Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 n-R5s153-201ENSMUST00000083451 116 ntBASIC-1.33□□□□□ -2.62
Ddx28Q9CWT6 Snord123-201ENSMUST00000158692 71 ntBASIC-1.34□□□□□ -2.62
Ddx28Q9CWT6 Gm24047-201ENSMUST00000102405 104 ntBASIC-1.35□□□□□ -2.63
Ddx28Q9CWT6 Gm25652-201ENSMUST00000083780 103 ntBASIC-1.35□□□□□ -2.63
Ddx28Q9CWT6 Gm24051-201ENSMUST00000158622 75 ntBASIC-1.36□□□□□ -2.63
Ddx28Q9CWT6 Mir6339-201ENSMUST00000185120 117 ntBASIC-1.36□□□□□ -2.63
Ddx28Q9CWT6 Gm20305-201ENSMUST00000193226 177 ntBASIC-1.37□□□□□ -2.63
Ddx28Q9CWT6 Mir543-201ENSMUST00000102286 76 ntBASIC-1.38□□□□□ -2.63
Ddx28Q9CWT6 Gm22016-201ENSMUST00000158793 114 ntBASIC-1.38□□□□□ -2.63
Ddx28Q9CWT6 Snord8-201ENSMUST00000175303 110 ntBASIC-1.38□□□□□ -2.63
Ddx28Q9CWT6 Gm26043-201ENSMUST00000116912 91 ntBASIC-1.39□□□□□ -2.63
Ddx28Q9CWT6 Gm25087-201ENSMUST00000101992 78 ntBASIC-1.4□□□□□ -2.63
Ddx28Q9CWT6 Gm22095-201ENSMUST00000158984 150 ntBASIC-1.4□□□□□ -2.63
Ddx28Q9CWT6 Gm27944-201ENSMUST00000185155 103 ntBASIC-1.4□□□□□ -2.63
Ddx28Q9CWT6 AC238676.2-201ENSMUST00000220910 94 ntBASIC-1.4□□□□□ -2.63
Ddx28Q9CWT6 Gm26467-201ENSMUST00000097257 78 ntBASIC-1.4□□□□□ -2.63
Ddx28Q9CWT6 Gm24378-201ENSMUST00000122699 106 ntBASIC-1.41□□□□□ -2.64
Ddx28Q9CWT6 Gm26257-201ENSMUST00000122500 107 ntBASIC-1.42□□□□□ -2.64
Ddx28Q9CWT6 Gm25862-201ENSMUST00000158250 129 ntBASIC-1.42□□□□□ -2.64
Ddx28Q9CWT6 Gm26375-201ENSMUST00000101829 106 ntBASIC-1.43□□□□□ -2.64
Ddx28Q9CWT6 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.43□□□□□ -2.64
Ddx28Q9CWT6 Gm25429-201ENSMUST00000157607 132 ntBASIC-1.43□□□□□ -2.64
Ddx28Q9CWT6 Gm23856-201ENSMUST00000158380 99 ntBASIC-1.43□□□□□ -2.64
Ddx28Q9CWT6 Gm24203-201ENSMUST00000082949 114 ntBASIC-1.45□□□□□ -2.64
Ddx28Q9CWT6 Gm26051-201ENSMUST00000104642 93 ntBASIC-1.46□□□□□ -2.64
Ddx28Q9CWT6 Gm25648-201ENSMUST00000177844 79 ntBASIC-1.46□□□□□ -2.64
Ddx28Q9CWT6 Gm24331-201ENSMUST00000175099 67 ntBASIC-1.48□□□□□ -2.65
Ddx28Q9CWT6 Gm23801-201ENSMUST00000175561 67 ntBASIC-1.48□□□□□ -2.65
Ddx28Q9CWT6 Gm24485-201ENSMUST00000178283 67 ntBASIC-1.48□□□□□ -2.65
Ddx28Q9CWT6 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.48□□□□□ -2.65
Ddx28Q9CWT6 AC161271.1-201ENSMUST00000226914 150 ntBASIC-1.49□□□□□ -2.65
Ddx28Q9CWT6 Gm24612-201ENSMUST00000083267 107 ntBASIC-1.49□□□□□ -2.65
Ddx28Q9CWT6 Gm22679-201ENSMUST00000116975 100 ntBASIC-1.51□□□□□ -2.65
Ddx28Q9CWT6 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.51□□□□□ -2.65
Ddx28Q9CWT6 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-1.51□□□□□ -2.65
Ddx28Q9CWT6 Gm25326-201ENSMUST00000101903 107 ntBASIC-1.52□□□□□ -2.65
Ddx28Q9CWT6 Gm25382-201ENSMUST00000157811 97 ntBASIC-1.52□□□□□ -2.65
Ddx28Q9CWT6 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.54□□□□□ -2.66
Ddx28Q9CWT6 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.54□□□□□ -2.66
Ddx28Q9CWT6 Gm22746-201ENSMUST00000082494 107 ntBASIC-1.54□□□□□ -2.66
Ddx28Q9CWT6 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.55□□□□□ -2.66
Ddx28Q9CWT6 Gm23573-201ENSMUST00000104408 107 ntBASIC-1.56□□□□□ -2.66
Ddx28Q9CWT6 Gm23817-201ENSMUST00000158449 104 ntBASIC-1.56□□□□□ -2.66
Ddx28Q9CWT6 Gm23649-201ENSMUST00000179007 107 ntBASIC-1.56□□□□□ -2.66
Ddx28Q9CWT6 Gm26485-201ENSMUST00000158019 64 ntBASIC-1.57□□□□□ -2.66
Ddx28Q9CWT6 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.58□□□□□ -2.66
Ddx28Q9CWT6 Gm22965-201ENSMUST00000157958 101 ntBASIC-1.59□□□□□ -2.66
Ddx28Q9CWT6 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.59□□□□□ -2.66
Ddx28Q9CWT6 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.6□□□□□ -2.67
Ddx28Q9CWT6 Gm23293-201ENSMUST00000082552 104 ntBASIC-1.6□□□□□ -2.67
Ddx28Q9CWT6 Gm11966-201ENSMUST00000119907 87 ntBASIC-1.62□□□□□ -2.67
Ddx28Q9CWT6 Gm24459-201ENSMUST00000082730 86 ntBASIC-1.62□□□□□ -2.67
Ddx28Q9CWT6 Gm23730-201ENSMUST00000083236 107 ntBASIC-1.62□□□□□ -2.67
Ddx28Q9CWT6 Gm25183-201ENSMUST00000157752 106 ntBASIC-1.64□□□□□ -2.67
Ddx28Q9CWT6 Gm24996-201ENSMUST00000158390 99 ntBASIC-1.65□□□□□ -2.67
Ddx28Q9CWT6 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.65□□□□□ -2.67
Ddx28Q9CWT6 Gm37646-201ENSMUST00000191756 111 ntBASIC-1.65□□□□□ -2.67
Ddx28Q9CWT6 Gm24259-201ENSMUST00000083740 107 ntBASIC-1.67□□□□□ -2.68
Ddx28Q9CWT6 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.68□□□□□ -2.68
Ddx28Q9CWT6 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.68□□□□□ -2.68
Ddx28Q9CWT6 AC122210.2-201ENSMUST00000220216 115 ntBASIC-1.68□□□□□ -2.68
Ddx28Q9CWT6 Gm24673-201ENSMUST00000116948 124 ntBASIC-1.69□□□□□ -2.68
Ddx28Q9CWT6 Gm23108-201ENSMUST00000178295 124 ntBASIC-1.69□□□□□ -2.68
Ddx28Q9CWT6 Gm22357-201ENSMUST00000082882 83 ntBASIC-1.69□□□□□ -2.68
Ddx28Q9CWT6 Gm25995-201ENSMUST00000175396 142 ntBASIC-1.7□□□□□ -2.68
Ddx28Q9CWT6 Gm25903-201ENSMUST00000158492 103 ntBASIC-1.71□□□□□ -2.68
Ddx28Q9CWT6 Gm22446-201ENSMUST00000180108 104 ntBASIC-1.71□□□□□ -2.68
Ddx28Q9CWT6 AC157278.1-201ENSMUST00000221621 148 ntBASIC-1.71□□□□□ -2.68
Ddx28Q9CWT6 Gm24927-201ENSMUST00000083397 107 ntBASIC-1.71□□□□□ -2.68
Ddx28Q9CWT6 Mir367-201ENSMUST00000083479 75 ntBASIC-1.71□□□□□ -2.68
Ddx28Q9CWT6 Gm24797-201ENSMUST00000178103 107 ntBASIC-1.72□□□□□ -2.68
Ddx28Q9CWT6 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.73□□□□□ -2.69
Ddx28Q9CWT6 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.74□□□□□ -2.69
Ddx28Q9CWT6 Gm23785-201ENSMUST00000116741 96 ntBASIC-1.75□□□□□ -2.69
Ddx28Q9CWT6 Mir7086-201ENSMUST00000183683 65 ntBASIC-1.75□□□□□ -2.69
Ddx28Q9CWT6 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC-1.75□□□□□ -2.69
Ddx28Q9CWT6 Gm27450-201ENSMUST00000104632 90 ntBASIC-1.76□□□□□ -2.69
Ddx28Q9CWT6 Gm25552-201ENSMUST00000158081 91 ntBASIC-1.76□□□□□ -2.69
Ddx28Q9CWT6 Gm22464-201ENSMUST00000175273 64 ntBASIC-1.77□□□□□ -2.69
Ddx28Q9CWT6 Gm24723-201ENSMUST00000158233 132 ntBASIC-1.79□□□□□ -2.7
Ddx28Q9CWT6 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC-1.8□□□□□ -2.7
Ddx28Q9CWT6 Mir466l-201ENSMUST00000104866 121 ntBASIC-1.8□□□□□ -2.7
Ddx28Q9CWT6 Gm24297-201ENSMUST00000158300 68 ntBASIC-1.8□□□□□ -2.7
Ddx28Q9CWT6 mt-Tl2-201ENSMUST00000082417 71 ntBASIC-1.8□□□□□ -2.7
Ddx28Q9CWT6 Mir122-201ENSMUST00000083468 66 ntBASIC-1.8□□□□□ -2.7
Ddx28Q9CWT6 Gm44347-201ENSMUST00000199602 108 ntBASIC-1.81□□□□□ -2.7
Ddx28Q9CWT6 Gm24226-201ENSMUST00000158826 97 ntBASIC-1.83□□□□□ -2.7
Ddx28Q9CWT6 Gm22602-201ENSMUST00000157596 95 ntBASIC-1.85□□□□□ -2.71
Ddx28Q9CWT6 Gm26139-201ENSMUST00000180098 107 ntBASIC-1.85□□□□□ -2.71
Ddx28Q9CWT6 Gm22783-201ENSMUST00000104089 107 ntBASIC-1.86□□□□□ -2.71
Ddx28Q9CWT6 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.87□□□□□ -2.71
Ddx28Q9CWT6 Mir192-201ENSMUST00000083589 89 ntBASIC-1.87□□□□□ -2.71
Ddx28Q9CWT6 Gm24725-201ENSMUST00000158229 125 ntBASIC-1.88□□□□□ -2.71
Ddx28Q9CWT6 Gm23992-201ENSMUST00000174981 67 ntBASIC-1.88□□□□□ -2.71
Ddx28Q9CWT6 Mir34c-201ENSMUST00000083653 77 ntBASIC-1.88□□□□□ -2.71
Ddx28Q9CWT6 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-1.89□□□□□ -2.71
Ddx28Q9CWT6 Gm27366-201ENSMUST00000184967 108 ntBASIC-1.89□□□□□ -2.71
Ddx28Q9CWT6 Gm24097-201ENSMUST00000178720 107 ntBASIC-1.91□□□□□ -2.72
Ddx28Q9CWT6 Gm25023-201ENSMUST00000082977 107 ntBASIC-1.91□□□□□ -2.72
Ddx28Q9CWT6 Gm23811-201ENSMUST00000175155 84 ntBASIC-1.92□□□□□ -2.72
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms