Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm23787-201ENSMUST00000122538 73 ntBASIC0.24□□□□□ -2.37
Trim39Q9ESN2 Mir1948-201ENSMUST00000157325 85 ntBASIC0.24□□□□□ -2.37
Trim39Q9ESN2 Mir6365-201ENSMUST00000183990 101 ntBASIC0.23□□□□□ -2.37
Trim39Q9ESN2 Gm44375-201ENSMUST00000196657 150 ntBASIC0.22□□□□□ -2.37
Trim39Q9ESN2 Mir710-201ENSMUST00000102088 110 ntBASIC0.21□□□□□ -2.38
Trim39Q9ESN2 Mir702-201ENSMUST00000102285 109 ntBASIC0.21□□□□□ -2.38
Trim39Q9ESN2 Gm25952-201ENSMUST00000175329 74 ntBASIC0.21□□□□□ -2.38
Trim39Q9ESN2 Gm25158-201ENSMUST00000177681 121 ntBASIC0.21□□□□□ -2.38
Trim39Q9ESN2 Gm26229-201ENSMUST00000179699 121 ntBASIC0.21□□□□□ -2.38
Trim39Q9ESN2 Mir219b-201ENSMUST00000198317 65 ntBASIC0.21□□□□□ -2.38
Trim39Q9ESN2 Snord85-201ENSMUST00000083262 73 ntBASIC0.21□□□□□ -2.38
Trim39Q9ESN2 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC0.2□□□□□ -2.38
Trim39Q9ESN2 Gm23783-201ENSMUST00000157941 102 ntBASIC0.2□□□□□ -2.38
Trim39Q9ESN2 Gm24772-201ENSMUST00000158507 110 ntBASIC0.2□□□□□ -2.38
Trim39Q9ESN2 Gm24218-201ENSMUST00000180163 105 ntBASIC0.2□□□□□ -2.38
Trim39Q9ESN2 Gm26259-201ENSMUST00000104778 97 ntBASIC0.19□□□□□ -2.38
Trim39Q9ESN2 Gm25375-201ENSMUST00000158157 135 ntBASIC0.19□□□□□ -2.38
Trim39Q9ESN2 Gm23347-201ENSMUST00000083823 82 ntBASIC0.19□□□□□ -2.38
Trim39Q9ESN2 Gm23607-201ENSMUST00000104550 126 ntBASIC0.18□□□□□ -2.38
Trim39Q9ESN2 Mir7077-201ENSMUST00000183991 57 ntBASIC0.18□□□□□ -2.38
Trim39Q9ESN2 Gm44490-201ENSMUST00000198566 127 ntBASIC0.18□□□□□ -2.38
Trim39Q9ESN2 Gm22127-201ENSMUST00000083239 106 ntBASIC0.17□□□□□ -2.38
Trim39Q9ESN2 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.16□□□□□ -2.38
Trim39Q9ESN2 Gm23531-201ENSMUST00000104567 68 ntBASIC0.15□□□□□ -2.39
Trim39Q9ESN2 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC0.15□□□□□ -2.39
Trim39Q9ESN2 Gm22340-201ENSMUST00000157717 114 ntBASIC0.15□□□□□ -2.39
Trim39Q9ESN2 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.15□□□□□ -2.39
Trim39Q9ESN2 Snord42b-201ENSMUST00000083742 69 ntBASIC0.14□□□□□ -2.39
Trim39Q9ESN2 Gm22368-201ENSMUST00000102416 109 ntBASIC0.13□□□□□ -2.39
Trim39Q9ESN2 Gm22879-201ENSMUST00000082895 74 ntBASIC0.13□□□□□ -2.39
Trim39Q9ESN2 Gm22327-201ENSMUST00000158899 108 ntBASIC0.11□□□□□ -2.39
Trim39Q9ESN2 Gm24971-201ENSMUST00000175581 110 ntBASIC0.11□□□□□ -2.39
Trim39Q9ESN2 Gm22088-201ENSMUST00000158341 117 ntBASIC0.07□□□□□ -2.4
Trim39Q9ESN2 Gm25249-201ENSMUST00000175471 78 ntBASIC0.07□□□□□ -2.4
