUST00000196448 69 ntBASIC-0.34□□□□□ -2.46
Col3a1P08121 n-R5s153-201ENSMUST00000083451 116 ntBASIC-0.35□□□□□ -2.46
Col3a1P08121 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.35□□□□□ -2.46
Col3a1P08121 Gm25049-201ENSMUST00000158597 73 ntBASIC-0.35□□□□□ -2.47
Col3a1P08121 Gm26131-201ENSMUST00000082725 110 ntBASIC-0.35□□□□□ -2.47
Col3a1P08121 Mir302c-201ENSMUST00000083548 68 ntBASIC-0.35□□□□□ -2.47
Col3a1P08121 Gm24051-201ENSMUST00000158622 75 ntBASIC-0.36□□□□□ -2.47
Col3a1P08121 Mir539-201ENSMUST00000102109 74 ntBASIC-0.37□□□□□ -2.47
Col3a1P08121 Mir7218-201ENSMUST00000200050 59 ntBASIC-0.37□□□□□ -2.47
Col3a1P08121 Gm23556-201ENSMUST00000157821 92 ntBASIC-0.38□□□□□ -2.47
Col3a1P08121 Mir3101-201ENSMUST00000175607 88 ntBASIC-0.38□□□□□ -2.47
Col3a1P08121 Gm24387-201ENSMUST00000104625 90 ntBASIC-0.39□□□□□ -2.47
Col3a1P08121 Snord123-201ENSMUST00000158692 71 ntBASIC-0.39□□□□□ -2.47
Col3a1P08121 Gm43943-201ENSMUST00000204201 113 ntBASIC-0.39□□□□□ -2.47
Col3a1P08121 Gm24108-201ENSMUST00000175495 77 ntBASIC-0.4□□□□□ -2.47
Col3a1P08121 Gm27944-201ENSMUST00000185155 103 ntBASIC-0.41□□□□□ -2.47
Col3a1P08121 Gm22813-202ENSMUST00000200346 124 ntBASIC-0.41□□□□□ -2.47
Col3a1P08121 Gm22313-201ENSMUST00000158008 129 ntBASIC-0.41□□□□□ -2.48
Col3a1P08121 Gm22566-201ENSMUST00000175541 85 ntBASIC-0.41□□□□□ -2.48
Col3a1P08121 Gm23974-201ENSMUST00000083321 131 ntBASIC-0.41□□□□□ -2.48
Col3a1P08121 Mir7681-201ENSMUST00000184834 72 ntBASIC-0.42□□□□□ -2.48
Col3a1P08121 Gm23543-201ENSMUST00000158207 106 ntBASIC-0.43□□□□□ -2.48
Col3a1P08121 Gm27366-201ENSMUST00000184967 108 ntBASIC-0.43□□□□□ -2.48
Col3a1P08121 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-0.43□□□□□ -2.48
Col3a1P08121 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-0.43□□□□□ -2.48
Col3a1P08121 Gm26124-201ENSMUST00000083359 108 ntBASIC-0.43□□□□□ -2.48
Col3a1P08121 Gm27935-201ENSMUST00000183894 79 ntBASIC-0.45□□□□□ -2.48
Col3a1P08121 Gm24704-201ENSMUST00000093715 107 ntBASIC-0.45□□□□□ -2.48
Col3a1P08121 Mir6961-201ENSMUST00000183874 67 ntBASIC-0.46□□□□□ -2.48
Col3a1P08121 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-0.46□□□□□ -2.48
Col3a1P08121 Gm23831-201ENSMUST00000158895 85 ntBASIC-0.47□□□□□ -2.48
Col3a1P08121 Mir7086-201ENSMUST00000183683 65 ntBASIC-0.47□□□□□ -2.48
Col3a1P08121 Mir543-201ENSMUST00000102286 76 ntBASIC-0.48□□□□□ -2.49
Col3a1P08121 Mir664-201ENSMUST00000196796 69 ntBASIC-0.48□□□□□ -2.49
Col3a1P08121 Gm22783-201ENSMUST00000104089 107 ntBASIC-0.49□□□□□ -2.49
Col3a1P08121 Gm23199-201ENSMUST00000158812 107 ntBASIC-0.49□□□□□ -2.49
Col3a1P08121 Gm22573-201ENSMUST00000082982 102 ntBASIC-0.5□□□□□ -2.49
Col3a1P08121 Gm22938-201ENSMUST00000103956 120 ntBASIC-0.53□□□□□ -2.49
Col3a1P08121 Gm22385-201ENSMUST00000158189 101 ntBASIC-0.53□□□□□ -2.49
