Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Mir297a-2-201ENSMUST00000103795 90 ntBASIC-1.51□□□□□ -2.65
Scn4aQ9ER60 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC-1.51□□□□□ -2.65
Scn4aQ9ER60 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.51□□□□□ -2.65
Scn4aQ9ER60 Gm24705-201ENSMUST00000082808 107 ntBASIC-1.51□□□□□ -2.65
Scn4aQ9ER60 Gm23678-201ENSMUST00000083157 107 ntBASIC-1.51□□□□□ -2.65
Scn4aQ9ER60 Gm11333-201ENSMUST00000119479 148 ntBASIC-1.52□□□□□ -2.65
Scn4aQ9ER60 Gm24003-201ENSMUST00000158455 100 ntBASIC-1.52□□□□□ -2.65
Scn4aQ9ER60 AC158537.2-201ENSMUST00000223575 150 ntBASIC-1.54□□□□□ -2.66
Scn4aQ9ER60 Mir876-201ENSMUST00000104659 81 ntBASIC-1.54□□□□□ -2.66
Scn4aQ9ER60 Gm26441-201ENSMUST00000082590 104 ntBASIC-1.54□□□□□ -2.66
Scn4aQ9ER60 Gm25812-201ENSMUST00000082751 103 ntBASIC-1.54□□□□□ -2.66
Scn4aQ9ER60 AC122327.1-201ENSMUST00000220778 108 ntBASIC-1.55□□□□□ -2.66
Scn4aQ9ER60 Gm24400-201ENSMUST00000157865 107 ntBASIC-1.56□□□□□ -2.66
Scn4aQ9ER60 Gm24051-201ENSMUST00000158622 75 ntBASIC-1.56□□□□□ -2.66
Scn4aQ9ER60 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-1.56□□□□□ -2.66
Scn4aQ9ER60 Snora2b-201ENSMUST00000084005 137 ntBASIC-1.56□□□□□ -2.66
Scn4aQ9ER60 Gm23468-201ENSMUST00000157125 108 ntBASIC-1.57□□□□□ -2.66
Scn4aQ9ER60 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.57□□□□□ -2.66
Scn4aQ9ER60 Gm26499-201ENSMUST00000178544 79 ntBASIC-1.57□□□□□ -2.66
Scn4aQ9ER60 Gm26096-201ENSMUST00000179084 79 ntBASIC-1.57□□□□□ -2.66
Scn4aQ9ER60 Gm24650-201ENSMUST00000157105 103 ntBASIC-1.59□□□□□ -2.66
Scn4aQ9ER60 Gm25429-201ENSMUST00000157607 132 ntBASIC-1.59□□□□□ -2.66
Scn4aQ9ER60 Gm23790-201ENSMUST00000083013 107 ntBASIC-1.59□□□□□ -2.66
Scn4aQ9ER60 Gm25987-201ENSMUST00000083234 107 ntBASIC-1.59□□□□□ -2.66
Scn4aQ9ER60 Gm24612-201ENSMUST00000083267 107 ntBASIC-1.59□□□□□ -2.66
Scn4aQ9ER60 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.6□□□□□ -2.67
Scn4aQ9ER60 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.6□□□□□ -2.67
Scn4aQ9ER60 Gm23240-201ENSMUST00000083009 121 ntBASIC-1.62□□□□□ -2.67
Scn4aQ9ER60 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.63□□□□□ -2.67
Scn4aQ9ER60 Gm22298-201ENSMUST00000082662 133 ntBASIC-1.63□□□□□ -2.67
Scn4aQ9ER60 AC160962.3-201ENSMUST00000225914 112 ntBASIC-1.63□□□□□ -2.67
Scn4aQ9ER60 Mir702-201ENSMUST00000102285 109 ntBASIC-1.64□□□□□ -2.67
Scn4aQ9ER60 Mir7086-201ENSMUST00000183683 65 ntBASIC-1.65□□□□□ -2.67
Scn4aQ9ER60 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.66□□□□□ -2.68
Scn4aQ9ER60 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.67□□□□□ -2.68
Scn4aQ9ER60 Gm26253-201ENSMUST00000122493 103 ntBASIC-1.68□□□□□ -2.68
Scn4aQ9ER60 Gm25854-201ENSMUST00000082792 72 ntBASIC-1.68□□□□□ -2.68
Scn4aQ9ER60 Gm23607-201ENSMUST00000104550 126 ntBASIC-1.69□□□□□ -2.68
Scn4aQ9ER60 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC-1.7□□□□□ -2.68
Scn4aQ9ER60 Gm24946-201ENSMUST00000158332 106 ntBASIC-1.7□□□□□ -2.68
Scn4aQ9ER60 Gm23421-201ENSMUST00000158934 104 ntBASIC-1.7□□□□□ -2.68
Scn4aQ9ER60 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.72□□□□□ -2.68
Scn4aQ9ER60 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.72□□□□□ -2.68
Scn4aQ9ER60 Gm22458-201ENSMUST00000082576 107 ntBASIC-1.72□□□□□ -2.68
Scn4aQ9ER60 Gm23909-201ENSMUST00000104598 131 ntBASIC-1.73□□□□□ -2.69
Scn4aQ9ER60 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.73□□□□□ -2.69
Scn4aQ9ER60 Gm23644-201ENSMUST00000157856 77 ntBASIC-1.73□□□□□ -2.69
Scn4aQ9ER60 Gm22805-201ENSMUST00000082739 107 ntBASIC-1.73□□□□□ -2.69
Scn4aQ9ER60 Gm27798-201ENSMUST00000184989 71 ntBASIC-1.74□□□□□ -2.69
Scn4aQ9ER60 Mir7231-201ENSMUST00000196252 61 ntBASIC-1.75□□□□□ -2.69
Scn4aQ9ER60 Gm2077-201ENSMUST00000195017 319 ntBASIC-1.76□□□□□ -2.69
Scn4aQ9ER60 Mir7218-201ENSMUST00000200050 59 ntBASIC-1.76□□□□□ -2.69
Scn4aQ9ER60 Gm24492-201ENSMUST00000083798 107 ntBASIC-1.76□□□□□ -2.69
Scn4aQ9ER60 Mir494-201ENSMUST00000093632 85 ntBASIC-1.76□□□□□ -2.69
Scn4aQ9ER60 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-1.77□□□□□ -2.69
Scn4aQ9ER60 Gm25289-201ENSMUST00000122799 119 ntBASIC-1.78□□□□□ -2.69
Scn4aQ9ER60 Gm23477-201ENSMUST00000158882 128 ntBASIC-1.78□□□□□ -2.69
Scn4aQ9ER60 Gm24162-201ENSMUST00000093665 102 ntBASIC-1.78□□□□□ -2.69
Scn4aQ9ER60 Gm25158-201ENSMUST00000177681 121 ntBASIC-1.79□□□□□ -2.7
Scn4aQ9ER60 Gm26229-201ENSMUST00000179699 121 ntBASIC-1.79□□□□□ -2.7
Scn4aQ9ER60 Gm23244-201ENSMUST00000083375 92 ntBASIC-1.79□□□□□ -2.7
Scn4aQ9ER60 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.8□□□□□ -2.7
Scn4aQ9ER60 Gm23590-201ENSMUST00000157661 104 ntBASIC-1.8□□□□□ -2.7
Scn4aQ9ER60 Gm23570-201ENSMUST00000083029 104 ntBASIC-1.8□□□□□ -2.7
Scn4aQ9ER60 Gm22842-201ENSMUST00000157709 118 ntBASIC-1.81□□□□□ -2.7
Scn4aQ9ER60 CT030170.1-201ENSMUST00000222183 148 ntBASIC-1.81□□□□□ -2.7
Scn4aQ9ER60 Gm24148-201ENSMUST00000082762 80 ntBASIC-1.81□□□□□ -2.7
Scn4aQ9ER60 Gm26491-201ENSMUST00000179268 121 ntBASIC-1.82□□□□□ -2.7
Scn4aQ9ER60 Mir15b-201ENSMUST00000083646 64 ntBASIC-1.83□□□□□ -2.7
Scn4aQ9ER60 Gm25380-201ENSMUST00000175463 107 ntBASIC-1.84□□□□□ -2.7
Scn4aQ9ER60 Gm24641-201ENSMUST00000178055 107 ntBASIC-1.84□□□□□ -2.7
Scn4aQ9ER60 Gm25484-201ENSMUST00000178217 107 ntBASIC-1.84□□□□□ -2.7
Scn4aQ9ER60 Gm26138-201ENSMUST00000179236 107 ntBASIC-1.84□□□□□ -2.7
Scn4aQ9ER60 Gm22821-201ENSMUST00000179288 107 ntBASIC-1.84□□□□□ -2.7
Scn4aQ9ER60 Gm23298-201ENSMUST00000083181 107 ntBASIC-1.84□□□□□ -2.7
Scn4aQ9ER60 Gm22057-201ENSMUST00000083387 107 ntBASIC-1.84□□□□□ -2.7
Scn4aQ9ER60 Mir122-201ENSMUST00000083468 66 ntBASIC-1.84□□□□□ -2.7
Scn4aQ9ER60 Gm25516-201ENSMUST00000083857 107 ntBASIC-1.84□□□□□ -2.7
Scn4aQ9ER60 Gm26375-201ENSMUST00000101829 106 ntBASIC-1.85□□□□□ -2.71
Scn4aQ9ER60 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-1.85□□□□□ -2.71
Scn4aQ9ER60 Gm25740-201ENSMUST00000180247 107 ntBASIC-1.85□□□□□ -2.71
Scn4aQ9ER60 Gm22828-201ENSMUST00000083768 107 ntBASIC-1.85□□□□□ -2.71
Scn4aQ9ER60 Gm25542-201ENSMUST00000116889 94 ntBASIC-1.86□□□□□ -2.71
Scn4aQ9ER60 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-1.87□□□□□ -2.71
Scn4aQ9ER60 Mir1950-201ENSMUST00000158526 74 ntBASIC-1.87□□□□□ -2.71
Scn4aQ9ER60 Gm25112-201ENSMUST00000122680 104 ntBASIC-1.88□□□□□ -2.71
Scn4aQ9ER60 Gm23306-201ENSMUST00000179058 105 ntBASIC-1.88□□□□□ -2.71
Scn4aQ9ER60 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-1.89□□□□□ -2.71
Scn4aQ9ER60 AC122210.2-201ENSMUST00000220216 115 ntBASIC-1.89□□□□□ -2.71
Scn4aQ9ER60 Gm26125-201ENSMUST00000083357 107 ntBASIC-1.89□□□□□ -2.71
Scn4aQ9ER60 Gm22729-201ENSMUST00000158088 129 ntBASIC-1.9□□□□□ -2.71
Scn4aQ9ER60 Gm22381-201ENSMUST00000158186 107 ntBASIC-1.91□□□□□ -2.72
Scn4aQ9ER60 Gm24988-201ENSMUST00000104460 121 ntBASIC-1.92□□□□□ -2.72
Scn4aQ9ER60 Gm22464-201ENSMUST00000175273 64 ntBASIC-1.93□□□□□ -2.72
Scn4aQ9ER60 Gm22213-201ENSMUST00000157564 119 ntBASIC-1.95□□□□□ -2.72
Scn4aQ9ER60 Gm25862-201ENSMUST00000158250 129 ntBASIC-1.95□□□□□ -2.72
Scn4aQ9ER60 Gm27987-201ENSMUST00000184023 93 ntBASIC-1.96□□□□□ -2.72
Scn4aQ9ER60 Gm25815-201ENSMUST00000082755 107 ntBASIC-1.96□□□□□ -2.72
Scn4aQ9ER60 Gm25644-201ENSMUST00000083209 107 ntBASIC-1.96□□□□□ -2.72
Scn4aQ9ER60 Gm26051-201ENSMUST00000104642 93 ntBASIC-1.97□□□□□ -2.72
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms