Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm23856-201ENSMUST00000158380 99 ntBASIC-2.44□□□□□ -2.8
Sdc1P18828 Gm26051-201ENSMUST00000104642 93 ntBASIC-2.45□□□□□ -2.8
Sdc1P18828 Gm22965-201ENSMUST00000157958 101 ntBASIC-2.46□□□□□ -2.8
Sdc1P18828 Gm22313-201ENSMUST00000158008 129 ntBASIC-2.46□□□□□ -2.8
Sdc1P18828 mt-Tf-201ENSMUST00000082387 68 ntBASIC-2.46□□□□□ -2.8
Sdc1P18828 Gm22004-201ENSMUST00000101884 107 ntBASIC-2.47□□□□□ -2.8
Sdc1P18828 Gm23992-201ENSMUST00000174981 67 ntBASIC-2.47□□□□□ -2.8
Sdc1P18828 Mir466q-201ENSMUST00000175249 76 ntBASIC-2.47□□□□□ -2.8
Sdc1P18828 Gm23730-201ENSMUST00000083236 107 ntBASIC-2.47□□□□□ -2.8
Sdc1P18828 Gm24646-201ENSMUST00000157109 99 ntBASIC-2.48□□□□□ -2.81
Sdc1P18828 AC238676.2-201ENSMUST00000220910 94 ntBASIC-2.48□□□□□ -2.81
Sdc1P18828 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC-2.49□□□□□ -2.81
Sdc1P18828 Gm43206-201ENSMUST00000197990 114 ntBASIC-2.49□□□□□ -2.81
Sdc1P18828 Gm44353-201ENSMUST00000200618 138 ntBASIC-2.49□□□□□ -2.81
Sdc1P18828 Gm24590-201ENSMUST00000116699 119 ntBASIC-2.5□□□□□ -2.81
Sdc1P18828 Gm22354-201ENSMUST00000083919 70 ntBASIC-2.5□□□□□ -2.81
Sdc1P18828 Mir295-201ENSMUST00000104694 69 ntBASIC-2.51□□□□□ -2.81
Sdc1P18828 Gm24683-201ENSMUST00000104840 88 ntBASIC-2.51□□□□□ -2.81
Sdc1P18828 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC-2.52□□□□□ -2.81
Sdc1P18828 Mir466o-201ENSMUST00000104832 84 ntBASIC-2.53□□□□□ -2.81
Sdc1P18828 Gm22183-201ENSMUST00000175420 73 ntBASIC-2.53□□□□□ -2.81
Sdc1P18828 Mir7116-201ENSMUST00000195956 70 ntBASIC-2.53□□□□□ -2.81
Sdc1P18828 Mir470-201ENSMUST00000093565 75 ntBASIC-2.53□□□□□ -2.81
Sdc1P18828 Gm26472-201ENSMUST00000116760 83 ntBASIC-2.54□□□□□ -2.82
Sdc1P18828 Gm26257-201ENSMUST00000122500 107 ntBASIC-2.55□□□□□ -2.82
Sdc1P18828 Gm24674-201ENSMUST00000179194 104 ntBASIC-2.56□□□□□ -2.82
Sdc1P18828 Gm24723-201ENSMUST00000158233 132 ntBASIC-2.57□□□□□ -2.82
Sdc1P18828 Gm25648-201ENSMUST00000177844 79 ntBASIC-2.57□□□□□ -2.82
Sdc1P18828 Gm24705-201ENSMUST00000082808 107 ntBASIC-2.57□□□□□ -2.82
Sdc1P18828 Gm24259-201ENSMUST00000083740 107 ntBASIC-2.57□□□□□ -2.82
Sdc1P18828 Gm24331-201ENSMUST00000175099 67 ntBASIC-2.58□□□□□ -2.82
Sdc1P18828 Gm23801-201ENSMUST00000175561 67 ntBASIC-2.58□□□□□ -2.82
Sdc1P18828 Gm24485-201ENSMUST00000178283 67 ntBASIC-2.58□□□□□ -2.82
