Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.15□□□□□ -2.43
Col28a1Q2UY11 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.16□□□□□ -2.44
Col28a1Q2UY11 Gm24587-201ENSMUST00000116697 89 ntBASIC-0.16□□□□□ -2.44
Col28a1Q2UY11 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.16□□□□□ -2.44
Col28a1Q2UY11 Gm25772-201ENSMUST00000158574 56 ntBASIC-0.16□□□□□ -2.44
Col28a1Q2UY11 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-0.16□□□□□ -2.44
Col28a1Q2UY11 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.17□□□□□ -2.44
Col28a1Q2UY11 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.18□□□□□ -2.44
Col28a1Q2UY11 Gm24459-201ENSMUST00000082730 86 ntBASIC-0.18□□□□□ -2.44
Col28a1Q2UY11 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.2□□□□□ -2.44
Col28a1Q2UY11 Mir295-201ENSMUST00000104694 69 ntBASIC-0.2□□□□□ -2.44
Col28a1Q2UY11 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.2□□□□□ -2.44
Col28a1Q2UY11 Mir297b-201ENSMUST00000102268 109 ntBASIC-0.21□□□□□ -2.44
Col28a1Q2UY11 Gm24651-201ENSMUST00000157107 107 ntBASIC-0.21□□□□□ -2.44
Col28a1Q2UY11 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.21□□□□□ -2.44
Col28a1Q2UY11 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.21□□□□□ -2.44
Col28a1Q2UY11 Mir125b-1-201ENSMUST00000175613 77 ntBASIC-0.22□□□□□ -2.44
Col28a1Q2UY11 Gm22260-201ENSMUST00000178643 107 ntBASIC-0.22□□□□□ -2.44
Col28a1Q2UY11 Mir96-201ENSMUST00000083652 106 ntBASIC-0.22□□□□□ -2.44
Col28a1Q2UY11 Gm26306-201ENSMUST00000157773 119 ntBASIC-0.23□□□□□ -2.45
Col28a1Q2UY11 Mir1839-201ENSMUST00000175366 127 ntBASIC-0.23□□□□□ -2.45
Col28a1Q2UY11 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.23□□□□□ -2.45
Col28a1Q2UY11 Mir183-201ENSMUST00000083685 70 ntBASIC-0.23□□□□□ -2.45
Col28a1Q2UY11 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.24□□□□□ -2.45
Col28a1Q2UY11 Gm44589-201ENSMUST00000207025 115 ntBASIC-0.24□□□□□ -2.45
Col28a1Q2UY11 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.24□□□□□ -2.45
Col28a1Q2UY11 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC-0.24□□□□□ -2.45
Col28a1Q2UY11 Gm25431-201ENSMUST00000101978 107 ntBASIC-0.25□□□□□ -2.45
Col28a1Q2UY11 Gm22056-201ENSMUST00000083386 81 ntBASIC-0.25□□□□□ -2.45
Col28a1Q2UY11 Gm25388-201ENSMUST00000157339 151 ntBASIC-0.26□□□□□ -2.45
Col28a1Q2UY11 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.26□□□□□ -2.45
Col28a1Q2UY11 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.26□□□□□ -2.45
Col28a1Q2UY11 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.26□□□□□ -2.45
Col28a1Q2UY11 Gm25023-201ENSMUST00000082977 107 ntBASIC-0.26□□□□□ -2.45
Col28a1Q2UY11 Mir7094-2-201ENSMUST00000184622 60 ntBASIC-0.27□□□□□ -2.45
Col28a1Q2UY11 Mir7094-1-201ENSMUST00000199671 60 ntBASIC-0.27□□□□□ -2.45
Col28a1Q2UY11 Gm22301-201ENSMUST00000082656 107 ntBASIC-0.27□□□□□ -2.45
Col28a1Q2UY11 n-R5s8-201ENSMUST00000104121 118 ntBASIC-0.28□□□□□ -2.45
Col28a1Q2UY11 Gm22197-201ENSMUST00000116866 58 ntBASIC-0.28□□□□□ -2.45
Col28a1Q2UY11 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.28□□□□□ -2.45
Col28a1Q2UY11 Gm25225-201ENSMUST00000158197 102 ntBASIC-0.29□□□□□ -2.46
Col28a1Q2UY11 Mir466q-201ENSMUST00000175249 76 ntBASIC-0.29□□□□□ -2.46
Col28a1Q2UY11 Gm25995-201ENSMUST00000175396 142 ntBASIC-0.29□□□□□ -2.46
Col28a1Q2UY11 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.29□□□□□ -2.46
Col28a1Q2UY11 Gm24372-201ENSMUST00000104400 110 ntBASIC-0.3□□□□□ -2.46
Col28a1Q2UY11 Gm24531-201ENSMUST00000157945 100 ntBASIC-0.3□□□□□ -2.46
Col28a1Q2UY11 Mir7043-201ENSMUST00000184219 70 ntBASIC-0.3□□□□□ -2.46
Col28a1Q2UY11 Gm27735-201ENSMUST00000185085 76 ntBASIC-0.3□□□□□ -2.46
Col28a1Q2UY11 Mir6957-201ENSMUST00000183708 64 ntBASIC-0.31□□□□□ -2.46
Col28a1Q2UY11 Gm44347-201ENSMUST00000199602 108 ntBASIC-0.31□□□□□ -2.46
Col28a1Q2UY11 Gm19248-201ENSMUST00000209404 110 ntBASIC-0.31□□□□□ -2.46
Col28a1Q2UY11 Gm22489-201ENSMUST00000116813 62 ntBASIC-0.32□□□□□ -2.46
Col28a1Q2UY11 Gm27610-201ENSMUST00000184026 74 ntBASIC-0.32□□□□□ -2.46
Col28a1Q2UY11 Mir378c-201ENSMUST00000184478 99 ntBASIC-0.32□□□□□ -2.46
Col28a1Q2UY11 Snord16a-201ENSMUST00000083895 99 ntBASIC-0.32□□□□□ -2.46
Col28a1Q2UY11 Mir145b-201ENSMUST00000184434 75 ntBASIC-0.33□□□□□ -2.46
Col28a1Q2UY11 Gm25712-201ENSMUST00000158634 93 ntBASIC-0.34□□□□□ -2.46
Col28a1Q2UY11 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.34□□□□□ -2.46
Col28a1Q2UY11 Mir677-202ENSMUST00000197076 78 ntBASIC-0.34□□□□□ -2.46
Col28a1Q2UY11 Gm23904-201ENSMUST00000157567 124 ntBASIC-0.35□□□□□ -2.47
Col28a1Q2UY11 Gm24097-201ENSMUST00000178720 107 ntBASIC-0.35□□□□□ -2.47
Col28a1Q2UY11 Gm22813-202ENSMUST00000200346 124 ntBASIC-0.35□□□□□ -2.47
Col28a1Q2UY11 Mir466f-1-201ENSMUST00000104779 94 ntBASIC-0.36□□□□□ -2.47
Col28a1Q2UY11 Mir669m-1-201ENSMUST00000158945 98 ntBASIC-0.36□□□□□ -2.47
Col28a1Q2UY11 Gm22234-201ENSMUST00000174906 65 ntBASIC-0.36□□□□□ -2.47
Col28a1Q2UY11 Gm22550-201ENSMUST00000179774 107 ntBASIC-0.36□□□□□ -2.47
Col28a1Q2UY11 Gm22060-201ENSMUST00000082558 107 ntBASIC-0.36□□□□□ -2.47
Col28a1Q2UY11 Mir367-201ENSMUST00000083479 75 ntBASIC-0.36□□□□□ -2.47
Col28a1Q2UY11 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-0.36□□□□□ -2.47
Col28a1Q2UY11 Mir574-201ENSMUST00000103854 78 ntBASIC-0.37□□□□□ -2.47
Col28a1Q2UY11 Gm25132-201ENSMUST00000082652 107 ntBASIC-0.37□□□□□ -2.47
Col28a1Q2UY11 Mir3101-201ENSMUST00000175607 88 ntBASIC-0.38□□□□□ -2.47
Col28a1Q2UY11 Gm26262-201ENSMUST00000158024 127 ntBASIC-0.39□□□□□ -2.47
Col28a1Q2UY11 Gm24003-201ENSMUST00000158455 100 ntBASIC-0.39□□□□□ -2.47
Col28a1Q2UY11 Gm23831-201ENSMUST00000158895 85 ntBASIC-0.39□□□□□ -2.47
Col28a1Q2UY11 Gm26227-201ENSMUST00000082510 101 ntBASIC-0.39□□□□□ -2.47
Col28a1Q2UY11 Mir1969-201ENSMUST00000157623 94 ntBASIC-0.4□□□□□ -2.47
Col28a1Q2UY11 Gm24714-201ENSMUST00000102382 101 ntBASIC-0.41□□□□□ -2.48
Col28a1Q2UY11 Gm22602-201ENSMUST00000157596 95 ntBASIC-0.41□□□□□ -2.48
Col28a1Q2UY11 Gm23811-201ENSMUST00000175155 84 ntBASIC-0.41□□□□□ -2.48
Col28a1Q2UY11 Gm23812-201ENSMUST00000175156 84 ntBASIC-0.41□□□□□ -2.48
Col28a1Q2UY11 Gm23374-201ENSMUST00000175408 84 ntBASIC-0.41□□□□□ -2.48
Col28a1Q2UY11 Gm44311-201ENSMUST00000196448 69 ntBASIC-0.42□□□□□ -2.48
Col28a1Q2UY11 Gm24673-201ENSMUST00000116948 124 ntBASIC-0.43□□□□□ -2.48
Col28a1Q2UY11 Gm22013-201ENSMUST00000158788 103 ntBASIC-0.43□□□□□ -2.48
Col28a1Q2UY11 Gm25248-201ENSMUST00000175473 98 ntBASIC-0.43□□□□□ -2.48
Col28a1Q2UY11 Gm23108-201ENSMUST00000178295 124 ntBASIC-0.43□□□□□ -2.48
Col28a1Q2UY11 Mir5124b-201ENSMUST00000184251 85 ntBASIC-0.43□□□□□ -2.48
Col28a1Q2UY11 Gm24296-201ENSMUST00000158297 106 ntBASIC-0.44□□□□□ -2.48
Col28a1Q2UY11 Gm23308-201ENSMUST00000179475 107 ntBASIC-0.44□□□□□ -2.48
Col28a1Q2UY11 Mir7057-201ENSMUST00000184685 58 ntBASIC-0.44□□□□□ -2.48
Col28a1Q2UY11 AC122210.2-201ENSMUST00000220216 115 ntBASIC-0.44□□□□□ -2.48
Col28a1Q2UY11 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-0.44□□□□□ -2.48
Col28a1Q2UY11 Gm22938-201ENSMUST00000103956 120 ntBASIC-0.45□□□□□ -2.48
Col28a1Q2UY11 Snord8-201ENSMUST00000175303 110 ntBASIC-0.45□□□□□ -2.48
Col28a1Q2UY11 Gm24704-201ENSMUST00000093715 107 ntBASIC-0.45□□□□□ -2.48
Col28a1Q2UY11 Mir28c-201ENSMUST00000200096 75 ntBASIC-0.46□□□□□ -2.48
Col28a1Q2UY11 Gm27944-201ENSMUST00000185155 103 ntBASIC-0.47□□□□□ -2.48
Col28a1Q2UY11 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-0.47□□□□□ -2.48
Col28a1Q2UY11 Gm26131-201ENSMUST00000082725 110 ntBASIC-0.47□□□□□ -2.48
Retrieved 100 of 76,532 protein–RNA pairs in 166.9 ms