Trim39Q9ESN2 Gm25247-201ENSMUST00000175475 90 ntBASIC0.07□□□□□ -2.4
Trim39Q9ESN2 Gm24445-201ENSMUST00000083981 107 ntBASIC0.07□□□□□ -2.4
Trim39Q9ESN2 Gm25903-201ENSMUST00000158492 103 ntBASIC0.06□□□□□ -2.4
Trim39Q9ESN2 Gm26210-201ENSMUST00000158680 91 ntBASIC0.06□□□□□ -2.4
Trim39Q9ESN2 Mir382-201ENSMUST00000083494 76 ntBASIC0.06□□□□□ -2.4
Trim39Q9ESN2 Mir1955-201ENSMUST00000158014 98 ntBASIC0.04□□□□□ -2.4
Trim39Q9ESN2 Gm25137-201ENSMUST00000083251 110 ntBASIC0.04□□□□□ -2.4
Trim39Q9ESN2 Gm25703-201ENSMUST00000083123 151 ntBASIC0.03□□□□□ -2.4
Trim39Q9ESN2 Gm22324-201ENSMUST00000158903 114 ntBASIC0.02□□□□□ -2.41
Trim39Q9ESN2 Gm27607-201ENSMUST00000185162 122 ntBASIC0.02□□□□□ -2.41
Trim39Q9ESN2 Mir6896-201ENSMUST00000198033 73 ntBASIC0.02□□□□□ -2.41
Trim39Q9ESN2 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.02□□□□□ -2.41
Trim39Q9ESN2 Gm25862-201ENSMUST00000158250 129 ntBASIC0.01□□□□□ -2.41
Trim39Q9ESN2 Mir3089-201ENSMUST00000175350 84 ntBASIC0.01□□□□□ -2.41
Trim39Q9ESN2 Gm22813-201ENSMUST00000199948 123 ntBASIC0.01□□□□□ -2.41
Trim39Q9ESN2 AC167019.1-201ENSMUST00000227913 106 ntBASIC0.01□□□□□ -2.41
Trim39Q9ESN2 Gm23909-201ENSMUST00000104598 131 ntBASIC0□□□□□ -2.41
Trim39Q9ESN2 Gm42773-201ENSMUST00000196962 148 ntBASIC0□□□□□ -2.41
Trim39Q9ESN2 AL845349.1-201ENSMUST00000213794 78 ntBASIC0□□□□□ -2.41
Trim39Q9ESN2 Mir669f-201ENSMUST00000103850 121 ntBASIC-0.01□□□□□ -2.41
Trim39Q9ESN2 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.01□□□□□ -2.41
Trim39Q9ESN2 Gm23992-201ENSMUST00000174981 67 ntBASIC-0.01□□□□□ -2.41
Trim39Q9ESN2 Gm37646-201ENSMUST00000191756 111 ntBASIC-0.01□□□□□ -2.41
Trim39Q9ESN2 Gm23994-201ENSMUST00000158059 88 ntBASIC-0.02□□□□□ -2.41
Trim39Q9ESN2 Gm23278-201ENSMUST00000157911 143 ntBASIC-0.03□□□□□ -2.41
Trim39Q9ESN2 n-R5s96-201ENSMUST00000082574 124 ntBASIC-0.03□□□□□ -2.41
Trim39Q9ESN2 Gm24459-201ENSMUST00000082730 86 ntBASIC-0.03□□□□□ -2.41
Trim39Q9ESN2 Mir18b-201ENSMUST00000103923 83 ntBASIC-0.04□□□□□ -2.42
Trim39Q9ESN2 Gm25472-201ENSMUST00000175454 78 ntBASIC-0.05□□□□□ -2.42
Trim39Q9ESN2 Mir297b-201ENSMUST00000102268 109 ntBASIC-0.06□□□□□ -2.42
Trim39Q9ESN2 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
Trim39Q9ESN2 Gm26306-201ENSMUST00000157773 119 ntBASIC-0.06□□□□□ -2.42
Trim39Q9ESN2 Gm24336-201ENSMUST00000104203 146 ntBASIC-0.07□□□□□ -2.42
Trim39Q9ESN2 Gm24256-201ENSMUST00000083696 84 ntBASIC-0.07□□□□□ -2.42
Trim39Q9ESN2 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.08□□□□□ -2.42
Trim39Q9ESN2 Mir125b-1-201ENSMUST00000175613 77 ntBASIC-0.08□□□□□ -2.42
Trim39Q9ESN2 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.08□□□□□ -2.42
Trim39Q9ESN2 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.09□□□□□ -2.42
Trim39Q9ESN2 Gm23749-201ENSMUST00000104223 131 ntBASIC-0.09□□□□□ -2.42
Trim39Q9ESN2 Gm22305-201ENSMUST00000082690 108 ntBASIC-0.09□□□□□ -2.42
Trim39Q9ESN2 Gm24455-201ENSMUST00000083348 131 ntBASIC-0.09□□□□□ -2.42
Trim39Q9ESN2 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.1□□□□□ -2.43
Trim39Q9ESN2 Gm24651-201ENSMUST00000157107 107 ntBASIC-0.11□□□□□ -2.43
Trim39Q9ESN2 Gm24467-201ENSMUST00000157887 126 ntBASIC-0.11□□□□□ -2.43
Trim39Q9ESN2 Gm24531-201ENSMUST00000157945 100 ntBASIC-0.11□□□□□ -2.43
Trim39Q9ESN2 Gm22260-201ENSMUST00000178643 107 ntBASIC-0.11□□□□□ -2.43
Trim39Q9ESN2 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.11□□□□□ -2.43
Trim39Q9ESN2 Gm25497-201ENSMUST00000104425 132 ntBASIC-0.12□□□□□ -2.43
Trim39Q9ESN2 Gm24903-201ENSMUST00000158131 126 ntBASIC-0.12□□□□□ -2.43
Trim39Q9ESN2 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.13□□□□□ -2.43
Trim39Q9ESN2 Mir5124a-201ENSMUST00000175528 72 ntBASIC-0.13□□□□□ -2.43
Trim39Q9ESN2 Gm22301-201ENSMUST00000082656 107 ntBASIC-0.13□□□□□ -2.43
Trim39Q9ESN2 Mir295-201ENSMUST00000104694 69 ntBASIC-0.16□□□□□ -2.44
Trim39Q9ESN2 Gm22056-201ENSMUST00000083386 81 ntBASIC-0.16□□□□□ -2.44
Trim39Q9ESN2 Mir136-201ENSMUST00000199494 62 ntBASIC-0.17□□□□□ -2.44
Trim39Q9ESN2 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.17□□□□□ -2.44
Trim39Q9ESN2 Mir672-201ENSMUST00000102331 100 ntBASIC-0.18□□□□□ -2.44
Trim39Q9ESN2 Gm22962-201ENSMUST00000157962 73 ntBASIC-0.18□□□□□ -2.44
Trim39Q9ESN2 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.18□□□□□ -2.44
Trim39Q9ESN2 Gm24793-201ENSMUST00000104289 132 ntBASIC-0.2□□□□□ -2.44
Trim39Q9ESN2 Gm24372-201ENSMUST00000104400 110 ntBASIC-0.2□□□□□ -2.44
Trim39Q9ESN2 Gm25885-201ENSMUST00000157779 109 ntBASIC-0.2□□□□□ -2.44
Trim39Q9ESN2 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.2□□□□□ -2.44
Trim39Q9ESN2 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC-0.2□□□□□ -2.44
Trim39Q9ESN2 Mir191-201ENSMUST00000196210 74 ntBASIC-0.22□□□□□ -2.44
Trim39Q9ESN2 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-0.22□□□□□ -2.44
Retrieved 100 of 76,532 protein–RNA pairs in 176.8 ms