Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC-2.87□□□□□ -2.87
Ccdc43Q9CR29 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-2.88□□□□□ -2.87
Ccdc43Q9CR29 Gm24605-201ENSMUST00000104772 96 ntBASIC-2.88□□□□□ -2.87
Ccdc43Q9CR29 Gm22842-201ENSMUST00000157709 118 ntBASIC-2.88□□□□□ -2.87
Ccdc43Q9CR29 Gm27987-201ENSMUST00000184023 93 ntBASIC-2.88□□□□□ -2.87
Ccdc43Q9CR29 Gm23573-201ENSMUST00000104408 107 ntBASIC-2.89□□□□□ -2.87
Ccdc43Q9CR29 Gm25995-201ENSMUST00000175396 142 ntBASIC-2.89□□□□□ -2.87
Ccdc43Q9CR29 Gm22729-201ENSMUST00000158088 129 ntBASIC-2.9□□□□□ -2.87
Ccdc43Q9CR29 Gm26125-201ENSMUST00000083357 107 ntBASIC-2.93□□□□□ -2.88
Ccdc43Q9CR29 Gm25903-201ENSMUST00000158492 103 ntBASIC-2.94□□□□□ -2.88
Ccdc43Q9CR29 AC238676.2-201ENSMUST00000220910 94 ntBASIC-2.95□□□□□ -2.88
Ccdc43Q9CR29 Gm25112-201ENSMUST00000122680 104 ntBASIC-2.96□□□□□ -2.88
Ccdc43Q9CR29 Gm23817-201ENSMUST00000158449 104 ntBASIC-2.96□□□□□ -2.88
Ccdc43Q9CR29 Gm24674-201ENSMUST00000179194 104 ntBASIC-2.98□□□□□ -2.89
Ccdc43Q9CR29 Gm22746-201ENSMUST00000082494 107 ntBASIC-2.98□□□□□ -2.89
Ccdc43Q9CR29 Mir7218-201ENSMUST00000200050 59 ntBASIC-2.99□□□□□ -2.89
Ccdc43Q9CR29 Gm22783-201ENSMUST00000104089 107 ntBASIC-3.02□□□□□ -2.89
Ccdc43Q9CR29 Gm26257-201ENSMUST00000122500 107 ntBASIC-3.03□□□□□ -2.89
Ccdc43Q9CR29 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC-3.03□□□□□ -2.89
Ccdc43Q9CR29 Gm23335-201ENSMUST00000117021 90 ntBASIC-3.04□□□□□ -2.9
Ccdc43Q9CR29 Gm27366-201ENSMUST00000184967 108 ntBASIC-3.04□□□□□ -2.9
Ccdc43Q9CR29 Gm25552-201ENSMUST00000158081 91 ntBASIC-3.06□□□□□ -2.9
Ccdc43Q9CR29 Gm22385-201ENSMUST00000158189 101 ntBASIC-3.06□□□□□ -2.9
Ccdc43Q9CR29 Gm23856-201ENSMUST00000158380 99 ntBASIC-3.06□□□□□ -2.9
Ccdc43Q9CR29 Gm24097-201ENSMUST00000178720 107 ntBASIC-3.07□□□□□ -2.9
Ccdc43Q9CR29 Gm22357-201ENSMUST00000082882 83 ntBASIC-3.07□□□□□ -2.9
Ccdc43Q9CR29 Gm22965-201ENSMUST00000157958 101 ntBASIC-3.08□□□□□ -2.9
Ccdc43Q9CR29 Gm25648-201ENSMUST00000177844 79 ntBASIC-3.08□□□□□ -2.9
Ccdc43Q9CR29 Gm43206-201ENSMUST00000197990 114 ntBASIC-3.08□□□□□ -2.9
Ccdc43Q9CR29 Gm25987-201ENSMUST00000083234 107 ntBASIC-3.08□□□□□ -2.9
Ccdc43Q9CR29 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC-3.09□□□□□ -2.9
Ccdc43Q9CR29 Gm20305-201ENSMUST00000193226 177 ntBASIC-3.09□□□□□ -2.9
Ccdc43Q9CR29 Gm44347-201ENSMUST00000199602 108 ntBASIC-3.09□□□□□ -2.9
Ccdc43Q9CR29 Gm24148-201ENSMUST00000082762 80 ntBASIC-3.09□□□□□ -2.9
Ccdc43Q9CR29 Gm23376-201ENSMUST00000082938 160 ntBASIC-3.09□□□□□ -2.9
Ccdc43Q9CR29 Mir192-201ENSMUST00000083589 89 ntBASIC-3.1□□□□□ -2.91
Ccdc43Q9CR29 Gm23421-201ENSMUST00000158934 104 ntBASIC-3.11□□□□□ -2.91
Ccdc43Q9CR29 Gm24495-201ENSMUST00000178575 79 ntBASIC-3.11□□□□□ -2.91
Ccdc43Q9CR29 Gm22253-201ENSMUST00000179870 79 ntBASIC-3.11□□□□□ -2.91
Ccdc43Q9CR29 Gm25023-201ENSMUST00000082977 107 ntBASIC-3.14□□□□□ -2.91
Ccdc43Q9CR29 Mir450b-201ENSMUST00000102095 82 ntBASIC-3.15□□□□□ -2.91
Ccdc43Q9CR29 Mir1950-201ENSMUST00000158526 74 ntBASIC-3.15□□□□□ -2.91
Ccdc43Q9CR29 Gm23811-201ENSMUST00000175155 84 ntBASIC-3.17□□□□□ -2.92
Ccdc43Q9CR29 Gm24331-201ENSMUST00000175099 67 ntBASIC-3.18□□□□□ -2.92
Ccdc43Q9CR29 Gm23801-201ENSMUST00000175561 67 ntBASIC-3.18□□□□□ -2.92
Ccdc43Q9CR29 Gm24485-201ENSMUST00000178283 67 ntBASIC-3.18□□□□□ -2.92
Ccdc43Q9CR29 Gm22602-201ENSMUST00000157596 95 ntBASIC-3.2□□□□□ -2.92
Ccdc43Q9CR29 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-3.21□□□□□ -2.92
Ccdc43Q9CR29 Gm23751-201ENSMUST00000157583 136 ntBASIC-3.21□□□□□ -2.92
Ccdc43Q9CR29 Gm22845-201ENSMUST00000157712 104 ntBASIC-3.21□□□□□ -2.92
Ccdc43Q9CR29 Gm23992-201ENSMUST00000174981 67 ntBASIC-3.21□□□□□ -2.92
Ccdc43Q9CR29 Gm24378-201ENSMUST00000122699 106 ntBASIC-3.22□□□□□ -2.92
Ccdc43Q9CR29 Gm22095-201ENSMUST00000158984 150 ntBASIC-3.22□□□□□ -2.92
Ccdc43Q9CR29 Mir379-201ENSMUST00000083564 66 ntBASIC-3.22□□□□□ -2.92
Ccdc43Q9CR29 Gm24259-201ENSMUST00000083740 107 ntBASIC-3.22□□□□□ -2.92
Ccdc43Q9CR29 Gm25815-201ENSMUST00000082755 107 ntBASIC-3.23□□□□□ -2.93
Ccdc43Q9CR29 Gm24996-201ENSMUST00000158390 99 ntBASIC-3.24□□□□□ -2.93
Ccdc43Q9CR29 Gm23730-201ENSMUST00000083236 107 ntBASIC-3.24□□□□□ -2.93
Ccdc43Q9CR29 Mir295-201ENSMUST00000104694 69 ntBASIC-3.26□□□□□ -2.93
Ccdc43Q9CR29 Mir466q-201ENSMUST00000175249 76 ntBASIC-3.27□□□□□ -2.93
Ccdc43Q9CR29 Gm22381-201ENSMUST00000158186 107 ntBASIC-3.28□□□□□ -2.93
Ccdc43Q9CR29 Mir539-201ENSMUST00000102109 74 ntBASIC-3.29□□□□□ -2.94
Ccdc43Q9CR29 Mir28c-201ENSMUST00000200096 75 ntBASIC-3.29□□□□□ -2.94
Ccdc43Q9CR29 Gm24297-201ENSMUST00000158300 68 ntBASIC-3.3□□□□□ -2.94
Ccdc43Q9CR29 Gm23649-201ENSMUST00000179007 107 ntBASIC-3.31□□□□□ -2.94
Ccdc43Q9CR29 Gm24723-201ENSMUST00000158233 132 ntBASIC-3.32□□□□□ -2.94
Ccdc43Q9CR29 Gm24797-201ENSMUST00000178103 107 ntBASIC-3.32□□□□□ -2.94
Ccdc43Q9CR29 Gm24806-201ENSMUST00000117036 90 ntBASIC-3.33□□□□□ -2.94
Ccdc43Q9CR29 CT571266.1-201ENSMUST00000222859 153 ntBASIC-3.33□□□□□ -2.94
Ccdc43Q9CR29 Gm44351-201ENSMUST00000200090 95 ntBASIC-3.35□□□□□ -2.95
Ccdc43Q9CR29 Gm24927-201ENSMUST00000083397 107 ntBASIC-3.35□□□□□ -2.95
Ccdc43Q9CR29 Gm23652-201ENSMUST00000116752 107 ntBASIC-3.36□□□□□ -2.95
Ccdc43Q9CR29 Gm22251-201ENSMUST00000083216 107 ntBASIC-3.36□□□□□ -2.95
Ccdc43Q9CR29 Mir1187-201ENSMUST00000116936 122 ntBASIC-3.38□□□□□ -2.95
Ccdc43Q9CR29 Gm25183-201ENSMUST00000157752 106 ntBASIC-3.41□□□□□ -2.96
Ccdc43Q9CR29 Gm22566-201ENSMUST00000175541 85 ntBASIC-3.41□□□□□ -2.96
Ccdc43Q9CR29 Gm25428-201ENSMUST00000157608 114 ntBASIC-3.42□□□□□ -2.96
Ccdc43Q9CR29 Gm26051-201ENSMUST00000104642 93 ntBASIC-3.45□□□□□ -2.96
Ccdc43Q9CR29 Gm44377-201ENSMUST00000199039 87 ntBASIC-3.45□□□□□ -2.96
Ccdc43Q9CR29 Snord50a-201ENSMUST00000178154 72 ntBASIC-3.46□□□□□ -2.96
Ccdc43Q9CR29 Gm24463-201ENSMUST00000178417 72 ntBASIC-3.46□□□□□ -2.96
Ccdc43Q9CR29 Mir297a-3-201ENSMUST00000103768 102 ntBASIC-3.48□□□□□ -2.97
Ccdc43Q9CR29 Gm25779-201ENSMUST00000116710 95 ntBASIC-3.48□□□□□ -2.97
Ccdc43Q9CR29 Gm26472-201ENSMUST00000116760 83 ntBASIC-3.48□□□□□ -2.97
Ccdc43Q9CR29 Gm26122-201ENSMUST00000083362 82 ntBASIC-3.48□□□□□ -2.97
Ccdc43Q9CR29 Gm26485-201ENSMUST00000158019 64 ntBASIC-3.5□□□□□ -2.97
Ccdc43Q9CR29 Gm23038-201ENSMUST00000083873 104 ntBASIC-3.5□□□□□ -2.97
Ccdc43Q9CR29 Gm22313-201ENSMUST00000158008 129 ntBASIC-3.51□□□□□ -2.97
Ccdc43Q9CR29 AC157278.1-201ENSMUST00000221621 148 ntBASIC-3.56□□□□□ -2.98
Ccdc43Q9CR29 Gm27450-201ENSMUST00000104632 90 ntBASIC-3.57□□□□□ -2.98
Ccdc43Q9CR29 Gm11966-201ENSMUST00000119907 87 ntBASIC-3.58□□□□□ -2.98
Ccdc43Q9CR29 Gm25847-201ENSMUST00000116793 96 ntBASIC-3.6□□□□□ -2.99
Ccdc43Q9CR29 Gm24482-201ENSMUST00000117005 93 ntBASIC-3.61□□□□□ -2.99
Ccdc43Q9CR29 Gm24646-201ENSMUST00000157109 99 ntBASIC-3.61□□□□□ -2.99
Ccdc43Q9CR29 Gm22183-201ENSMUST00000175420 73 ntBASIC-3.61□□□□□ -2.99
Ccdc43Q9CR29 Gm22950-201ENSMUST00000082776 107 ntBASIC-3.61□□□□□ -2.99
Ccdc43Q9CR29 Mir470-201ENSMUST00000093565 75 ntBASIC-3.61□□□□□ -2.99
Ccdc43Q9CR29 Mir466o-201ENSMUST00000104832 84 ntBASIC-3.62□□□□□ -2.99
Ccdc43Q9CR29 Gm25143-201ENSMUST00000082696 109 ntBASIC-3.62□□□□□ -2.99
Ccdc43Q9CR29 Gm23637-201ENSMUST00000175075 94 ntBASIC-3.64□□□□□ -2.99
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms