Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm25712-201ENSMUST00000158634 93 ntBASIC-0.41□□□□□ -2.48
Col5a1O88207 AC157278.1-201ENSMUST00000221621 148 ntBASIC-0.41□□□□□ -2.48
Col5a1O88207 Gm23909-201ENSMUST00000104598 131 ntBASIC-0.42□□□□□ -2.48
Col5a1O88207 Gm26262-201ENSMUST00000158024 127 ntBASIC-0.42□□□□□ -2.48
Col5a1O88207 Gm23730-201ENSMUST00000083236 107 ntBASIC-0.42□□□□□ -2.48
Col5a1O88207 Gm27450-201ENSMUST00000104632 90 ntBASIC-0.43□□□□□ -2.48
Col5a1O88207 Gm24723-201ENSMUST00000158233 132 ntBASIC-0.43□□□□□ -2.48
Col5a1O88207 Gm24927-201ENSMUST00000083397 107 ntBASIC-0.43□□□□□ -2.48
Col5a1O88207 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC-0.43□□□□□ -2.48
Col5a1O88207 Gm22078-201ENSMUST00000157593 103 ntBASIC-0.43□□□□□ -2.48
Col5a1O88207 Snord8-201ENSMUST00000175303 110 ntBASIC-0.43□□□□□ -2.48
Col5a1O88207 Gm24797-201ENSMUST00000178103 107 ntBASIC-0.43□□□□□ -2.48
Col5a1O88207 Mir6957-201ENSMUST00000183708 64 ntBASIC-0.43□□□□□ -2.48
Col5a1O88207 Gm44311-201ENSMUST00000196448 69 ntBASIC-0.43□□□□□ -2.48
Col5a1O88207 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-0.43□□□□□ -2.48
Col5a1O88207 Gm24259-201ENSMUST00000083740 107 ntBASIC-0.43□□□□□ -2.48
Col5a1O88207 Gm22071-201ENSMUST00000116857 83 ntBASIC-0.44□□□□□ -2.48
Col5a1O88207 Gm22039-201ENSMUST00000157278 132 ntBASIC-0.44□□□□□ -2.48
Col5a1O88207 Gm23826-201ENSMUST00000157394 119 ntBASIC-0.44□□□□□ -2.48
Col5a1O88207 Gm22540-201ENSMUST00000158168 117 ntBASIC-0.44□□□□□ -2.48
Col5a1O88207 Gm26233-201ENSMUST00000175530 70 ntBASIC-0.44□□□□□ -2.48
Col5a1O88207 mt-Tl2-201ENSMUST00000082417 71 ntBASIC-0.44□□□□□ -2.48
Col5a1O88207 Gm25326-201ENSMUST00000101903 107 ntBASIC-0.45□□□□□ -2.48
Col5a1O88207 Gm25847-201ENSMUST00000116793 96 ntBASIC-0.45□□□□□ -2.48
Col5a1O88207 Gm22357-201ENSMUST00000082882 83 ntBASIC-0.45□□□□□ -2.48
Col5a1O88207 Gm23573-201ENSMUST00000104408 107 ntBASIC-0.45□□□□□ -2.48
Col5a1O88207 Gm26131-201ENSMUST00000082725 110 ntBASIC-0.45□□□□□ -2.48
Col5a1O88207 Gm23335-201ENSMUST00000117021 90 ntBASIC-0.46□□□□□ -2.48
Col5a1O88207 Gm22069-201ENSMUST00000179911 107 ntBASIC-0.46□□□□□ -2.48
Col5a1O88207 Gm24226-201ENSMUST00000158826 97 ntBASIC-0.47□□□□□ -2.48
Col5a1O88207 Gm24108-201ENSMUST00000175495 77 ntBASIC-0.47□□□□□ -2.48
Col5a1O88207 Gm22813-202ENSMUST00000200346 124 ntBASIC-0.47□□□□□ -2.48
Col5a1O88207 AC161271.1-201ENSMUST00000226914 150 ntBASIC-0.47□□□□□ -2.48
Col5a1O88207 Gm25652-201ENSMUST00000083780 103 ntBASIC-0.47□□□□□ -2.48
Col5a1O88207 Gm24714-201ENSMUST00000102382 101 ntBASIC-0.48□□□□□ -2.49
Col5a1O88207 Gm26124-201ENSMUST00000083359 108 ntBASIC-0.48□□□□□ -2.49
Col5a1O88207 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-0.48□□□□□ -2.49
Col5a1O88207 Gm24704-201ENSMUST00000093715 107 ntBASIC-0.48□□□□□ -2.49
Col5a1O88207 Gm24003-201ENSMUST00000158455 100 ntBASIC-0.49□□□□□ -2.49
Col5a1O88207 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-0.49□□□□□ -2.49
Col5a1O88207 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-0.49□□□□□ -2.49
Col5a1O88207 Mir302c-201ENSMUST00000083548 68 ntBASIC-0.49□□□□□ -2.49
Col5a1O88207 Gm24297-201ENSMUST00000158300 68 ntBASIC-0.5□□□□□ -2.49
Col5a1O88207 Gm25903-201ENSMUST00000158492 103 ntBASIC-0.5□□□□□ -2.49
Col5a1O88207 Gm23630-201ENSMUST00000175292 104 ntBASIC-0.5□□□□□ -2.49
Col5a1O88207 Gm37646-201ENSMUST00000191756 111 ntBASIC-0.5□□□□□ -2.49
Col5a1O88207 AC154832.1-201ENSMUST00000228928 141 ntBASIC-0.5□□□□□ -2.49
Col5a1O88207 Mir1969-201ENSMUST00000157623 94 ntBASIC-0.5□□□□□ -2.49
Col5a1O88207 Gm24197-201ENSMUST00000175085 109 ntBASIC-0.51□□□□□ -2.49
Col5a1O88207 Mir6961-201ENSMUST00000183874 67 ntBASIC-0.51□□□□□ -2.49
Col5a1O88207 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-0.51□□□□□ -2.49
Col5a1O88207 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-0.51□□□□□ -2.49
Col5a1O88207 Gm23166-201ENSMUST00000157164 101 ntBASIC-0.52□□□□□ -2.49
Col5a1O88207 Gm25429-201ENSMUST00000157607 132 ntBASIC-0.52□□□□□ -2.49
Col5a1O88207 Gm25045-201ENSMUST00000122670 99 ntBASIC-0.53□□□□□ -2.49
Col5a1O88207 Gm23904-201ENSMUST00000157567 124 ntBASIC-0.53□□□□□ -2.49
Col5a1O88207 Gm25862-201ENSMUST00000158250 129 ntBASIC-0.53□□□□□ -2.49
Col5a1O88207 Gm23992-201ENSMUST00000174981 67 ntBASIC-0.53□□□□□ -2.49
Col5a1O88207 Gm22938-201ENSMUST00000103956 120 ntBASIC-0.54□□□□□ -2.5
Col5a1O88207 Gm25465-201ENSMUST00000157716 105 ntBASIC-0.54□□□□□ -2.5
Col5a1O88207 Mir466q-201ENSMUST00000175249 76 ntBASIC-0.54□□□□□ -2.5
Col5a1O88207 Snord16a-201ENSMUST00000083895 99 ntBASIC-0.54□□□□□ -2.5
Col5a1O88207 Gm26139-201ENSMUST00000180098 107 ntBASIC-0.54□□□□□ -2.5
Col5a1O88207 Gm23974-201ENSMUST00000083321 131 ntBASIC-0.54□□□□□ -2.5
Col5a1O88207 Gm22197-201ENSMUST00000116866 58 ntBASIC-0.55□□□□□ -2.5
Col5a1O88207 Mir7055-201ENSMUST00000197423 59 ntBASIC-0.55□□□□□ -2.5
Col5a1O88207 Gm25995-201ENSMUST00000175396 142 ntBASIC-0.56□□□□□ -2.5
Col5a1O88207 AC122210.2-201ENSMUST00000220216 115 ntBASIC-0.56□□□□□ -2.5
Col5a1O88207 Gm23199-201ENSMUST00000158812 107 ntBASIC-0.57□□□□□ -2.5
Col5a1O88207 Gm23831-201ENSMUST00000158895 85 ntBASIC-0.57□□□□□ -2.5
Col5a1O88207 Gm22474-201ENSMUST00000179407 107 ntBASIC-0.57□□□□□ -2.5
Col5a1O88207 Gm23308-201ENSMUST00000179475 107 ntBASIC-0.57□□□□□ -2.5
Col5a1O88207 Gm43943-201ENSMUST00000204201 113 ntBASIC-0.57□□□□□ -2.5
Col5a1O88207 Gm23237-201ENSMUST00000104639 92 ntBASIC-0.58□□□□□ -2.5
Col5a1O88207 Gm24775-201ENSMUST00000157377 99 ntBASIC-0.58□□□□□ -2.5
Col5a1O88207 Gm24097-201ENSMUST00000178720 107 ntBASIC-0.58□□□□□ -2.5
Col5a1O88207 Mir297b-201ENSMUST00000102268 109 ntBASIC-0.59□□□□□ -2.5
Col5a1O88207 Gm22943-201ENSMUST00000158564 76 ntBASIC-0.59□□□□□ -2.5
Col5a1O88207 Gm25493-201ENSMUST00000157375 103 ntBASIC-0.6□□□□□ -2.51
Col5a1O88207 Gm24051-201ENSMUST00000158622 75 ntBASIC-0.6□□□□□ -2.51
Col5a1O88207 Snord123-201ENSMUST00000158692 71 ntBASIC-0.6□□□□□ -2.51
Col5a1O88207 Mir543-201ENSMUST00000102286 76 ntBASIC-0.61□□□□□ -2.51
Col5a1O88207 Gm22067-201ENSMUST00000122790 107 ntBASIC-0.61□□□□□ -2.51
Col5a1O88207 Gm24725-201ENSMUST00000158229 125 ntBASIC-0.62□□□□□ -2.51
Col5a1O88207 Gm23216-201ENSMUST00000179545 107 ntBASIC-0.62□□□□□ -2.51
Col5a1O88207 Gm25354-201ENSMUST00000179110 105 ntBASIC-0.63□□□□□ -2.51
Col5a1O88207 n-R5s153-201ENSMUST00000083451 116 ntBASIC-0.63□□□□□ -2.51
Col5a1O88207 Gm23787-201ENSMUST00000122538 73 ntBASIC-0.64□□□□□ -2.51
Col5a1O88207 Gm22446-201ENSMUST00000180108 104 ntBASIC-0.64□□□□□ -2.51
Col5a1O88207 Mir6339-201ENSMUST00000185120 117 ntBASIC-0.64□□□□□ -2.51
Col5a1O88207 Gm24459-201ENSMUST00000082730 86 ntBASIC-0.64□□□□□ -2.51
Col5a1O88207 Mir295-201ENSMUST00000104694 69 ntBASIC-0.64□□□□□ -2.51
Col5a1O88207 Gm27935-201ENSMUST00000183894 79 ntBASIC-0.64□□□□□ -2.51
Col5a1O88207 Gm25023-201ENSMUST00000082977 107 ntBASIC-0.64□□□□□ -2.51
Col5a1O88207 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-0.64□□□□□ -2.51
Col5a1O88207 Gm23811-201ENSMUST00000175155 84 ntBASIC-0.65□□□□□ -2.51
Col5a1O88207 Mir367-201ENSMUST00000083479 75 ntBASIC-0.65□□□□□ -2.51
Col5a1O88207 Gm25950-201ENSMUST00000175331 100 ntBASIC-0.66□□□□□ -2.51
Col5a1O88207 Gm27944-201ENSMUST00000185155 103 ntBASIC-0.66□□□□□ -2.51
Col5a1O88207 Gm23613-201ENSMUST00000082596 87 ntBASIC-0.66□□□□□ -2.51
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms