Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm24988-201ENSMUST00000104460 121 ntBASIC-1.03□□□□□ -2.57
Ddx28Q9CWT6 Mir466f-1-201ENSMUST00000104779 94 ntBASIC-1.03□□□□□ -2.57
Ddx28Q9CWT6 Gm11333-201ENSMUST00000119479 148 ntBASIC-1.03□□□□□ -2.57
Ddx28Q9CWT6 Gm23904-201ENSMUST00000157567 124 ntBASIC-1.03□□□□□ -2.57
Ddx28Q9CWT6 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-1.03□□□□□ -2.57
Ddx28Q9CWT6 Gm22429-201ENSMUST00000158553 130 ntBASIC-1.04□□□□□ -2.58
Ddx28Q9CWT6 Gm25248-201ENSMUST00000175473 98 ntBASIC-1.04□□□□□ -2.58
Ddx28Q9CWT6 Gm44481-201ENSMUST00000197288 84 ntBASIC-1.04□□□□□ -2.58
Ddx28Q9CWT6 Gm44339-201ENSMUST00000200598 84 ntBASIC-1.04□□□□□ -2.58
Ddx28Q9CWT6 Gm22305-201ENSMUST00000082690 108 ntBASIC-1.04□□□□□ -2.58
Ddx28Q9CWT6 Gm23173-201ENSMUST00000157161 160 ntBASIC-1.05□□□□□ -2.58
Ddx28Q9CWT6 Mir1948-201ENSMUST00000157325 85 ntBASIC-1.05□□□□□ -2.58
Ddx28Q9CWT6 Gm27987-201ENSMUST00000184023 93 ntBASIC-1.05□□□□□ -2.58
Ddx28Q9CWT6 CT571266.1-201ENSMUST00000222859 153 ntBASIC-1.06□□□□□ -2.58
Ddx28Q9CWT6 Gm23570-201ENSMUST00000083029 104 ntBASIC-1.06□□□□□ -2.58
Ddx28Q9CWT6 Gm23607-201ENSMUST00000104550 126 ntBASIC-1.07□□□□□ -2.58
Ddx28Q9CWT6 Mir702-201ENSMUST00000102285 109 ntBASIC-1.08□□□□□ -2.58
Ddx28Q9CWT6 Gm23072-201ENSMUST00000158243 123 ntBASIC-1.08□□□□□ -2.58
Ddx28Q9CWT6 Mir7057-201ENSMUST00000184685 58 ntBASIC-1.08□□□□□ -2.58
Ddx28Q9CWT6 Mir15b-201ENSMUST00000083646 64 ntBASIC-1.08□□□□□ -2.58
Ddx28Q9CWT6 Gm25712-201ENSMUST00000158634 93 ntBASIC-1.09□□□□□ -2.58
Ddx28Q9CWT6 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-1.09□□□□□ -2.58
Ddx28Q9CWT6 Gm25225-201ENSMUST00000158197 102 ntBASIC-1.1□□□□□ -2.59
Ddx28Q9CWT6 Gm24701-201ENSMUST00000101946 105 ntBASIC-1.11□□□□□ -2.59
Ddx28Q9CWT6 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-1.12□□□□□ -2.59
Ddx28Q9CWT6 Gm23652-201ENSMUST00000116752 107 ntBASIC-1.12□□□□□ -2.59
Ddx28Q9CWT6 Gm26491-201ENSMUST00000179268 121 ntBASIC-1.12□□□□□ -2.59
Ddx28Q9CWT6 Mir6957-201ENSMUST00000183708 64 ntBASIC-1.12□□□□□ -2.59
Ddx28Q9CWT6 Gm27798-201ENSMUST00000184989 71 ntBASIC-1.12□□□□□ -2.59
Ddx28Q9CWT6 Gm23038-201ENSMUST00000083873 104 ntBASIC-1.12□□□□□ -2.59
Ddx28Q9CWT6 Gm23199-201ENSMUST00000158812 107 ntBASIC-1.13□□□□□ -2.59
Ddx28Q9CWT6 Gm23308-201ENSMUST00000179475 107 ntBASIC-1.13□□□□□ -2.59
Ddx28Q9CWT6 Gm23166-201ENSMUST00000157164 101 ntBASIC-1.14□□□□□ -2.59
Ddx28Q9CWT6 Gm44589-201ENSMUST00000207025 115 ntBASIC-1.14□□□□□ -2.59
Ddx28Q9CWT6 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-1.14□□□□□ -2.59
Ddx28Q9CWT6 Snord57-201ENSMUST00000083338 72 ntBASIC-1.14□□□□□ -2.59
Ddx28Q9CWT6 Gm24674-201ENSMUST00000179194 104 ntBASIC-1.15□□□□□ -2.59
Ddx28Q9CWT6 AC122335.1-201ENSMUST00000217587 175 ntBASIC-1.15□□□□□ -2.59
Ddx28Q9CWT6 Snord16a-201ENSMUST00000083895 99 ntBASIC-1.15□□□□□ -2.59
Ddx28Q9CWT6 Mir1950-201ENSMUST00000158526 74 ntBASIC-1.17□□□□□ -2.6
Ddx28Q9CWT6 CT030170.1-201ENSMUST00000222183 148 ntBASIC-1.17□□□□□ -2.6
Ddx28Q9CWT6 Gm22950-201ENSMUST00000082776 107 ntBASIC-1.17□□□□□ -2.6
Ddx28Q9CWT6 Gm25022-201ENSMUST00000102205 83 ntBASIC-1.18□□□□□ -2.6
Ddx28Q9CWT6 Mir1839-201ENSMUST00000175366 127 ntBASIC-1.18□□□□□ -2.6
Ddx28Q9CWT6 Mir467a-6-201ENSMUST00000177790 83 ntBASIC-1.18□□□□□ -2.6
Ddx28Q9CWT6 Mir467a-3-201ENSMUST00000178082 83 ntBASIC-1.18□□□□□ -2.6
Ddx28Q9CWT6 Snord50a-201ENSMUST00000178154 72 ntBASIC-1.18□□□□□ -2.6
Ddx28Q9CWT6 Gm24463-201ENSMUST00000178417 72 ntBASIC-1.18□□□□□ -2.6
Ddx28Q9CWT6 Mir467a-7-201ENSMUST00000178635 83 ntBASIC-1.18□□□□□ -2.6
Ddx28Q9CWT6 Mir467a-10-201ENSMUST00000179320 83 ntBASIC-1.18□□□□□ -2.6
Ddx28Q9CWT6 Mir467a-5-201ENSMUST00000179352 83 ntBASIC-1.18□□□□□ -2.6
Ddx28Q9CWT6 Mir467a-2-201ENSMUST00000179447 83 ntBASIC-1.18□□□□□ -2.6
Ddx28Q9CWT6 Mir467a-9-201ENSMUST00000179752 83 ntBASIC-1.18□□□□□ -2.6
Ddx28Q9CWT6 Mir467a-4-201ENSMUST00000179923 83 ntBASIC-1.18□□□□□ -2.6
Ddx28Q9CWT6 Mir467a-8-201ENSMUST00000180070 83 ntBASIC-1.18□□□□□ -2.6
Ddx28Q9CWT6 Gm24091-201ENSMUST00000082550 83 ntBASIC-1.18□□□□□ -2.6
Ddx28Q9CWT6 Gm23711-201ENSMUST00000083856 83 ntBASIC-1.18□□□□□ -2.6
Ddx28Q9CWT6 Mir3064-201ENSMUST00000175532 67 ntBASIC-1.19□□□□□ -2.6
Ddx28Q9CWT6 Gm23216-201ENSMUST00000179545 107 ntBASIC-1.19□□□□□ -2.6
Ddx28Q9CWT6 Gm26104-201ENSMUST00000157250 108 ntBASIC-1.2□□□□□ -2.6
Ddx28Q9CWT6 Gm23630-201ENSMUST00000175292 104 ntBASIC-1.2□□□□□ -2.6
Ddx28Q9CWT6 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-1.2□□□□□ -2.6
Ddx28Q9CWT6 Mir7231-201ENSMUST00000196252 61 ntBASIC-1.2□□□□□ -2.6
Ddx28Q9CWT6 AC154832.1-201ENSMUST00000228928 141 ntBASIC-1.2□□□□□ -2.6
Ddx28Q9CWT6 Gm23240-201ENSMUST00000083009 121 ntBASIC-1.2□□□□□ -2.6
Ddx28Q9CWT6 Mir297-1-201ENSMUST00000103800 76 ntBASIC-1.21□□□□□ -2.6
Ddx28Q9CWT6 Gm22013-201ENSMUST00000158788 103 ntBASIC-1.22□□□□□ -2.6
Ddx28Q9CWT6 Gm23477-201ENSMUST00000158882 128 ntBASIC-1.22□□□□□ -2.6
Ddx28Q9CWT6 Mir297b-201ENSMUST00000102268 109 ntBASIC-1.23□□□□□ -2.61
Ddx28Q9CWT6 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC-1.24□□□□□ -2.61
Ddx28Q9CWT6 Gm44932-201ENSMUST00000206799 121 ntBASIC-1.24□□□□□ -2.61
Ddx28Q9CWT6 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC-1.24□□□□□ -2.61
Ddx28Q9CWT6 Gm23909-201ENSMUST00000104598 131 ntBASIC-1.25□□□□□ -2.61
Ddx28Q9CWT6 Mir466m-201ENSMUST00000175052 84 ntBASIC-1.25□□□□□ -2.61
Ddx28Q9CWT6 Gm23812-201ENSMUST00000175156 84 ntBASIC-1.25□□□□□ -2.61
Ddx28Q9CWT6 Gm23374-201ENSMUST00000175408 84 ntBASIC-1.25□□□□□ -2.61
Ddx28Q9CWT6 Mir7055-201ENSMUST00000197423 59 ntBASIC-1.25□□□□□ -2.61
Ddx28Q9CWT6 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-1.25□□□□□ -2.61
Ddx28Q9CWT6 Gm25158-201ENSMUST00000177681 121 ntBASIC-1.26□□□□□ -2.61
Ddx28Q9CWT6 Gm24495-201ENSMUST00000178575 79 ntBASIC-1.26□□□□□ -2.61
Ddx28Q9CWT6 Gm26229-201ENSMUST00000179699 121 ntBASIC-1.26□□□□□ -2.61
Ddx28Q9CWT6 Gm22253-201ENSMUST00000179870 79 ntBASIC-1.26□□□□□ -2.61
Ddx28Q9CWT6 Gm26262-201ENSMUST00000158024 127 ntBASIC-1.27□□□□□ -2.61
Ddx28Q9CWT6 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-1.28□□□□□ -2.61
Ddx28Q9CWT6 Gm23376-201ENSMUST00000082938 160 ntBASIC-1.28□□□□□ -2.61
Ddx28Q9CWT6 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-1.28□□□□□ -2.61
Ddx28Q9CWT6 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-1.28□□□□□ -2.61
Ddx28Q9CWT6 Gm22717-201ENSMUST00000122703 171 ntBASIC-1.29□□□□□ -2.62
Ddx28Q9CWT6 Mir6964-201ENSMUST00000200252 59 ntBASIC-1.29□□□□□ -2.62
Ddx28Q9CWT6 Gm23613-201ENSMUST00000082596 87 ntBASIC-1.29□□□□□ -2.62
Ddx28Q9CWT6 Mir1187-201ENSMUST00000116936 122 ntBASIC-1.3□□□□□ -2.62
Ddx28Q9CWT6 Gm43943-201ENSMUST00000204201 113 ntBASIC-1.3□□□□□ -2.62
Ddx28Q9CWT6 Gm29344-201ENSMUST00000068143 210 ntBASIC-1.3□□□□□ -2.62
Ddx28Q9CWT6 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-1.3□□□□□ -2.62
Ddx28Q9CWT6 Gm24003-201ENSMUST00000158455 100 ntBASIC-1.31□□□□□ -2.62
Ddx28Q9CWT6 Gm43206-201ENSMUST00000197990 114 ntBASIC-1.31□□□□□ -2.62
Ddx28Q9CWT6 Gm25681-201ENSMUST00000083938 106 ntBASIC-1.32□□□□□ -2.62
Ddx28Q9CWT6 Mir494-201ENSMUST00000093632 85 ntBASIC-1.32□□□□□ -2.62
Ddx28Q9CWT6 Gm24197-201ENSMUST00000175085 109 ntBASIC-1.33□□□□□ -2.62
Ddx28Q9CWT6 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.33□□□□□ -2.62
Retrieved 100 of 76,532 protein–RNA pairs in 217 ms