Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm24378-201ENSMUST00000122699 106 ntBASIC-1.04□□□□□ -2.58
Ctr9Q62018 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-1.04□□□□□ -2.58
Ctr9Q62018 Mir7055-201ENSMUST00000197423 59 ntBASIC-1.04□□□□□ -2.58
Ctr9Q62018 Gm43943-201ENSMUST00000204201 113 ntBASIC-1.04□□□□□ -2.58
Ctr9Q62018 Gm26375-201ENSMUST00000101829 106 ntBASIC-1.05□□□□□ -2.58
Ctr9Q62018 Gm25382-201ENSMUST00000157811 97 ntBASIC-1.06□□□□□ -2.58
Ctr9Q62018 Gm23817-201ENSMUST00000158449 104 ntBASIC-1.07□□□□□ -2.58
Ctr9Q62018 Gm22013-201ENSMUST00000158788 103 ntBASIC-1.07□□□□□ -2.58
Ctr9Q62018 Gm25648-201ENSMUST00000177844 79 ntBASIC-1.07□□□□□ -2.58
Ctr9Q62018 AC154832.1-201ENSMUST00000228928 141 ntBASIC-1.07□□□□□ -2.58
Ctr9Q62018 Gm24051-201ENSMUST00000158622 75 ntBASIC-1.08□□□□□ -2.58
Ctr9Q62018 AC238676.2-201ENSMUST00000220910 94 ntBASIC-1.08□□□□□ -2.58
Ctr9Q62018 Gm22746-201ENSMUST00000082494 107 ntBASIC-1.08□□□□□ -2.58
Ctr9Q62018 Gm23293-201ENSMUST00000082552 104 ntBASIC-1.08□□□□□ -2.58
Ctr9Q62018 Gm25429-201ENSMUST00000157607 132 ntBASIC-1.09□□□□□ -2.58
Ctr9Q62018 Snord123-201ENSMUST00000158692 71 ntBASIC-1.09□□□□□ -2.58
Ctr9Q62018 Gm22357-201ENSMUST00000082882 83 ntBASIC-1.09□□□□□ -2.58
Ctr9Q62018 Gm24203-201ENSMUST00000082949 114 ntBASIC-1.09□□□□□ -2.58
Ctr9Q62018 Gm26051-201ENSMUST00000104642 93 ntBASIC-1.1□□□□□ -2.59
Ctr9Q62018 Gm26485-201ENSMUST00000158019 64 ntBASIC-1.1□□□□□ -2.59
Ctr9Q62018 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.1□□□□□ -2.59
Ctr9Q62018 Gm23649-201ENSMUST00000179007 107 ntBASIC-1.11□□□□□ -2.59
Ctr9Q62018 CT030166.3-201ENSMUST00000223203 193 ntBASIC-1.11□□□□□ -2.59
Ctr9Q62018 Gm23730-201ENSMUST00000083236 107 ntBASIC-1.12□□□□□ -2.59
Ctr9Q62018 Gm25652-201ENSMUST00000083780 103 ntBASIC-1.13□□□□□ -2.59
Ctr9Q62018 Gm25183-201ENSMUST00000157752 106 ntBASIC-1.14□□□□□ -2.59
Ctr9Q62018 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-1.14□□□□□ -2.59
Ctr9Q62018 Gm11966-201ENSMUST00000119907 87 ntBASIC-1.15□□□□□ -2.59
Ctr9Q62018 Gm25248-201ENSMUST00000175473 98 ntBASIC-1.15□□□□□ -2.59
Ctr9Q62018 Mir543-201ENSMUST00000102286 76 ntBASIC-1.16□□□□□ -2.6
Ctr9Q62018 Gm23785-201ENSMUST00000116741 96 ntBASIC-1.16□□□□□ -2.6
Ctr9Q62018 Gm37646-201ENSMUST00000191756 111 ntBASIC-1.16□□□□□ -2.6
Ctr9Q62018 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.17□□□□□ -2.6
Ctr9Q62018 Gm22965-201ENSMUST00000157958 101 ntBASIC-1.17□□□□□ -2.6
Ctr9Q62018 Gm23812-201ENSMUST00000175156 84 ntBASIC-1.17□□□□□ -2.6
Ctr9Q62018 Gm23374-201ENSMUST00000175408 84 ntBASIC-1.17□□□□□ -2.6
Ctr9Q62018 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.17□□□□□ -2.6
Ctr9Q62018 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.18□□□□□ -2.6
Ctr9Q62018 Snord8-201ENSMUST00000175303 110 ntBASIC-1.18□□□□□ -2.6
Ctr9Q62018 Gm23613-201ENSMUST00000082596 87 ntBASIC-1.18□□□□□ -2.6
Ctr9Q62018 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.19□□□□□ -2.6
Ctr9Q62018 Gm25552-201ENSMUST00000158081 91 ntBASIC-1.19□□□□□ -2.6
Ctr9Q62018 Gm24723-201ENSMUST00000158233 132 ntBASIC-1.19□□□□□ -2.6
Ctr9Q62018 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC-1.2□□□□□ -2.6
Ctr9Q62018 AC157278.1-201ENSMUST00000221621 148 ntBASIC-1.2□□□□□ -2.6
Ctr9Q62018 Gm24927-201ENSMUST00000083397 107 ntBASIC-1.2□□□□□ -2.6
Ctr9Q62018 Gm24259-201ENSMUST00000083740 107 ntBASIC-1.2□□□□□ -2.6
Ctr9Q62018 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC-1.2□□□□□ -2.6
Ctr9Q62018 Gm25995-201ENSMUST00000175396 142 ntBASIC-1.21□□□□□ -2.6
Ctr9Q62018 Gm24797-201ENSMUST00000178103 107 ntBASIC-1.21□□□□□ -2.6
Ctr9Q62018 Mir6339-201ENSMUST00000185120 117 ntBASIC-1.21□□□□□ -2.6
Ctr9Q62018 Gm24996-201ENSMUST00000158390 99 ntBASIC-1.22□□□□□ -2.6
Ctr9Q62018 Gm24226-201ENSMUST00000158826 97 ntBASIC-1.22□□□□□ -2.6
Ctr9Q62018 mt-Tl2-201ENSMUST00000082417 71 ntBASIC-1.22□□□□□ -2.6
Ctr9Q62018 Gm26043-201ENSMUST00000116912 91 ntBASIC-1.23□□□□□ -2.61
Ctr9Q62018 Gm24725-201ENSMUST00000158229 125 ntBASIC-1.23□□□□□ -2.61
Ctr9Q62018 Gm25903-201ENSMUST00000158492 103 ntBASIC-1.23□□□□□ -2.61
Ctr9Q62018 Gm27944-201ENSMUST00000185155 103 ntBASIC-1.23□□□□□ -2.61
Ctr9Q62018 Mir367-201ENSMUST00000083479 75 ntBASIC-1.23□□□□□ -2.61
Ctr9Q62018 Mir6964-201ENSMUST00000200252 59 ntBASIC-1.24□□□□□ -2.61
Ctr9Q62018 AC122210.2-201ENSMUST00000220216 115 ntBASIC-1.24□□□□□ -2.61
Ctr9Q62018 Gm27450-201ENSMUST00000104632 90 ntBASIC-1.25□□□□□ -2.61
Ctr9Q62018 Gm24091-201ENSMUST00000082550 83 ntBASIC-1.26□□□□□ -2.61
Ctr9Q62018 Gm23711-201ENSMUST00000083856 83 ntBASIC-1.26□□□□□ -2.61
Ctr9Q62018 n-R5s153-201ENSMUST00000083451 116 ntBASIC-1.27□□□□□ -2.61
Ctr9Q62018 Mir466l-201ENSMUST00000104866 121 ntBASIC-1.29□□□□□ -2.62
Ctr9Q62018 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.29□□□□□ -2.62
