Protein–RNA interactions for Protein: Q9CWX4

Rpusd4, Mitochondrial RNA pseudouridine synthase Rpusd4, mousemouse

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd4Q9CWX4 Snord8-201ENSMUST00000175303 110 ntBASIC-1.02□□□□□ -2.57
Rpusd4Q9CWX4 Gm24650-201ENSMUST00000157105 103 ntBASIC-1.03□□□□□ -2.57
Rpusd4Q9CWX4 Gm25964-201ENSMUST00000157171 97 ntBASIC-1.03□□□□□ -2.57
Rpusd4Q9CWX4 Gm22013-201ENSMUST00000158788 103 ntBASIC-1.03□□□□□ -2.57
Rpusd4Q9CWX4 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-1.03□□□□□ -2.57
Rpusd4Q9CWX4 Mir1839-201ENSMUST00000175366 127 ntBASIC-1.03□□□□□ -2.57
Rpusd4Q9CWX4 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-1.03□□□□□ -2.57
Rpusd4Q9CWX4 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.03□□□□□ -2.57
Rpusd4Q9CWX4 Gm23909-201ENSMUST00000104598 131 ntBASIC-1.04□□□□□ -2.58
Rpusd4Q9CWX4 Gm27798-201ENSMUST00000184989 71 ntBASIC-1.04□□□□□ -2.58
Rpusd4Q9CWX4 Gm24586-201ENSMUST00000116695 89 ntBASIC-1.05□□□□□ -2.58
Rpusd4Q9CWX4 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.05□□□□□ -2.58
Rpusd4Q9CWX4 Gm25158-201ENSMUST00000177681 121 ntBASIC-1.05□□□□□ -2.58
Rpusd4Q9CWX4 Gm26229-201ENSMUST00000179699 121 ntBASIC-1.05□□□□□ -2.58
Rpusd4Q9CWX4 Gm25987-201ENSMUST00000083234 107 ntBASIC-1.05□□□□□ -2.58
Rpusd4Q9CWX4 Mir543-201ENSMUST00000102286 76 ntBASIC-1.07□□□□□ -2.58
Rpusd4Q9CWX4 Gm24003-201ENSMUST00000158455 100 ntBASIC-1.07□□□□□ -2.58
Rpusd4Q9CWX4 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.07□□□□□ -2.58
Rpusd4Q9CWX4 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-1.07□□□□□ -2.58
Rpusd4Q9CWX4 Gm23468-201ENSMUST00000157125 108 ntBASIC-1.09□□□□□ -2.58
Rpusd4Q9CWX4 Gm23173-201ENSMUST00000157161 160 ntBASIC-1.09□□□□□ -2.58
Rpusd4Q9CWX4 Gm27415-201ENSMUST00000183720 95 ntBASIC-1.09□□□□□ -2.58
Rpusd4Q9CWX4 Gm25429-201ENSMUST00000157607 132 ntBASIC-1.1□□□□□ -2.59
Rpusd4Q9CWX4 Gm25644-201ENSMUST00000083209 107 ntBASIC-1.1□□□□□ -2.59
Rpusd4Q9CWX4 Mir1948-201ENSMUST00000157325 85 ntBASIC-1.11□□□□□ -2.59
Rpusd4Q9CWX4 Gm22539-201ENSMUST00000158167 117 ntBASIC-1.11□□□□□ -2.59
Rpusd4Q9CWX4 Gm23812-201ENSMUST00000175156 84 ntBASIC-1.11□□□□□ -2.59
Rpusd4Q9CWX4 Gm23374-201ENSMUST00000175408 84 ntBASIC-1.11□□□□□ -2.59
Rpusd4Q9CWX4 Gm26499-201ENSMUST00000178544 79 ntBASIC-1.11□□□□□ -2.59
Rpusd4Q9CWX4 Gm26096-201ENSMUST00000179084 79 ntBASIC-1.11□□□□□ -2.59
Rpusd4Q9CWX4 Snord57-201ENSMUST00000083338 72 ntBASIC-1.11□□□□□ -2.59
Rpusd4Q9CWX4 Mir466f-1-201ENSMUST00000104779 94 ntBASIC-1.12□□□□□ -2.59
Rpusd4Q9CWX4 Gm25862-201ENSMUST00000158250 129 ntBASIC-1.12□□□□□ -2.59
Rpusd4Q9CWX4 Gm22458-201ENSMUST00000082576 107 ntBASIC-1.13□□□□□ -2.59
Rpusd4Q9CWX4 Gm22595-201ENSMUST00000104250 130 ntBASIC-1.14□□□□□ -2.59
Rpusd4Q9CWX4 Mir876-201ENSMUST00000104659 81 ntBASIC-1.14□□□□□ -2.59
Rpusd4Q9CWX4 AC158537.2-201ENSMUST00000223575 150 ntBASIC-1.14□□□□□ -2.59
Rpusd4Q9CWX4 n-R5s153-201ENSMUST00000083451 116 ntBASIC-1.14□□□□□ -2.59
Rpusd4Q9CWX4 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-1.15□□□□□ -2.59
Rpusd4Q9CWX4 Gm24410-201ENSMUST00000083433 107 ntBASIC-1.15□□□□□ -2.59
Rpusd4Q9CWX4 Gm25542-201ENSMUST00000116889 94 ntBASIC-1.16□□□□□ -2.6
Rpusd4Q9CWX4 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.16□□□□□ -2.6
Rpusd4Q9CWX4 Gm22354-201ENSMUST00000083919 70 ntBASIC-1.16□□□□□ -2.6
Rpusd4Q9CWX4 Gm25854-201ENSMUST00000082792 72 ntBASIC-1.17□□□□□ -2.6
Rpusd4Q9CWX4 Gm22729-201ENSMUST00000158088 129 ntBASIC-1.18□□□□□ -2.6
Rpusd4Q9CWX4 Gm25248-201ENSMUST00000175473 98 ntBASIC-1.18□□□□□ -2.6
Rpusd4Q9CWX4 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.19□□□□□ -2.6
Rpusd4Q9CWX4 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.19□□□□□ -2.6
Rpusd4Q9CWX4 AC122335.1-201ENSMUST00000217587 175 ntBASIC-1.19□□□□□ -2.6
Rpusd4Q9CWX4 Mir494-201ENSMUST00000093632 85 ntBASIC-1.19□□□□□ -2.6
Rpusd4Q9CWX4 Gm24400-201ENSMUST00000157865 107 ntBASIC-1.2□□□□□ -2.6
Rpusd4Q9CWX4 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-1.2□□□□□ -2.6
Rpusd4Q9CWX4 Gm25417-201ENSMUST00000104212 131 ntBASIC-1.21□□□□□ -2.6
Rpusd4Q9CWX4 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-1.21□□□□□ -2.6
Rpusd4Q9CWX4 AC161271.1-201ENSMUST00000226914 150 ntBASIC-1.21□□□□□ -2.6
Rpusd4Q9CWX4 Gm25112-201ENSMUST00000122680 104 ntBASIC-1.22□□□□□ -2.6
Rpusd4Q9CWX4 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.23□□□□□ -2.61
Rpusd4Q9CWX4 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.23□□□□□ -2.61
Rpusd4Q9CWX4 Gm25061-201ENSMUST00000104665 107 ntBASIC-1.24□□□□□ -2.61
Rpusd4Q9CWX4 Gm26104-201ENSMUST00000157250 108 ntBASIC-1.24□□□□□ -2.61
Rpusd4Q9CWX4 Gm24612-201ENSMUST00000083267 107 ntBASIC-1.24□□□□□ -2.61
Rpusd4Q9CWX4 Mir450b-201ENSMUST00000102095 82 ntBASIC-1.25□□□□□ -2.61
Rpusd4Q9CWX4 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.25□□□□□ -2.61
Rpusd4Q9CWX4 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.26□□□□□ -2.61
Rpusd4Q9CWX4 Gm23306-201ENSMUST00000179058 105 ntBASIC-1.26□□□□□ -2.61
Rpusd4Q9CWX4 Gm24459-201ENSMUST00000082730 86 ntBASIC-1.26□□□□□ -2.61
Rpusd4Q9CWX4 Gm24988-201ENSMUST00000104460 121 ntBASIC-1.27□□□□□ -2.61
Rpusd4Q9CWX4 Gm23590-201ENSMUST00000157661 104 ntBASIC-1.27□□□□□ -2.61
Rpusd4Q9CWX4 Gm24946-201ENSMUST00000158332 106 ntBASIC-1.27□□□□□ -2.61
Rpusd4Q9CWX4 Mir7086-201ENSMUST00000183683 65 ntBASIC-1.28□□□□□ -2.61
Rpusd4Q9CWX4 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.28□□□□□ -2.61
Rpusd4Q9CWX4 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.28□□□□□ -2.61
Rpusd4Q9CWX4 Mir7231-201ENSMUST00000196252 61 ntBASIC-1.28□□□□□ -2.61
Rpusd4Q9CWX4 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.29□□□□□ -2.62
Rpusd4Q9CWX4 Gm22845-201ENSMUST00000157712 104 ntBASIC-1.3□□□□□ -2.62
Rpusd4Q9CWX4 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-1.3□□□□□ -2.62
Rpusd4Q9CWX4 Gm24091-201ENSMUST00000082550 83 ntBASIC-1.3□□□□□ -2.62
Rpusd4Q9CWX4 Gm23711-201ENSMUST00000083856 83 ntBASIC-1.3□□□□□ -2.62
Rpusd4Q9CWX4 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.31□□□□□ -2.62
Rpusd4Q9CWX4 Gm22016-201ENSMUST00000158793 114 ntBASIC-1.31□□□□□ -2.62
Rpusd4Q9CWX4 Gm25740-201ENSMUST00000180247 107 ntBASIC-1.31□□□□□ -2.62
Rpusd4Q9CWX4 Gm22805-201ENSMUST00000082739 107 ntBASIC-1.31□□□□□ -2.62
Rpusd4Q9CWX4 Mir122-201ENSMUST00000083468 66 ntBASIC-1.31□□□□□ -2.62
Rpusd4Q9CWX4 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-1.32□□□□□ -2.62
Rpusd4Q9CWX4 Gm22454-201ENSMUST00000082583 107 ntBASIC-1.32□□□□□ -2.62
Rpusd4Q9CWX4 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.33□□□□□ -2.62
Rpusd4Q9CWX4 Gm22251-201ENSMUST00000083216 107 ntBASIC-1.33□□□□□ -2.62
Rpusd4Q9CWX4 Gm25087-201ENSMUST00000101992 78 ntBASIC-1.34□□□□□ -2.62
Rpusd4Q9CWX4 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-1.34□□□□□ -2.62
Rpusd4Q9CWX4 Mir466m-201ENSMUST00000175052 84 ntBASIC-1.34□□□□□ -2.62
Rpusd4Q9CWX4 CT030170.1-201ENSMUST00000222183 148 ntBASIC-1.34□□□□□ -2.62
Rpusd4Q9CWX4 Gm26467-201ENSMUST00000097257 78 ntBASIC-1.34□□□□□ -2.62
Rpusd4Q9CWX4 Gm25995-201ENSMUST00000175396 142 ntBASIC-1.37□□□□□ -2.63
Rpusd4Q9CWX4 Gm26125-201ENSMUST00000083357 107 ntBASIC-1.37□□□□□ -2.63
Rpusd4Q9CWX4 Gm25652-201ENSMUST00000083780 103 ntBASIC-1.37□□□□□ -2.63
Rpusd4Q9CWX4 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC-1.37□□□□□ -2.63
Rpusd4Q9CWX4 Gm11333-201ENSMUST00000119479 148 ntBASIC-1.38□□□□□ -2.63
Rpusd4Q9CWX4 Gm22464-201ENSMUST00000175273 64 ntBASIC-1.38□□□□□ -2.63
Rpusd4Q9CWX4 Gm23477-201ENSMUST00000158882 128 ntBASIC-1.39□□□□□ -2.63
Rpusd4Q9CWX4 Gm24197-201ENSMUST00000175085 109 ntBASIC-1.39□□□□□ -2.63
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms