Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm24988-201ENSMUST00000104460 121 ntBASIC-1.03□□□□□ -2.57
Ddx28Q9CWT6 Mir466f-1-201ENSMUST00000104779 94 ntBASIC-1.03□□□□□ -2.57
Ddx28Q9CWT6 Gm11333-201ENSMUST00000119479 148 ntBASIC-1.03□□□□□ -2.57
Ddx28Q9CWT6 Gm23904-201ENSMUST00000157567 124 ntBASIC-1.03□□□□□ -2.57
Ddx28Q9CWT6 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-1.03□□□□□ -2.57
Ddx28Q9CWT6 Gm22429-201ENSMUST00000158553 130 ntBASIC-1.04□□□□□ -2.58
Ddx28Q9CWT6 Gm25248-201ENSMUST00000175473 98 ntBASIC-1.04□□□□□ -2.58
Ddx28Q9CWT6 Gm44481-201ENSMUST00000197288 84 ntBASIC-1.04□□□□□ -2.58
Ddx28Q9CWT6 Gm44339-201ENSMUST00000200598 84 ntBASIC-1.04□□□□□ -2.58
Ddx28Q9CWT6 Gm22305-201ENSMUST00000082690 108 ntBASIC-1.04□□□□□ -2.58
Ddx28Q9CWT6 Gm23173-201ENSMUST00000157161 160 ntBASIC-1.05□□□□□ -2.58
Ddx28Q9CWT6 Mir1948-201ENSMUST00000157325 85 ntBASIC-1.05□□□□□ -2.58
Ddx28Q9CWT6 Gm27987-201ENSMUST00000184023 93 ntBASIC-1.05□□□□□ -2.58
Ddx28Q9CWT6 CT571266.1-201ENSMUST00000222859 153 ntBASIC-1.06□□□□□ -2.58
Ddx28Q9CWT6 Gm23570-201ENSMUST00000083029 104 ntBASIC-1.06□□□□□ -2.58
Ddx28Q9CWT6 Gm23607-201ENSMUST00000104550 126 ntBASIC-1.07□□□□□ -2.58
Ddx28Q9CWT6 Mir702-201ENSMUST00000102285 109 ntBASIC-1.08□□□□□ -2.58
Ddx28Q9CWT6 Gm23072-201ENSMUST00000158243 123 ntBASIC-1.08□□□□□ -2.58
Ddx28Q9CWT6 Mir7057-201ENSMUST00000184685 58 ntBASIC-1.08□□□□□ -2.58
Ddx28Q9CWT6 Mir15b-201ENSMUST00000083646 64 ntBASIC-1.08□□□□□ -2.58
Ddx28Q9CWT6 Gm25712-201ENSMUST00000158634 93 ntBASIC-1.09□□□□□ -2.58
Ddx28Q9CWT6 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-1.09□□□□□ -2.58
Ddx28Q9CWT6 Gm25225-201ENSMUST00000158197 102 ntBASIC-1.1□□□□□ -2.59
Ddx28Q9CWT6 Gm24701-201ENSMUST00000101946 105 ntBASIC-1.11□□□□□ -2.59
Ddx28Q9CWT6 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-1.12□□□□□ -2.59
Ddx28Q9CWT6 Gm23652-201ENSMUST00000116752 107 ntBASIC-1.12□□□□□ -2.59
Ddx28Q9CWT6 Gm26491-201ENSMUST00000179268 121 ntBASIC-1.12□□□□□ -2.59
Ddx28Q9CWT6 Mir6957-201ENSMUST00000183708 64 ntBASIC-1.12□□□□□ -2.59
Ddx28Q9CWT6 Gm27798-201ENSMUST00000184989 71 ntBASIC-1.12□□□□□ -2.59
Ddx28Q9CWT6 Gm23038-201ENSMUST00000083873 104 ntBASIC-1.12□□□□□ -2.59
Ddx28Q9CWT6 Gm23199-201ENSMUST00000158812 107 ntBASIC-1.13□□□□□ -2.59
Ddx28Q9CWT6 Gm23308-201ENSMUST00000179475 107 ntBASIC-1.13□□□□□ -2.59
Ddx28Q9CWT6 Gm23166-201ENSMUST00000157164 101 ntBASIC-1.14□□□□□ -2.59
Ddx28Q9CWT6 Gm44589-201ENSMUST00000207025 115 ntBASIC-1.14□□□□□ -2.59
Ddx28Q9CWT6 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-1.14□□□□□ -2.59
Ddx28Q9CWT6 Snord57-201ENSMUST00000083338 72 ntBASIC-1.14□□□□□ -2.59
Ddx28Q9CWT6 Gm24674-201ENSMUST00000179194 104 ntBASIC-1.15□□□□□ -2.59
Ddx28Q9CWT6 AC122335.1-201ENSMUST00000217587 175 ntBASIC-1.15□□□□□ -2.59
Ddx28Q9CWT6 Snord16a-201ENSMUST00000083895 99 ntBASIC-1.15□□□□□ -2.59
Ddx28Q9CWT6 Mir1950-201ENSMUST00000158526 74 ntBASIC-1.17□□□□□ -2.6
Ddx28Q9CWT6 CT030170.1-201ENSMUST00000222183 148 ntBASIC-1.17□□□□□ -2.6
Ddx28Q9CWT6 Gm22950-201ENSMUST00000082776 107 ntBASIC-1.17□□□□□ -2.6
Ddx28Q9CWT6 Gm25022-201ENSMUST00000102205 83 ntBASIC-1.18□□□□□ -2.6
Ddx28Q9CWT6 Mir1839-201ENSMUST00000175366 127 ntBASIC-1.18□□□□□ -2.6
Ddx28Q9CWT6 Mir467a-6-201ENSMUST00000177790 83 ntBASIC-1.18□□□□□ -2.6
Ddx28Q9CWT6 Mir467a-3-201ENSMUST00000178082 83 ntBASIC-1.18□□□□□ -2.6
Ddx28Q9CWT6 Snord50a-201ENSMUST00000178154 72 ntBASIC-1.18□□□□□ -2.6
Ddx28Q9CWT6 Gm24463-201ENSMUST00000178417 72 ntBASIC-1.18□□□□□ -2.6
Ddx28Q9CWT6 Mir467a-7-201ENSMUST00000178635 83 ntBASIC-1.18□□□□□ -2.6
Ddx28Q9CWT6 Mir467a-10-201ENSMUST00000179320 83 ntBASIC-1.18□□□□□ -2.6
Ddx28Q9CWT6 Mir467a-5-201ENSMUST00000179352 83 ntBASIC-1.18□□□□□ -2.6
Ddx28Q9CWT6 Mir467a-2-201ENSMUST00000179447 83 ntBASIC-1.18□□□□□ -2.6
Ddx28Q9CWT6 Mir467a-9-201ENSMUST00000179752 83 ntBASIC-1.18□□□□□ -2.6
Ddx28Q9CWT6 Mir467a-4-201ENSMUST00000179923 83 ntBASIC-1.18□□□□□ -2.6
Ddx28Q9CWT6 Mir467a-8-201ENSMUST00000180070 83 ntBASIC-1.18□□□□□ -2.6
Ddx28Q9CWT6 Gm24091-201ENSMUST00000082550 83 ntBASIC-1.18□□□□□ -2.6
Ddx28Q9CWT6 Gm23711-201ENSMUST00000083856 83 ntBASIC-1.18□□□□□ -2.6
Ddx28Q9CWT6 Mir3064-201ENSMUST00000175532 67 ntBASIC-1.19□□□□□ -2.6
Ddx28Q9CWT6 Gm23216-201ENSMUST00000179545 107 ntBASIC-1.19□□□□□ -2.6
Ddx28Q9CWT6 Gm26104-201ENSMUST00000157250 108 ntBASIC-1.2□□□□□ -2.6
Ddx28Q9CWT6 Gm23630-201ENSMUST00000175292 104 ntBASIC-1.2□□□□□ -2.6
Ddx28Q9CWT6 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-1.2□□□□□ -2.6
Ddx28Q9CWT6 Mir7231-201ENSMUST00000196252 61 ntBASIC-1.2□□□□□ -2.6
Ddx28Q9CWT6 AC154832.1-201ENSMUST00000228928 141 ntBASIC-1.2□□□□□ -2.6
Ddx28Q9CWT6 Gm23240-201ENSMUST00000083009 121 ntBASIC-1.2□□□□□ -2.6
Ddx28Q9CWT6 Mir297-1-201ENSMUST00000103800 76 ntBASIC-1.21□□□□□ -2.6
Ddx28Q9CWT6 Gm22013-201ENSMUST00000158788 103 ntBASIC-1.22□□□□□ -2.6
Ddx28Q9CWT6 Gm23477-201ENSMUST00000158882 128 ntBASIC-1.22□□□□□ -2.6
Ddx28Q9CWT6 Mir297b-201ENSMUST00000102268 109 ntBASIC-1.23□□□□□ -2.61
Ddx28Q9CWT6 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC-1.24□□□□□ -2.61
Ddx28Q9CWT6 Gm44932-201ENSMUST00000206799 121 ntBASIC-1.24□□□□□ -2.61
Ddx28Q9CWT6 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC-1.24□□□□□ -2.61
Ddx28Q9CWT6 Gm23909-201ENSMUST00000104598 131 ntBASIC-1.25□□□□□ -2.61
Ddx28Q9CWT6 Mir466m-201ENSMUST00000175052 84 ntBASIC-1.25□□□□□ -2.61
Ddx28Q9CWT6 Gm23812-201ENSMUST00000175156 84 ntBASIC-1.25□□□□□ -2.61
Ddx28Q9CWT6 Gm23374-201ENSMUST00000175408 84 ntBASIC-1.25□□□□□ -2.61
Ddx28Q9CWT6 Mir7055-201ENSMUST00000197423 59 ntBASIC-1.25□□□□□ -2.61
Ddx28Q9CWT6 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-1.25□□□□□ -2.61
Ddx28Q9CWT6 Gm25158-201ENSMUST00000177681 121 ntBASIC-1.26□□□□□ -2.61
Ddx28Q9CWT6 Gm24495-201ENSMUST00000178575 79 ntBASIC-1.26□□□□□ -2.61
Ddx28Q9CWT6 Gm26229-201ENSMUST00000179699 121 ntBASIC-1.26□□□□□ -2.61
Ddx28Q9CWT6 Gm22253-201ENSMUST00000179870 79 ntBASIC-1.26□□□□□ -2.61
Ddx28Q9CWT6 Gm26262-201ENSMUST00000158024 127 ntBASIC-1.27□□□□□ -2.61
Ddx28Q9CWT6 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-1.28□□□□□ -2.61
Ddx28Q9CWT6 Gm23376-201ENSMUST00000082938 160 ntBASIC-1.28□□□□□ -2.61
Ddx28Q9CWT6 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-1.28□□□□□ -2.61
Ddx28Q9CWT6 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-1.28□□□□□ -2.61
Ddx28Q9CWT6 Gm22717-201ENSMUST00000122703 171 ntBASIC-1.29□□□□□ -2.62
Ddx28Q9CWT6 Mir6964-201ENSMUST00000200252 59 ntBASIC-1.29□□□□□ -2.62
Ddx28Q9CWT6 Gm23613-201ENSMUST00000082596 87 ntBASIC-1.29□□□□□ -2.62
Ddx28Q9CWT6 Mir1187-201ENSMUST00000116936 122 ntBASIC-1.3□□□□□ -2.62
Ddx28Q9CWT6 Gm43943-201ENSMUST00000204201 113 ntBASIC-1.3□□□□□ -2.62
Ddx28Q9CWT6 Gm29344-201ENSMUST00000068143 210 ntBASIC-1.3□□□□□ -2.62
Ddx28Q9CWT6 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-1.3□□□□□ -2.62
Ddx28Q9CWT6 Gm24003-201ENSMUST00000158455 100 ntBASIC-1.31□□□□□ -2.62
Ddx28Q9CWT6 Gm43206-201ENSMUST00000197990 114 ntBASIC-1.31□□□□□ -2.62
Ddx28Q9CWT6 Gm25681-201ENSMUST00000083938 106 ntBASIC-1.32□□□□□ -2.62
Ddx28Q9CWT6 Mir494-201ENSMUST00000093632 85 ntBASIC-1.32□□□□□ -2.62
Ddx28Q9CWT6 Gm24197-201ENSMUST00000175085 109 ntBASIC-1.33□□□□□ -2.62
Ddx28Q9CWT6 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.33□□□□□ -2.62
Retrieved 100 of 76,532 protein–RNA pairs in 140.3 ms