Col3a1P08121 Gm22464-201ENSMUST00000175273 64 ntBASIC-0.53□□□□□ -2.49
Col3a1P08121 n-R5s155-201ENSMUST00000122531 113 ntBASIC-0.54□□□□□ -2.5
Col3a1P08121 Gm26125-201ENSMUST00000083357 107 ntBASIC-0.54□□□□□ -2.5
Col3a1P08121 Mir7055-201ENSMUST00000197423 59 ntBASIC-0.55□□□□□ -2.5
Col3a1P08121 Gm23216-201ENSMUST00000179545 107 ntBASIC-0.56□□□□□ -2.5
Col3a1P08121 Mir1912-201ENSMUST00000175298 87 ntBASIC-0.61□□□□□ -2.51
Col3a1P08121 Gm23125-201ENSMUST00000157651 106 ntBASIC-0.62□□□□□ -2.51
Col3a1P08121 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-0.62□□□□□ -2.51
Col3a1P08121 Gm25601-201ENSMUST00000158356 105 ntBASIC-0.63□□□□□ -2.51
Col3a1P08121 Gm23613-201ENSMUST00000082596 87 ntBASIC-0.65□□□□□ -2.51
Col3a1P08121 Mir379-201ENSMUST00000083564 66 ntBASIC-0.67□□□□□ -2.52
Col3a1P08121 Gm22296-201ENSMUST00000083310 103 ntBASIC-0.67□□□□□ -2.52
Col3a1P08121 Gm23316-201ENSMUST00000157997 114 ntBASIC-0.68□□□□□ -2.52
Col3a1P08121 Gm25521-201ENSMUST00000158393 108 ntBASIC-0.68□□□□□ -2.52
Col3a1P08121 Mir466b-2-201ENSMUST00000103778 82 ntBASIC-0.69□□□□□ -2.52
Col3a1P08121 Gm24554-201ENSMUST00000158654 73 ntBASIC-0.69□□□□□ -2.52
Col3a1P08121 Gm26043-201ENSMUST00000116912 91 ntBASIC-0.7□□□□□ -2.52
Col3a1P08121 Gm25626-201ENSMUST00000177631 107 ntBASIC-0.7□□□□□ -2.52
Col3a1P08121 Mir6339-201ENSMUST00000185120 117 ntBASIC-0.7□□□□□ -2.52
Col3a1P08121 Gm23428-201ENSMUST00000122488 102 ntBASIC-0.72□□□□□ -2.52
Col3a1P08121 Mir493-201ENSMUST00000103837 83 ntBASIC-0.75□□□□□ -2.53
Col3a1P08121 Gm25867-201ENSMUST00000158254 103 ntBASIC-0.75□□□□□ -2.53
Col3a1P08121 Mir7015-201ENSMUST00000199525 64 ntBASIC-0.76□□□□□ -2.53
Col3a1P08121 Gm22430-201ENSMUST00000158546 107 ntBASIC-0.77□□□□□ -2.53
Col3a1P08121 Mir122-201ENSMUST00000083468 66 ntBASIC-0.77□□□□□ -2.53
Col3a1P08121 Gm24016-201ENSMUST00000157726 68 ntBASIC-0.78□□□□□ -2.53
Col3a1P08121 Gm26122-201ENSMUST00000083362 82 ntBASIC-0.78□□□□□ -2.53
Col3a1P08121 Mir297a-3-201ENSMUST00000103768 102 ntBASIC-0.8□□□□□ -2.54
Col3a1P08121 Mir451b-201ENSMUST00000196157 72 ntBASIC-0.8□□□□□ -2.54
Col3a1P08121 Gm23707-201ENSMUST00000104366 125 ntBASIC-0.83□□□□□ -2.54
Col3a1P08121 Gm24631-201ENSMUST00000122765 81 ntBASIC-0.85□□□□□ -2.55
Col3a1P08121 Gm23751-201ENSMUST00000157583 136 ntBASIC-0.85□□□□□ -2.55
Col3a1P08121 Gm24806-201ENSMUST00000117036 90 ntBASIC-0.86□□□□□ -2.55
Col3a1P08121 Gm25254-201ENSMUST00000157239 104 ntBASIC-0.86□□□□□ -2.55
Col3a1P08121 Gm26008-201ENSMUST00000158797 99 ntBASIC-0.86□□□□□ -2.55
Col3a1P08121 Gm24185-201ENSMUST00000122578 105 ntBASIC-0.89□□□□□ -2.55
Col3a1P08121 Mir124a-1-201ENSMUST00000083663 85 ntBASIC-0.92□□□□□ -2.56
Col3a1P08121 Gm27882-201ENSMUST00000184904 74 ntBASIC-0.92□□□□□ -2.56
Retrieved 100 of 76,532 protein–RNA pairs in 8.5 ms