Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm24946-201ENSMUST00000158332 106 ntBASIC-1.62□□□□□ -2.67
Cdc40Q9DC48 Snord123-201ENSMUST00000158692 71 ntBASIC-1.62□□□□□ -2.67
Cdc40Q9DC48 Gm22286-201ENSMUST00000179708 107 ntBASIC-1.62□□□□□ -2.67
Cdc40Q9DC48 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.63□□□□□ -2.67
Cdc40Q9DC48 Gm23468-201ENSMUST00000157125 108 ntBASIC-1.64□□□□□ -2.67
Cdc40Q9DC48 Gm22004-201ENSMUST00000101884 107 ntBASIC-1.65□□□□□ -2.67
Cdc40Q9DC48 Mir876-201ENSMUST00000104659 81 ntBASIC-1.65□□□□□ -2.67
Cdc40Q9DC48 Gm24051-201ENSMUST00000158622 75 ntBASIC-1.65□□□□□ -2.67
Cdc40Q9DC48 Gm24676-201ENSMUST00000158758 75 ntBASIC-1.65□□□□□ -2.67
Cdc40Q9DC48 Gm24612-201ENSMUST00000083267 107 ntBASIC-1.65□□□□□ -2.67
Cdc40Q9DC48 Snord57-201ENSMUST00000083338 72 ntBASIC-1.65□□□□□ -2.67
Cdc40Q9DC48 Mir7086-201ENSMUST00000183683 65 ntBASIC-1.66□□□□□ -2.68
Cdc40Q9DC48 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.67□□□□□ -2.68
Cdc40Q9DC48 Gm23306-201ENSMUST00000179058 105 ntBASIC-1.67□□□□□ -2.68
Cdc40Q9DC48 Gm22446-201ENSMUST00000180108 104 ntBASIC-1.68□□□□□ -2.68
Cdc40Q9DC48 Gm24650-201ENSMUST00000157105 103 ntBASIC-1.69□□□□□ -2.68
Cdc40Q9DC48 Gm25429-201ENSMUST00000157607 132 ntBASIC-1.69□□□□□ -2.68
Cdc40Q9DC48 Gm26491-201ENSMUST00000179268 121 ntBASIC-1.69□□□□□ -2.68
Cdc40Q9DC48 Gm26454-201ENSMUST00000082682 107 ntBASIC-1.69□□□□□ -2.68
Cdc40Q9DC48 Gm23578-201ENSMUST00000103943 104 ntBASIC-1.7□□□□□ -2.68
Cdc40Q9DC48 Gm25542-201ENSMUST00000116889 94 ntBASIC-1.7□□□□□ -2.68
Cdc40Q9DC48 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.7□□□□□ -2.68
Cdc40Q9DC48 Mir7231-201ENSMUST00000196252 61 ntBASIC-1.7□□□□□ -2.68
Cdc40Q9DC48 AL929417.1-201ENSMUST00000214901 124 ntBASIC-1.7□□□□□ -2.68
Cdc40Q9DC48 AC122335.1-201ENSMUST00000217587 175 ntBASIC-1.7□□□□□ -2.68
Cdc40Q9DC48 Gm25862-201ENSMUST00000158250 129 ntBASIC-1.71□□□□□ -2.68
Cdc40Q9DC48 Gm22458-201ENSMUST00000082576 107 ntBASIC-1.71□□□□□ -2.68
Cdc40Q9DC48 Gm25812-201ENSMUST00000082751 103 ntBASIC-1.71□□□□□ -2.68
Cdc40Q9DC48 Mir15b-201ENSMUST00000083646 64 ntBASIC-1.71□□□□□ -2.68
Cdc40Q9DC48 Gm23350-201ENSMUST00000158429 103 ntBASIC-1.72□□□□□ -2.68
Cdc40Q9DC48 Mir3083-201ENSMUST00000175377 64 ntBASIC-1.72□□□□□ -2.68
Cdc40Q9DC48 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-1.72□□□□□ -2.68
Cdc40Q9DC48 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.73□□□□□ -2.69
Cdc40Q9DC48 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-1.73□□□□□ -2.69
Cdc40Q9DC48 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.74□□□□□ -2.69
Cdc40Q9DC48 CT030170.1-201ENSMUST00000222183 148 ntBASIC-1.74□□□□□ -2.69
Cdc40Q9DC48 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-1.74□□□□□ -2.69
Cdc40Q9DC48 Gm25289-201ENSMUST00000122799 119 ntBASIC-1.75□□□□□ -2.69
Cdc40Q9DC48 Gm24492-201ENSMUST00000083798 107 ntBASIC-1.75□□□□□ -2.69
Cdc40Q9DC48 Gm25740-201ENSMUST00000180247 107 ntBASIC-1.76□□□□□ -2.69
Cdc40Q9DC48 Gm25854-201ENSMUST00000082792 72 ntBASIC-1.76□□□□□ -2.69
Cdc40Q9DC48 Gm25644-201ENSMUST00000083209 107 ntBASIC-1.76□□□□□ -2.69
Cdc40Q9DC48 Mir494-201ENSMUST00000093632 85 ntBASIC-1.76□□□□□ -2.69
Cdc40Q9DC48 Gm24167-201ENSMUST00000177733 124 ntBASIC-1.77□□□□□ -2.69
Cdc40Q9DC48 Gm24028-201ENSMUST00000178991 124 ntBASIC-1.77□□□□□ -2.69
Cdc40Q9DC48 Gm24705-201ENSMUST00000082808 107 ntBASIC-1.77□□□□□ -2.69
Cdc40Q9DC48 Gm11333-201ENSMUST00000119479 148 ntBASIC-1.78□□□□□ -2.69
Cdc40Q9DC48 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.78□□□□□ -2.69
Cdc40Q9DC48 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.78□□□□□ -2.69
Cdc40Q9DC48 Gm23244-201ENSMUST00000083375 92 ntBASIC-1.78□□□□□ -2.69
Cdc40Q9DC48 Mir297a-2-201ENSMUST00000103795 90 ntBASIC-1.79□□□□□ -2.7
Cdc40Q9DC48 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.79□□□□□ -2.7
Cdc40Q9DC48 Gm23966-201ENSMUST00000179823 107 ntBASIC-1.79□□□□□ -2.7
Cdc40Q9DC48 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.81□□□□□ -2.7
Cdc40Q9DC48 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.81□□□□□ -2.7
Cdc40Q9DC48 Gm24725-201ENSMUST00000158229 125 ntBASIC-1.82□□□□□ -2.7
Cdc40Q9DC48 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.82□□□□□ -2.7
Cdc40Q9DC48 Gm24988-201ENSMUST00000104460 121 ntBASIC-1.83□□□□□ -2.7
Cdc40Q9DC48 Gm2077-201ENSMUST00000195017 319 ntBASIC-1.83□□□□□ -2.7
Cdc40Q9DC48 Gm25061-201ENSMUST00000104665 107 ntBASIC-1.84□□□□□ -2.7
Cdc40Q9DC48 Gm26104-201ENSMUST00000157250 108 ntBASIC-1.85□□□□□ -2.71
Cdc40Q9DC48 Gm23477-201ENSMUST00000158882 128 ntBASIC-1.85□□□□□ -2.71
Cdc40Q9DC48 AC122210.2-201ENSMUST00000220216 115 ntBASIC-1.85□□□□□ -2.71
Cdc40Q9DC48 AC160962.3-201ENSMUST00000225914 112 ntBASIC-1.85□□□□□ -2.71
Cdc40Q9DC48 Gm26375-201ENSMUST00000101829 106 ntBASIC-1.86□□□□□ -2.71
Cdc40Q9DC48 Gm26125-201ENSMUST00000083357 107 ntBASIC-1.86□□□□□ -2.71
Cdc40Q9DC48 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-1.87□□□□□ -2.71
Cdc40Q9DC48 Gm22717-201ENSMUST00000122703 171 ntBASIC-1.87□□□□□ -2.71
Cdc40Q9DC48 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.88□□□□□ -2.71
Cdc40Q9DC48 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.88□□□□□ -2.71
Cdc40Q9DC48 Gm20734-201ENSMUST00000216939 193 ntBASIC-1.88□□□□□ -2.71
Cdc40Q9DC48 AC161271.1-201ENSMUST00000226914 150 ntBASIC-1.88□□□□□ -2.71
Cdc40Q9DC48 Gm23570-201ENSMUST00000083029 104 ntBASIC-1.88□□□□□ -2.71
Cdc40Q9DC48 Mir297-1-201ENSMUST00000103800 76 ntBASIC-1.89□□□□□ -2.71
Cdc40Q9DC48 Gm22354-201ENSMUST00000083919 70 ntBASIC-1.89□□□□□ -2.71
Cdc40Q9DC48 Gm25087-201ENSMUST00000101992 78 ntBASIC-1.9□□□□□ -2.71
Cdc40Q9DC48 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.9□□□□□ -2.71
Cdc40Q9DC48 Mir367-201ENSMUST00000083479 75 ntBASIC-1.9□□□□□ -2.71
Cdc40Q9DC48 Gm26467-201ENSMUST00000097257 78 ntBASIC-1.9□□□□□ -2.71
Cdc40Q9DC48 Gm24234-201ENSMUST00000104316 107 ntBASIC-1.91□□□□□ -2.72
Cdc40Q9DC48 Gm25380-201ENSMUST00000175463 107 ntBASIC-1.91□□□□□ -2.72
Cdc40Q9DC48 Gm24641-201ENSMUST00000178055 107 ntBASIC-1.91□□□□□ -2.72
Cdc40Q9DC48 Gm25484-201ENSMUST00000178217 107 ntBASIC-1.91□□□□□ -2.72
Cdc40Q9DC48 Gm26138-201ENSMUST00000179236 107 ntBASIC-1.91□□□□□ -2.72
Cdc40Q9DC48 Gm22821-201ENSMUST00000179288 107 ntBASIC-1.91□□□□□ -2.72
Cdc40Q9DC48 Gm23298-201ENSMUST00000083181 107 ntBASIC-1.91□□□□□ -2.72
Cdc40Q9DC48 Gm22057-201ENSMUST00000083387 107 ntBASIC-1.91□□□□□ -2.72
Cdc40Q9DC48 Gm25516-201ENSMUST00000083857 107 ntBASIC-1.91□□□□□ -2.72
Cdc40Q9DC48 Gm23644-201ENSMUST00000157856 77 ntBASIC-1.93□□□□□ -2.72
Cdc40Q9DC48 Mir3064-201ENSMUST00000175532 67 ntBASIC-1.93□□□□□ -2.72
Cdc40Q9DC48 Gm37646-201ENSMUST00000191756 111 ntBASIC-1.94□□□□□ -2.72
Cdc40Q9DC48 Gm23678-201ENSMUST00000083157 107 ntBASIC-1.94□□□□□ -2.72
Cdc40Q9DC48 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.95□□□□□ -2.72
Cdc40Q9DC48 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC-1.95□□□□□ -2.72
Cdc40Q9DC48 Gm22842-201ENSMUST00000157709 118 ntBASIC-1.96□□□□□ -2.72
Cdc40Q9DC48 Gm24605-201ENSMUST00000104772 96 ntBASIC-1.97□□□□□ -2.72
Cdc40Q9DC48 Gm24673-201ENSMUST00000116948 124 ntBASIC-1.97□□□□□ -2.72
Cdc40Q9DC48 Gm23108-201ENSMUST00000178295 124 ntBASIC-1.97□□□□□ -2.72
Cdc40Q9DC48 Gm22213-201ENSMUST00000157564 119 ntBASIC-1.98□□□□□ -2.73
Cdc40Q9DC48 Gm22464-201ENSMUST00000175273 64 ntBASIC-1.98□□□□□ -2.73
Retrieved 100 of 76,532 protein–RNA pairs in 159.5 ms