Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.26□□□□□ -2.45
H2afb3S4R1G7 Gm24772-201ENSMUST00000158507 110 ntBASIC-0.26□□□□□ -2.45
H2afb3S4R1G7 AC167019.1-201ENSMUST00000227913 106 ntBASIC-0.26□□□□□ -2.45
H2afb3S4R1G7 Gm24259-201ENSMUST00000083740 107 ntBASIC-0.26□□□□□ -2.45
H2afb3S4R1G7 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC-0.27□□□□□ -2.45
H2afb3S4R1G7 Gm24723-201ENSMUST00000158233 132 ntBASIC-0.27□□□□□ -2.45
H2afb3S4R1G7 Gm23180-201ENSMUST00000158686 125 ntBASIC-0.27□□□□□ -2.45
H2afb3S4R1G7 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-0.27□□□□□ -2.45
H2afb3S4R1G7 Mir702-201ENSMUST00000102285 109 ntBASIC-0.28□□□□□ -2.45
H2afb3S4R1G7 Gm23607-201ENSMUST00000104550 126 ntBASIC-0.28□□□□□ -2.45
H2afb3S4R1G7 Gm24903-201ENSMUST00000158131 126 ntBASIC-0.29□□□□□ -2.46
H2afb3S4R1G7 Gm25137-201ENSMUST00000083251 110 ntBASIC-0.29□□□□□ -2.46
H2afb3S4R1G7 Gm24996-201ENSMUST00000158390 99 ntBASIC-0.3□□□□□ -2.46
H2afb3S4R1G7 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.3□□□□□ -2.46
H2afb3S4R1G7 Gm24396-201ENSMUST00000116905 93 ntBASIC-0.31□□□□□ -2.46
H2afb3S4R1G7 Gm22746-201ENSMUST00000082494 107 ntBASIC-0.31□□□□□ -2.46
H2afb3S4R1G7 Mir672-201ENSMUST00000102331 100 ntBASIC-0.32□□□□□ -2.46
H2afb3S4R1G7 Gm25158-201ENSMUST00000177681 121 ntBASIC-0.32□□□□□ -2.46
H2afb3S4R1G7 Gm26229-201ENSMUST00000179699 121 ntBASIC-0.32□□□□□ -2.46
H2afb3S4R1G7 Gm24336-201ENSMUST00000104203 146 ntBASIC-0.33□□□□□ -2.46
H2afb3S4R1G7 Gm22149-201ENSMUST00000104442 136 ntBASIC-0.33□□□□□ -2.46
H2afb3S4R1G7 Gm24797-201ENSMUST00000178103 107 ntBASIC-0.33□□□□□ -2.46
H2afb3S4R1G7 Gm42773-201ENSMUST00000196962 148 ntBASIC-0.33□□□□□ -2.46
H2afb3S4R1G7 AC161271.1-201ENSMUST00000226914 150 ntBASIC-0.33□□□□□ -2.46
H2afb3S4R1G7 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.33□□□□□ -2.46
H2afb3S4R1G7 Gm24701-201ENSMUST00000101946 105 ntBASIC-0.34□□□□□ -2.46
H2afb3S4R1G7 Mir1948-201ENSMUST00000157325 85 ntBASIC-0.34□□□□□ -2.46
H2afb3S4R1G7 Gm24256-201ENSMUST00000083696 84 ntBASIC-0.34□□□□□ -2.46
H2afb3S4R1G7 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC-0.35□□□□□ -2.47
H2afb3S4R1G7 Gm23531-201ENSMUST00000104567 68 ntBASIC-0.36□□□□□ -2.47
H2afb3S4R1G7 Mir7079-201ENSMUST00000184697 69 ntBASIC-0.36□□□□□ -2.47
H2afb3S4R1G7 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.37□□□□□ -2.47
H2afb3S4R1G7 Gm23783-201ENSMUST00000157941 102 ntBASIC-0.37□□□□□ -2.47
H2afb3S4R1G7 Gm22088-201ENSMUST00000158341 117 ntBASIC-0.37□□□□□ -2.47
H2afb3S4R1G7 Mir3089-201ENSMUST00000175350 84 ntBASIC-0.37□□□□□ -2.47
H2afb3S4R1G7 Mir96-201ENSMUST00000083652 106 ntBASIC-0.37□□□□□ -2.47
H2afb3S4R1G7 Gm26375-201ENSMUST00000101829 106 ntBASIC-0.38□□□□□ -2.47
H2afb3S4R1G7 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.38□□□□□ -2.47
H2afb3S4R1G7 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.38□□□□□ -2.47
H2afb3S4R1G7 Gm22357-201ENSMUST00000082882 83 ntBASIC-0.39□□□□□ -2.47
H2afb3S4R1G7 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.4□□□□□ -2.47
H2afb3S4R1G7 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.4□□□□□ -2.47
H2afb3S4R1G7 Gm25465-201ENSMUST00000157716 105 ntBASIC-0.41□□□□□ -2.48
H2afb3S4R1G7 Gm22305-201ENSMUST00000082690 108 ntBASIC-0.41□□□□□ -2.48
H2afb3S4R1G7 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.42□□□□□ -2.48
H2afb3S4R1G7 Mir191-201ENSMUST00000196210 74 ntBASIC-0.43□□□□□ -2.48
H2afb3S4R1G7 Gm23909-201ENSMUST00000104598 131 ntBASIC-0.44□□□□□ -2.48
H2afb3S4R1G7 Gm26052-201ENSMUST00000104646 84 ntBASIC-0.44□□□□□ -2.48
H2afb3S4R1G7 Mir18b-201ENSMUST00000103923 83 ntBASIC-0.45□□□□□ -2.48
H2afb3S4R1G7 Gm25375-201ENSMUST00000158157 135 ntBASIC-0.45□□□□□ -2.48
H2afb3S4R1G7 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.46□□□□□ -2.48
H2afb3S4R1G7 Gm25862-201ENSMUST00000158250 129 ntBASIC-0.48□□□□□ -2.49
H2afb3S4R1G7 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.48□□□□□ -2.49
H2afb3S4R1G7 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.49□□□□□ -2.49
H2afb3S4R1G7 Mir214-201ENSMUST00000083582 110 ntBASIC-0.5□□□□□ -2.49
H2afb3S4R1G7 Mir669a-3-201ENSMUST00000102074 109 ntBASIC-0.51□□□□□ -2.49
H2afb3S4R1G7 n-R5s8-201ENSMUST00000104121 118 ntBASIC-0.51□□□□□ -2.49
H2afb3S4R1G7 Gm25247-201ENSMUST00000175475 90 ntBASIC-0.51□□□□□ -2.49
H2afb3S4R1G7 Mir7094-2-201ENSMUST00000184622 60 ntBASIC-0.51□□□□□ -2.49
H2afb3S4R1G7 Mir7094-1-201ENSMUST00000199671 60 ntBASIC-0.51□□□□□ -2.49
H2afb3S4R1G7 Gm23994-201ENSMUST00000158059 88 ntBASIC-0.52□□□□□ -2.49
H2afb3S4R1G7 Gm22401-201ENSMUST00000174927 117 ntBASIC-0.53□□□□□ -2.49
H2afb3S4R1G7 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.53□□□□□ -2.49
H2afb3S4R1G7 Mir378c-201ENSMUST00000184478 99 ntBASIC-0.53□□□□□ -2.49
H2afb3S4R1G7 Mir136-201ENSMUST00000199494 62 ntBASIC-0.53□□□□□ -2.49
H2afb3S4R1G7 Gm25779-201ENSMUST00000116710 95 ntBASIC-0.54□□□□□ -2.5
H2afb3S4R1G7 Gm24297-201ENSMUST00000158300 68 ntBASIC-0.54□□□□□ -2.5