Sdc1P18828 Gm23244-201ENSMUST00000083375 92 ntBASIC-2.58□□□□□ -2.82
Sdc1P18828 Gm23566-201ENSMUST00000174907 108 ntBASIC-2.59□□□□□ -2.82
Sdc1P18828 Gm27987-201ENSMUST00000184023 93 ntBASIC-2.59□□□□□ -2.82
Sdc1P18828 AC160962.3-201ENSMUST00000225914 112 ntBASIC-2.59□□□□□ -2.82
Sdc1P18828 Gm25812-201ENSMUST00000082751 103 ntBASIC-2.59□□□□□ -2.82
Sdc1P18828 Gm22573-201ENSMUST00000082982 102 ntBASIC-2.59□□□□□ -2.82
Sdc1P18828 Gm24492-201ENSMUST00000083798 107 ntBASIC-2.59□□□□□ -2.82
Sdc1P18828 Gm44932-201ENSMUST00000206799 121 ntBASIC-2.6□□□□□ -2.83
Sdc1P18828 Mir467e-201ENSMUST00000103760 87 ntBASIC-2.61□□□□□ -2.83
Sdc1P18828 Gm25779-201ENSMUST00000116710 95 ntBASIC-2.61□□□□□ -2.83
Sdc1P18828 Gm22286-201ENSMUST00000179708 107 ntBASIC-2.61□□□□□ -2.83
Sdc1P18828 Gm20305-201ENSMUST00000193226 177 ntBASIC-2.61□□□□□ -2.83
Sdc1P18828 Gm24676-201ENSMUST00000158758 75 ntBASIC-2.62□□□□□ -2.83
Sdc1P18828 Gm22232-201ENSMUST00000104654 94 ntBASIC-2.63□□□□□ -2.83
Sdc1P18828 Gm23376-201ENSMUST00000082938 160 ntBASIC-2.63□□□□□ -2.83
Sdc1P18828 Gm22729-201ENSMUST00000158088 129 ntBASIC-2.64□□□□□ -2.83
Sdc1P18828 Gm24185-201ENSMUST00000122578 105 ntBASIC-2.65□□□□□ -2.83
Sdc1P18828 Mir485-201ENSMUST00000093620 73 ntBASIC-2.65□□□□□ -2.83
Sdc1P18828 Gm23707-201ENSMUST00000104366 125 ntBASIC-2.66□□□□□ -2.84
Sdc1P18828 Gm25112-201ENSMUST00000122680 104 ntBASIC-2.66□□□□□ -2.84
Sdc1P18828 Mir335-201ENSMUST00000083567 98 ntBASIC-2.66□□□□□ -2.84
Sdc1P18828 Gm24297-201ENSMUST00000158300 68 ntBASIC-2.67□□□□□ -2.84
Sdc1P18828 Gm24996-201ENSMUST00000158390 99 ntBASIC-2.67□□□□□ -2.84
Sdc1P18828 Gm25143-201ENSMUST00000082696 109 ntBASIC-2.67□□□□□ -2.84
Sdc1P18828 Gm23543-201ENSMUST00000158207 106 ntBASIC-2.68□□□□□ -2.84
Sdc1P18828 Gm23787-201ENSMUST00000122538 73 ntBASIC-2.7□□□□□ -2.84
Sdc1P18828 Gm24378-201ENSMUST00000122699 106 ntBASIC-2.7□□□□□ -2.84
Sdc1P18828 Gm24495-201ENSMUST00000178575 79 ntBASIC-2.7□□□□□ -2.84
Sdc1P18828 Gm22253-201ENSMUST00000179870 79 ntBASIC-2.7□□□□□ -2.84
Sdc1P18828 CT571266.1-201ENSMUST00000222859 153 ntBASIC-2.7□□□□□ -2.84
Sdc1P18828 Gm24797-201ENSMUST00000178103 107 ntBASIC-2.71□□□□□ -2.84
Sdc1P18828 Mir7670-201ENSMUST00000183689 69 ntBASIC-2.72□□□□□ -2.84
Sdc1P18828 Gm23578-201ENSMUST00000103943 104 ntBASIC-2.73□□□□□ -2.85
Sdc1P18828 Gm24502-201ENSMUST00000158453 105 ntBASIC-2.73□□□□□ -2.85
Sdc1P18828 Gm22402-201ENSMUST00000174920 110 ntBASIC-2.73□□□□□ -2.85
Sdc1P18828 Gm22213-201ENSMUST00000157564 119 ntBASIC-2.74□□□□□ -2.85
Sdc1P18828 Gm26052-201ENSMUST00000104646 84 ntBASIC-2.75□□□□□ -2.85
Sdc1P18828 Gm24016-201ENSMUST00000157726 68 ntBASIC-2.75□□□□□ -2.85
Sdc1P18828 Gm23966-201ENSMUST00000179823 107 ntBASIC-2.75□□□□□ -2.85
Sdc1P18828 Gm23350-201ENSMUST00000158429 103 ntBASIC-2.76□□□□□ -2.85
Sdc1P18828 Gm22095-201ENSMUST00000158984 150 ntBASIC-2.76□□□□□ -2.85
Sdc1P18828 Gm24234-201ENSMUST00000104316 107 ntBASIC-2.77□□□□□ -2.85
Sdc1P18828 Gm25905-201ENSMUST00000158490 101 ntBASIC-2.77□□□□□ -2.85
Sdc1P18828 Gm23644-201ENSMUST00000157856 77 ntBASIC-2.78□□□□□ -2.85
Sdc1P18828 Gm25380-201ENSMUST00000175463 107 ntBASIC-2.78□□□□□ -2.85
Sdc1P18828 Gm24641-201ENSMUST00000178055 107 ntBASIC-2.78□□□□□ -2.85
Sdc1P18828 Gm25484-201ENSMUST00000178217 107 ntBASIC-2.78□□□□□ -2.85
Sdc1P18828 Gm26138-201ENSMUST00000179236 107 ntBASIC-2.78□□□□□ -2.85
Sdc1P18828 Gm22821-201ENSMUST00000179288 107 ntBASIC-2.78□□□□□ -2.85
Sdc1P18828 Gm23298-201ENSMUST00000083181 107 ntBASIC-2.78□□□□□ -2.85
Sdc1P18828 Gm22057-201ENSMUST00000083387 107 ntBASIC-2.78□□□□□ -2.85
Sdc1P18828 Gm25516-201ENSMUST00000083857 107 ntBASIC-2.78□□□□□ -2.85
Sdc1P18828 Gm23315-201ENSMUST00000158003 109 ntBASIC-2.79□□□□□ -2.86
Sdc1P18828 Gm25183-201ENSMUST00000157752 106 ntBASIC-2.8□□□□□ -2.86
Sdc1P18828 Gm25847-201ENSMUST00000116793 96 ntBASIC-2.81□□□□□ -2.86
Sdc1P18828 Gm23428-201ENSMUST00000122488 102 ntBASIC-2.81□□□□□ -2.86
Sdc1P18828 Gm24167-201ENSMUST00000177733 124 ntBASIC-2.81□□□□□ -2.86
Sdc1P18828 Gm24028-201ENSMUST00000178991 124 ntBASIC-2.81□□□□□ -2.86
Sdc1P18828 Gm23649-201ENSMUST00000179007 107 ntBASIC-2.81□□□□□ -2.86
Sdc1P18828 Gm23556-201ENSMUST00000157821 92 ntBASIC-2.82□□□□□ -2.86
Sdc1P18828 Gm24538-201ENSMUST00000082612 107 ntBASIC-2.82□□□□□ -2.86
Sdc1P18828 Mir1950-201ENSMUST00000158526 74 ntBASIC-2.86□□□□□ -2.87
Sdc1P18828 Gm24631-201ENSMUST00000122765 81 ntBASIC-2.87□□□□□ -2.87
Sdc1P18828 Gm44481-201ENSMUST00000197288 84 ntBASIC-2.87□□□□□ -2.87
Sdc1P18828 AL929417.1-201ENSMUST00000214901 124 ntBASIC-2.87□□□□□ -2.87
Sdc1P18828 Gm27450-201ENSMUST00000104632 90 ntBASIC-2.88□□□□□ -2.87
Sdc1P18828 Gm22296-201ENSMUST00000083310 103 ntBASIC-2.88□□□□□ -2.87
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms