Protein–RNA interactions for Protein: O88552

Cldn2, Claudin-2, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn2O88552 Mir6961-201ENSMUST00000183874 67 ntBASIC-1.1□□□□□ -2.59
Cldn2O88552 AC161271.1-201ENSMUST00000226914 150 ntBASIC-1.1□□□□□ -2.59
Cldn2O88552 Gm23649-201ENSMUST00000179007 107 ntBASIC-1.11□□□□□ -2.59
Cldn2O88552 Gm24704-201ENSMUST00000093715 107 ntBASIC-1.11□□□□□ -2.59
Cldn2O88552 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC-1.12□□□□□ -2.59
Cldn2O88552 Gm22938-201ENSMUST00000103956 120 ntBASIC-1.12□□□□□ -2.59
Cldn2O88552 Mir466l-201ENSMUST00000104866 121 ntBASIC-1.12□□□□□ -2.59
Cldn2O88552 Gm23630-201ENSMUST00000175292 104 ntBASIC-1.12□□□□□ -2.59
Cldn2O88552 Mir466m-201ENSMUST00000175052 84 ntBASIC-1.13□□□□□ -2.59
Cldn2O88552 Gm22746-201ENSMUST00000082494 107 ntBASIC-1.13□□□□□ -2.59
Cldn2O88552 Gm23730-201ENSMUST00000083236 107 ntBASIC-1.13□□□□□ -2.59
Cldn2O88552 Gm23785-201ENSMUST00000116741 96 ntBASIC-1.14□□□□□ -2.59
Cldn2O88552 Gm25183-201ENSMUST00000157752 106 ntBASIC-1.14□□□□□ -2.59
Cldn2O88552 Gm22965-201ENSMUST00000157958 101 ntBASIC-1.14□□□□□ -2.59
Cldn2O88552 Gm26262-201ENSMUST00000158024 127 ntBASIC-1.15□□□□□ -2.59
Cldn2O88552 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-1.16□□□□□ -2.6
Cldn2O88552 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-1.16□□□□□ -2.6
Cldn2O88552 Gm24003-201ENSMUST00000158455 100 ntBASIC-1.18□□□□□ -2.6
Cldn2O88552 Gm24091-201ENSMUST00000082550 83 ntBASIC-1.18□□□□□ -2.6
Cldn2O88552 Gm23711-201ENSMUST00000083856 83 ntBASIC-1.18□□□□□ -2.6
Cldn2O88552 mt-Tl2-201ENSMUST00000082417 71 ntBASIC-1.19□□□□□ -2.6
Cldn2O88552 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-1.2□□□□□ -2.6
Cldn2O88552 Gm24996-201ENSMUST00000158390 99 ntBASIC-1.21□□□□□ -2.6
Cldn2O88552 AC157278.1-201ENSMUST00000221621 148 ntBASIC-1.21□□□□□ -2.6
Cldn2O88552 Gm24927-201ENSMUST00000083397 107 ntBASIC-1.21□□□□□ -2.6
Cldn2O88552 Gm24259-201ENSMUST00000083740 107 ntBASIC-1.21□□□□□ -2.6
Cldn2O88552 Gm27450-201ENSMUST00000104632 90 ntBASIC-1.22□□□□□ -2.6
Cldn2O88552 Gm25552-201ENSMUST00000158081 91 ntBASIC-1.22□□□□□ -2.6
Cldn2O88552 Gm23199-201ENSMUST00000158812 107 ntBASIC-1.22□□□□□ -2.6
Cldn2O88552 Gm22357-201ENSMUST00000082882 83 ntBASIC-1.22□□□□□ -2.6
Cldn2O88552 Gm25652-201ENSMUST00000083780 103 ntBASIC-1.22□□□□□ -2.6
Cldn2O88552 Gm22013-201ENSMUST00000158788 103 ntBASIC-1.23□□□□□ -2.61
Cldn2O88552 Gm24226-201ENSMUST00000158826 97 ntBASIC-1.23□□□□□ -2.61
Cldn2O88552 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.24□□□□□ -2.61
Cldn2O88552 Mir297b-201ENSMUST00000102268 109 ntBASIC-1.26□□□□□ -2.61
Cldn2O88552 Gm24723-201ENSMUST00000158233 132 ntBASIC-1.26□□□□□ -2.61
Cldn2O88552 Gm24797-201ENSMUST00000178103 107 ntBASIC-1.26□□□□□ -2.61
Cldn2O88552 Mir34c-201ENSMUST00000083653 77 ntBASIC-1.26□□□□□ -2.61
Cldn2O88552 Gm43943-201ENSMUST00000204201 113 ntBASIC-1.27□□□□□ -2.61
Cldn2O88552 Gm37646-201ENSMUST00000191756 111 ntBASIC-1.28□□□□□ -2.61
Cldn2O88552 AC154832.1-201ENSMUST00000228928 141 ntBASIC-1.28□□□□□ -2.61
Cldn2O88552 Gm24047-201ENSMUST00000102405 104 ntBASIC-1.3□□□□□ -2.62
Cldn2O88552 Gm23812-201ENSMUST00000175156 84 ntBASIC-1.3□□□□□ -2.62
Cldn2O88552 Gm23374-201ENSMUST00000175408 84 ntBASIC-1.3□□□□□ -2.62
Cldn2O88552 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.3□□□□□ -2.62
Cldn2O88552 Gm25847-201ENSMUST00000116793 96 ntBASIC-1.31□□□□□ -2.62
Cldn2O88552 Gm22033-201ENSMUST00000116947 90 ntBASIC-1.31□□□□□ -2.62
Cldn2O88552 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.31□□□□□ -2.62
Cldn2O88552 Gm26139-201ENSMUST00000180098 107 ntBASIC-1.31□□□□□ -2.62
Cldn2O88552 Gm25429-201ENSMUST00000157607 132 ntBASIC-1.32□□□□□ -2.62
Cldn2O88552 Gm24725-201ENSMUST00000158229 125 ntBASIC-1.32□□□□□ -2.62
Cldn2O88552 Gm25903-201ENSMUST00000158492 103 ntBASIC-1.33□□□□□ -2.62
Cldn2O88552 Gm24051-201ENSMUST00000158622 75 ntBASIC-1.33□□□□□ -2.62
Cldn2O88552 Snord123-201ENSMUST00000158692 71 ntBASIC-1.33□□□□□ -2.62
Cldn2O88552 Gm23216-201ENSMUST00000179545 107 ntBASIC-1.33□□□□□ -2.62
Cldn2O88552 Mir7055-201ENSMUST00000197423 59 ntBASIC-1.33□□□□□ -2.62
Cldn2O88552 Mir6964-201ENSMUST00000200252 59 ntBASIC-1.33□□□□□ -2.62
Cldn2O88552 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.35□□□□□ -2.63
Cldn2O88552 Gm22039-201ENSMUST00000157278 132 ntBASIC-1.37□□□□□ -2.63
Cldn2O88552 Gm24197-201ENSMUST00000175085 109 ntBASIC-1.38□□□□□ -2.63
Cldn2O88552 Snord8-201ENSMUST00000175303 110 ntBASIC-1.38□□□□□ -2.63
Cldn2O88552 Mir543-201ENSMUST00000102286 76 ntBASIC-1.39□□□□□ -2.63
Cldn2O88552 Gm24297-201ENSMUST00000158300 68 ntBASIC-1.39□□□□□ -2.63
Cldn2O88552 Gm25995-201ENSMUST00000175396 142 ntBASIC-1.39□□□□□ -2.63
Cldn2O88552 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-1.39□□□□□ -2.63
Cldn2O88552 Mir367-201ENSMUST00000083479 75 ntBASIC-1.4□□□□□ -2.63
Cldn2O88552 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.42□□□□□ -2.64
Cldn2O88552 AC122210.2-201ENSMUST00000220216 115 ntBASIC-1.42□□□□□ -2.64
Cldn2O88552 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC-1.42□□□□□ -2.64
Cldn2O88552 Gm23613-201ENSMUST00000082596 87 ntBASIC-1.43□□□□□ -2.64
Cldn2O88552 n-R5s153-201ENSMUST00000083451 116 ntBASIC-1.45□□□□□ -2.64
Cldn2O88552 Gm23992-201ENSMUST00000174981 67 ntBASIC-1.46□□□□□ -2.64
Cldn2O88552 Gm25779-201ENSMUST00000116710 95 ntBASIC-1.47□□□□□ -2.64
Cldn2O88552 Gm25465-201ENSMUST00000157716 105 ntBASIC-1.47□□□□□ -2.64
Cldn2O88552 Gm24673-201ENSMUST00000116948 124 ntBASIC-1.48□□□□□ -2.65
Cldn2O88552 Gm22067-201ENSMUST00000122790 107 ntBASIC-1.48□□□□□ -2.65
Cldn2O88552 Gm23108-201ENSMUST00000178295 124 ntBASIC-1.48□□□□□ -2.65
Cldn2O88552 Gm27944-201ENSMUST00000185155 103 ntBASIC-1.48□□□□□ -2.65
Cldn2O88552 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.49□□□□□ -2.65
Cldn2O88552 Gm22071-201ENSMUST00000116857 83 ntBASIC-1.5□□□□□ -2.65
Cldn2O88552 Gm27645-201ENSMUST00000183348 77 ntBASIC-1.5□□□□□ -2.65
Cldn2O88552 Gm25023-201ENSMUST00000082977 107 ntBASIC-1.5□□□□□ -2.65
Cldn2O88552 Gm44347-201ENSMUST00000199602 108 ntBASIC-1.51□□□□□ -2.65
Cldn2O88552 Gm22078-201ENSMUST00000157593 103 ntBASIC-1.52□□□□□ -2.65
Cldn2O88552 Gm26052-201ENSMUST00000104646 84 ntBASIC-1.53□□□□□ -2.65
Cldn2O88552 Mir6339-201ENSMUST00000185120 117 ntBASIC-1.53□□□□□ -2.65
Cldn2O88552 Mir295-201ENSMUST00000104694 69 ntBASIC-1.54□□□□□ -2.66
Cldn2O88552 Gm25045-201ENSMUST00000122670 99 ntBASIC-1.54□□□□□ -2.66
Cldn2O88552 Gm24097-201ENSMUST00000178720 107 ntBASIC-1.55□□□□□ -2.66
Cldn2O88552 Gm23787-201ENSMUST00000122538 73 ntBASIC-1.56□□□□□ -2.66
Cldn2O88552 Gm26043-201ENSMUST00000116912 91 ntBASIC-1.57□□□□□ -2.66
Cldn2O88552 Gm23826-201ENSMUST00000157394 119 ntBASIC-1.57□□□□□ -2.66
Cldn2O88552 Mir466q-201ENSMUST00000175249 76 ntBASIC-1.58□□□□□ -2.66
Cldn2O88552 Gm23237-201ENSMUST00000104639 92 ntBASIC-1.59□□□□□ -2.66
Cldn2O88552 Gm25354-201ENSMUST00000179110 105 ntBASIC-1.59□□□□□ -2.66
Cldn2O88552 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.59□□□□□ -2.66
Cldn2O88552 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.59□□□□□ -2.66
Cldn2O88552 Gm22602-201ENSMUST00000157596 95 ntBASIC-1.6□□□□□ -2.67
Cldn2O88552 Gm24459-201ENSMUST00000082730 86 ntBASIC-1.6□□□□□ -2.67
Cldn2O88552 Gm23811-201ENSMUST00000175155 84 ntBASIC-1.61□□□□□ -2.67
Retrieved 100 of 76,532 protein–RNA pairs in 157.5 ms