Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Mir7057-201ENSMUST00000184685 58 ntBASIC-0.71□□□□□ -2.52
Hdac3O88895 Gm22197-201ENSMUST00000116866 58 ntBASIC-0.72□□□□□ -2.52
Hdac3O88895 Gm25045-201ENSMUST00000122670 99 ntBASIC-0.72□□□□□ -2.52
Hdac3O88895 Gm22067-201ENSMUST00000122790 107 ntBASIC-0.72□□□□□ -2.52
Hdac3O88895 Gm25772-201ENSMUST00000158574 56 ntBASIC-0.72□□□□□ -2.52
Hdac3O88895 Gm24797-201ENSMUST00000178103 107 ntBASIC-0.72□□□□□ -2.52
Hdac3O88895 Gm26139-201ENSMUST00000180098 107 ntBASIC-0.72□□□□□ -2.52
Hdac3O88895 Gm24704-201ENSMUST00000093715 107 ntBASIC-0.72□□□□□ -2.52
Hdac3O88895 Gm22071-201ENSMUST00000116857 83 ntBASIC-0.73□□□□□ -2.53
Hdac3O88895 Gm23630-201ENSMUST00000175292 104 ntBASIC-0.73□□□□□ -2.53
Hdac3O88895 Gm24108-201ENSMUST00000175495 77 ntBASIC-0.73□□□□□ -2.53
Hdac3O88895 Mir3101-201ENSMUST00000175607 88 ntBASIC-0.73□□□□□ -2.53
Hdac3O88895 Mir6961-201ENSMUST00000183874 67 ntBASIC-0.73□□□□□ -2.53
Hdac3O88895 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-0.73□□□□□ -2.53
Hdac3O88895 Gm22039-201ENSMUST00000157278 132 ntBASIC-0.74□□□□□ -2.53
Hdac3O88895 Gm26262-201ENSMUST00000158024 127 ntBASIC-0.74□□□□□ -2.53
Hdac3O88895 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.74□□□□□ -2.53
Hdac3O88895 Mir669m-1-201ENSMUST00000158945 98 ntBASIC-0.75□□□□□ -2.53
Hdac3O88895 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-0.75□□□□□ -2.53
Hdac3O88895 Gm24003-201ENSMUST00000158455 100 ntBASIC-0.76□□□□□ -2.53
Hdac3O88895 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.77□□□□□ -2.53
Hdac3O88895 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-0.77□□□□□ -2.53
Hdac3O88895 Gm22938-201ENSMUST00000103956 120 ntBASIC-0.78□□□□□ -2.53
Hdac3O88895 Gm23237-201ENSMUST00000104639 92 ntBASIC-0.8□□□□□ -2.54
Hdac3O88895 Gm25354-201ENSMUST00000179110 105 ntBASIC-0.8□□□□□ -2.54
Hdac3O88895 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-0.8□□□□□ -2.54
Hdac3O88895 Gm26052-201ENSMUST00000104646 84 ntBASIC-0.81□□□□□ -2.54
Hdac3O88895 Gm23199-201ENSMUST00000158812 107 ntBASIC-0.81□□□□□ -2.54
Hdac3O88895 Gm27735-201ENSMUST00000185085 76 ntBASIC-0.81□□□□□ -2.54
Hdac3O88895 Gm37646-201ENSMUST00000191756 111 ntBASIC-0.81□□□□□ -2.54
Hdac3O88895 Mir297b-201ENSMUST00000102268 109 ntBASIC-0.84□□□□□ -2.54
Hdac3O88895 Gm22489-201ENSMUST00000116813 62 ntBASIC-0.84□□□□□ -2.54
Hdac3O88895 Gm23826-201ENSMUST00000157394 119 ntBASIC-0.84□□□□□ -2.54
Hdac3O88895 Gm25903-201ENSMUST00000158492 103 ntBASIC-0.84□□□□□ -2.54
Hdac3O88895 Gm22013-201ENSMUST00000158788 103 ntBASIC-0.84□□□□□ -2.54
Hdac3O88895 Gm23216-201ENSMUST00000179545 107 ntBASIC-0.84□□□□□ -2.54
Hdac3O88895 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC-0.84□□□□□ -2.54
Hdac3O88895 Gm25779-201ENSMUST00000116710 95 ntBASIC-0.85□□□□□ -2.55
Hdac3O88895 Gm25429-201ENSMUST00000157607 132 ntBASIC-0.85□□□□□ -2.55
Hdac3O88895 Gm24051-201ENSMUST00000158622 75 ntBASIC-0.85□□□□□ -2.55
Hdac3O88895 Gm43943-201ENSMUST00000204201 113 ntBASIC-0.85□□□□□ -2.55
Hdac3O88895 Gm22078-201ENSMUST00000157593 103 ntBASIC-0.86□□□□□ -2.55
Hdac3O88895 Gm25465-201ENSMUST00000157716 105 ntBASIC-0.86□□□□□ -2.55
Hdac3O88895 Snord123-201ENSMUST00000158692 71 ntBASIC-0.86□□□□□ -2.55
Hdac3O88895 Gm25995-201ENSMUST00000175396 142 ntBASIC-0.86□□□□□ -2.55
Hdac3O88895 Gm22069-201ENSMUST00000179911 107 ntBASIC-0.86□□□□□ -2.55
Hdac3O88895 Gm23787-201ENSMUST00000122538 73 ntBASIC-0.87□□□□□ -2.55
Hdac3O88895 Gm24297-201ENSMUST00000158300 68 ntBASIC-0.88□□□□□ -2.55
Hdac3O88895 Mir1969-201ENSMUST00000157623 94 ntBASIC-0.89□□□□□ -2.55
Hdac3O88895 Gm22943-201ENSMUST00000158564 76 ntBASIC-0.89□□□□□ -2.55
Hdac3O88895 Gm23974-201ENSMUST00000083321 131 ntBASIC-0.89□□□□□ -2.55
Hdac3O88895 Gm24381-201ENSMUST00000122697 104 ntBASIC-0.9□□□□□ -2.55
Hdac3O88895 Gm45688-201ENSMUST00000210002 101 ntBASIC-0.9□□□□□ -2.55
Hdac3O88895 Gm23992-201ENSMUST00000174981 67 ntBASIC-0.92□□□□□ -2.56
Hdac3O88895 Mir7055-201ENSMUST00000197423 59 ntBASIC-0.92□□□□□ -2.56
Hdac3O88895 Gm25493-201ENSMUST00000157375 103 ntBASIC-0.93□□□□□ -2.56
Hdac3O88895 Mir367-201ENSMUST00000083479 75 ntBASIC-0.93□□□□□ -2.56
Hdac3O88895 Gm24775-201ENSMUST00000157377 99 ntBASIC-0.94□□□□□ -2.56
Hdac3O88895 Gm22540-201ENSMUST00000158168 117 ntBASIC-0.94□□□□□ -2.56
Hdac3O88895 Gm44347-201ENSMUST00000199602 108 ntBASIC-0.94□□□□□ -2.56
Hdac3O88895 Gm25023-201ENSMUST00000082977 107 ntBASIC-0.94□□□□□ -2.56
Hdac3O88895 Gm26124-201ENSMUST00000083359 108 ntBASIC-0.94□□□□□ -2.56
Hdac3O88895 Mir669a-3-201ENSMUST00000102074 109 ntBASIC-0.95□□□□□ -2.56
Hdac3O88895 Gm24396-201ENSMUST00000116905 93 ntBASIC-0.95□□□□□ -2.56
Hdac3O88895 Gm24673-201ENSMUST00000116948 124 ntBASIC-0.96□□□□□ -2.56
Hdac3O88895 Gm23108-201ENSMUST00000178295 124 ntBASIC-0.96□□□□□ -2.56
Hdac3O88895 Mir6904-201ENSMUST00000183443 67 ntBASIC-0.96□□□□□ -2.56
Hdac3O88895 Gm27610-201ENSMUST00000184026 74 ntBASIC-0.96□□□□□ -2.56
Hdac3O88895 AC122210.2-201ENSMUST00000220216 115 ntBASIC-0.96□□□□□ -2.56
Hdac3O88895 Mir543-201ENSMUST00000102286 76 ntBASIC-0.97□□□□□ -2.56
Hdac3O88895 Gm22602-201ENSMUST00000157596 95 ntBASIC-0.98□□□□□ -2.57
Hdac3O88895 Gm24296-201ENSMUST00000158297 106 ntBASIC-0.98□□□□□ -2.57
Hdac3O88895 Mir295-201ENSMUST00000104694 69 ntBASIC-0.99□□□□□ -2.57
Hdac3O88895 Gm25222-201ENSMUST00000158199 126 ntBASIC-0.99□□□□□ -2.57
Hdac3O88895 Mir7043-201ENSMUST00000184219 70 ntBASIC-0.99□□□□□ -2.57
Hdac3O88895 Mir145b-201ENSMUST00000184434 75 ntBASIC-0.99□□□□□ -2.57
Hdac3O88895 Gm22234-201ENSMUST00000174906 65 ntBASIC-1□□□□□ -2.57
Hdac3O88895 Gm22401-201ENSMUST00000174927 117 ntBASIC-1□□□□□ -2.57
Hdac3O88895 Mir466q-201ENSMUST00000175249 76 ntBASIC-1.01□□□□□ -2.57
Hdac3O88895 Gm23811-201ENSMUST00000175155 84 ntBASIC-1.02□□□□□ -2.57
Hdac3O88895 Gm22474-201ENSMUST00000179407 107 ntBASIC-1.02□□□□□ -2.57
Hdac3O88895 Gm23613-201ENSMUST00000082596 87 ntBASIC-1.02□□□□□ -2.57
Hdac3O88895 Mir574-201ENSMUST00000103854 78 ntBASIC-1.04□□□□□ -2.58
Hdac3O88895 Gm24372-201ENSMUST00000104400 110 ntBASIC-1.04□□□□□ -2.58
Hdac3O88895 Gm25108-201ENSMUST00000122473 78 ntBASIC-1.04□□□□□ -2.58
Hdac3O88895 Mir28c-201ENSMUST00000200096 75 ntBASIC-1.04□□□□□ -2.58
Hdac3O88895 Gm24710-201ENSMUST00000175235 101 ntBASIC-1.05□□□□□ -2.58
Hdac3O88895 Gm24097-201ENSMUST00000178720 107 ntBASIC-1.05□□□□□ -2.58
Hdac3O88895 Gm24135-201ENSMUST00000179085 101 ntBASIC-1.05□□□□□ -2.58
Hdac3O88895 Gm22879-201ENSMUST00000082895 74 ntBASIC-1.05□□□□□ -2.58
Hdac3O88895 Gm25950-201ENSMUST00000175331 100 ntBASIC-1.06□□□□□ -2.58
Hdac3O88895 Mir6339-201ENSMUST00000185120 117 ntBASIC-1.06□□□□□ -2.58
Hdac3O88895 Gm26043-201ENSMUST00000116912 91 ntBASIC-1.07□□□□□ -2.58
Hdac3O88895 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.07□□□□□ -2.58
Hdac3O88895 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.07□□□□□ -2.58
Hdac3O88895 AC154832.1-201ENSMUST00000228928 141 ntBASIC-1.07□□□□□ -2.58
Hdac3O88895 Mir1955-201ENSMUST00000158014 98 ntBASIC-1.08□□□□□ -2.58
Hdac3O88895 Mir192-201ENSMUST00000083589 89 ntBASIC-1.08□□□□□ -2.58
Hdac3O88895 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-1.08□□□□□ -2.58
Hdac3O88895 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-1.1□□□□□ -2.59
Retrieved 100 of 76,532 protein–RNA pairs in 169.1 ms