H2afb3S4R1G7 Gm22474-201ENSMUST00000179407 107 ntBASIC-0.55□□□□□ -2.5
H2afb3S4R1G7 Gm25787-201ENSMUST00000104709 92 ntBASIC-0.56□□□□□ -2.5
H2afb3S4R1G7 Gm23787-201ENSMUST00000122538 73 ntBASIC-0.56□□□□□ -2.5
H2afb3S4R1G7 Gm25388-201ENSMUST00000157339 151 ntBASIC-0.56□□□□□ -2.5
H2afb3S4R1G7 Gm23278-201ENSMUST00000157911 143 ntBASIC-0.56□□□□□ -2.5
H2afb3S4R1G7 Mir6957-201ENSMUST00000183708 64 ntBASIC-0.56□□□□□ -2.5
H2afb3S4R1G7 Mir1839-201ENSMUST00000175366 127 ntBASIC-0.57□□□□□ -2.5
H2afb3S4R1G7 Gm22962-201ENSMUST00000157962 73 ntBASIC-0.58□□□□□ -2.5
H2afb3S4R1G7 Mir8116-201ENSMUST00000184134 97 ntBASIC-0.59□□□□□ -2.5
H2afb3S4R1G7 Mir677-202ENSMUST00000197076 78 ntBASIC-0.59□□□□□ -2.5
H2afb3S4R1G7 Gm19248-201ENSMUST00000209404 110 ntBASIC-0.59□□□□□ -2.5
H2afb3S4R1G7 Gm23904-201ENSMUST00000157567 124 ntBASIC-0.6□□□□□ -2.51
H2afb3S4R1G7 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.6□□□□□ -2.51
H2afb3S4R1G7 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.6□□□□□ -2.51
H2afb3S4R1G7 Gm44589-201ENSMUST00000207025 115 ntBASIC-0.6□□□□□ -2.51
H2afb3S4R1G7 Gm22340-201ENSMUST00000157717 114 ntBASIC-0.61□□□□□ -2.51
H2afb3S4R1G7 Gm22197-201ENSMUST00000116866 58 ntBASIC-0.62□□□□□ -2.51
H2afb3S4R1G7 Gm25712-201ENSMUST00000158634 93 ntBASIC-0.62□□□□□ -2.51
H2afb3S4R1G7 Mir6905-201ENSMUST00000184228 70 ntBASIC-0.62□□□□□ -2.51
H2afb3S4R1G7 Snord16a-201ENSMUST00000083895 99 ntBASIC-0.62□□□□□ -2.51
H2afb3S4R1G7 Mir6915-201ENSMUST00000198839 69 ntBASIC-0.63□□□□□ -2.51
H2afb3S4R1G7 Mir669f-201ENSMUST00000103850 121 ntBASIC-0.64□□□□□ -2.51
H2afb3S4R1G7 Gm25885-201ENSMUST00000157779 109 ntBASIC-0.64□□□□□ -2.51
H2afb3S4R1G7 Gm25225-201ENSMUST00000158197 102 ntBASIC-0.64□□□□□ -2.51
H2afb3S4R1G7 Gm25222-201ENSMUST00000158199 126 ntBASIC-0.64□□□□□ -2.51
H2afb3S4R1G7 Gm25903-201ENSMUST00000158492 103 ntBASIC-0.64□□□□□ -2.51
H2afb3S4R1G7 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC-0.65□□□□□ -2.51
H2afb3S4R1G7 Gm23749-201ENSMUST00000104223 131 ntBASIC-0.65□□□□□ -2.51
H2afb3S4R1G7 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.65□□□□□ -2.51
H2afb3S4R1G7 Mir5124b-201ENSMUST00000184251 85 ntBASIC-0.65□□□□□ -2.51
H2afb3S4R1G7 Gm37646-201ENSMUST00000191756 111 ntBASIC-0.65□□□□□ -2.51
H2afb3S4R1G7 Gm25431-201ENSMUST00000101978 107 ntBASIC-0.67□□□□□ -2.52
H2afb3S4R1G7 Gm25524-201ENSMUST00000101821 107 ntBASIC-0.68□□□□□ -2.52
Retrieved 100 of 76,532 protein–RNA pairs in 291.1 ms