Ctr9Q62018 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.29□□□□□ -2.62
Ctr9Q62018 Gm25023-201ENSMUST00000082977 107 ntBASIC-1.29□□□□□ -2.62
Ctr9Q62018 Gm26139-201ENSMUST00000180098 107 ntBASIC-1.3□□□□□ -2.62
Ctr9Q62018 Gm24673-201ENSMUST00000116948 124 ntBASIC-1.31□□□□□ -2.62
Ctr9Q62018 Gm24197-201ENSMUST00000175085 109 ntBASIC-1.31□□□□□ -2.62
Ctr9Q62018 Gm23108-201ENSMUST00000178295 124 ntBASIC-1.31□□□□□ -2.62
Ctr9Q62018 Gm23992-201ENSMUST00000174981 67 ntBASIC-1.32□□□□□ -2.62
Ctr9Q62018 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-1.32□□□□□ -2.62
Ctr9Q62018 Gm25779-201ENSMUST00000116710 95 ntBASIC-1.33□□□□□ -2.62
Ctr9Q62018 Gm44347-201ENSMUST00000199602 108 ntBASIC-1.33□□□□□ -2.62
Ctr9Q62018 Gm26052-201ENSMUST00000104646 84 ntBASIC-1.34□□□□□ -2.62
Ctr9Q62018 Gm22039-201ENSMUST00000157278 132 ntBASIC-1.34□□□□□ -2.62
Ctr9Q62018 Gm22602-201ENSMUST00000157596 95 ntBASIC-1.34□□□□□ -2.62
Ctr9Q62018 Gm24297-201ENSMUST00000158300 68 ntBASIC-1.36□□□□□ -2.63
Ctr9Q62018 Gm25847-201ENSMUST00000116793 96 ntBASIC-1.37□□□□□ -2.63
Ctr9Q62018 Gm23787-201ENSMUST00000122538 73 ntBASIC-1.37□□□□□ -2.63
Ctr9Q62018 Gm23811-201ENSMUST00000175155 84 ntBASIC-1.37□□□□□ -2.63
Ctr9Q62018 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.38□□□□□ -2.63
Ctr9Q62018 Mir466q-201ENSMUST00000175249 76 ntBASIC-1.38□□□□□ -2.63
Ctr9Q62018 Mir34c-201ENSMUST00000083653 77 ntBASIC-1.38□□□□□ -2.63
Ctr9Q62018 Mir295-201ENSMUST00000104694 69 ntBASIC-1.39□□□□□ -2.63
Ctr9Q62018 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.39□□□□□ -2.63
Ctr9Q62018 Gm24459-201ENSMUST00000082730 86 ntBASIC-1.39□□□□□ -2.63
Ctr9Q62018 Mir192-201ENSMUST00000083589 89 ntBASIC-1.4□□□□□ -2.63
Ctr9Q62018 Mir28c-201ENSMUST00000200096 75 ntBASIC-1.41□□□□□ -2.64
Ctr9Q62018 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.42□□□□□ -2.64
Ctr9Q62018 Gm22464-201ENSMUST00000175273 64 ntBASIC-1.42□□□□□ -2.64
Ctr9Q62018 Gm24097-201ENSMUST00000178720 107 ntBASIC-1.42□□□□□ -2.64
Ctr9Q62018 Gm25465-201ENSMUST00000157716 105 ntBASIC-1.43□□□□□ -2.64
Ctr9Q62018 Mir539-201ENSMUST00000102109 74 ntBASIC-1.45□□□□□ -2.64
Ctr9Q62018 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.45□□□□□ -2.64
Ctr9Q62018 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.46□□□□□ -2.64
Ctr9Q62018 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.47□□□□□ -2.64
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms