Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-1.81□□□□□ -2.7
RTRAFQ9CQE8 Gm22004-201ENSMUST00000101884 107 ntBASIC-1.82□□□□□ -2.7
RTRAFQ9CQE8 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.82□□□□□ -2.7
RTRAFQ9CQE8 Gm23812-201ENSMUST00000175156 84 ntBASIC-1.82□□□□□ -2.7
RTRAFQ9CQE8 Gm23374-201ENSMUST00000175408 84 ntBASIC-1.82□□□□□ -2.7
RTRAFQ9CQE8 Gm24612-201ENSMUST00000083267 107 ntBASIC-1.82□□□□□ -2.7
RTRAFQ9CQE8 Snord57-201ENSMUST00000083338 72 ntBASIC-1.82□□□□□ -2.7
RTRAFQ9CQE8 CT030170.1-201ENSMUST00000222183 148 ntBASIC-1.83□□□□□ -2.7
RTRAFQ9CQE8 AC122335.1-201ENSMUST00000217587 175 ntBASIC-1.84□□□□□ -2.7
RTRAFQ9CQE8 CT030166.3-201ENSMUST00000223203 193 ntBASIC-1.84□□□□□ -2.7
RTRAFQ9CQE8 Mir876-201ENSMUST00000104659 81 ntBASIC-1.85□□□□□ -2.71
RTRAFQ9CQE8 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.85□□□□□ -2.71
RTRAFQ9CQE8 Gm25248-201ENSMUST00000175473 98 ntBASIC-1.85□□□□□ -2.71
RTRAFQ9CQE8 Mir15b-201ENSMUST00000083646 64 ntBASIC-1.85□□□□□ -2.71
RTRAFQ9CQE8 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.86□□□□□ -2.71
RTRAFQ9CQE8 Gm11333-201ENSMUST00000119479 148 ntBASIC-1.87□□□□□ -2.71
RTRAFQ9CQE8 Mir3083-201ENSMUST00000175377 64 ntBASIC-1.87□□□□□ -2.71
RTRAFQ9CQE8 Gm24492-201ENSMUST00000083798 107 ntBASIC-1.87□□□□□ -2.71
RTRAFQ9CQE8 Mir494-201ENSMUST00000093632 85 ntBASIC-1.87□□□□□ -2.71
RTRAFQ9CQE8 Gm23578-201ENSMUST00000103943 104 ntBASIC-1.88□□□□□ -2.71
RTRAFQ9CQE8 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.88□□□□□ -2.71
RTRAFQ9CQE8 Gm25854-201ENSMUST00000082792 72 ntBASIC-1.88□□□□□ -2.71
RTRAFQ9CQE8 Gm25644-201ENSMUST00000083209 107 ntBASIC-1.88□□□□□ -2.71
RTRAFQ9CQE8 Gm25289-201ENSMUST00000122799 119 ntBASIC-1.89□□□□□ -2.71
RTRAFQ9CQE8 Gm23966-201ENSMUST00000179823 107 ntBASIC-1.89□□□□□ -2.71
RTRAFQ9CQE8 Gm25740-201ENSMUST00000180247 107 ntBASIC-1.89□□□□□ -2.71
RTRAFQ9CQE8 Gm2077-201ENSMUST00000195017 319 ntBASIC-1.89□□□□□ -2.71
RTRAFQ9CQE8 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-1.89□□□□□ -2.71
RTRAFQ9CQE8 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-1.89□□□□□ -2.71
RTRAFQ9CQE8 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.9□□□□□ -2.71
RTRAFQ9CQE8 Gm26491-201ENSMUST00000179268 121 ntBASIC-1.9□□□□□ -2.71
RTRAFQ9CQE8 Gm24988-201ENSMUST00000104460 121 ntBASIC-1.91□□□□□ -2.72
RTRAFQ9CQE8 AC161271.1-201ENSMUST00000226914 150 ntBASIC-1.92□□□□□ -2.72
RTRAFQ9CQE8 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.93□□□□□ -2.72
RTRAFQ9CQE8 Gm23350-201ENSMUST00000158429 103 ntBASIC-1.94□□□□□ -2.72
RTRAFQ9CQE8 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-1.95□□□□□ -2.72
RTRAFQ9CQE8 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.95□□□□□ -2.72
RTRAFQ9CQE8 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.96□□□□□ -2.72
RTRAFQ9CQE8 AL929417.1-201ENSMUST00000214901 124 ntBASIC-1.96□□□□□ -2.72
RTRAFQ9CQE8 Gm24705-201ENSMUST00000082808 107 ntBASIC-1.96□□□□□ -2.72
RTRAFQ9CQE8 Gm23244-201ENSMUST00000083375 92 ntBASIC-1.96□□□□□ -2.72
RTRAFQ9CQE8 Gm25061-201ENSMUST00000104665 107 ntBASIC-1.97□□□□□ -2.72
RTRAFQ9CQE8 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.97□□□□□ -2.72
RTRAFQ9CQE8 Gm23477-201ENSMUST00000158882 128 ntBASIC-1.97□□□□□ -2.72
RTRAFQ9CQE8 Gm24167-201ENSMUST00000177733 124 ntBASIC-1.97□□□□□ -2.72
RTRAFQ9CQE8 Gm24028-201ENSMUST00000178991 124 ntBASIC-1.97□□□□□ -2.72
RTRAFQ9CQE8 AC160962.3-201ENSMUST00000225914 112 ntBASIC-1.97□□□□□ -2.72
RTRAFQ9CQE8 Gm25087-201ENSMUST00000101992 78 ntBASIC-1.98□□□□□ -2.73
RTRAFQ9CQE8 Gm25652-201ENSMUST00000083780 103 ntBASIC-1.98□□□□□ -2.73
RTRAFQ9CQE8 Gm26467-201ENSMUST00000097257 78 ntBASIC-1.98□□□□□ -2.73
RTRAFQ9CQE8 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-1.99□□□□□ -2.73
RTRAFQ9CQE8 Gm26104-201ENSMUST00000157250 108 ntBASIC-1.99□□□□□ -2.73
RTRAFQ9CQE8 Gm22354-201ENSMUST00000083919 70 ntBASIC-1.99□□□□□ -2.73
RTRAFQ9CQE8 Mir297a-2-201ENSMUST00000103795 90 ntBASIC-2□□□□□ -2.73
RTRAFQ9CQE8 Gm22016-201ENSMUST00000158793 114 ntBASIC-2□□□□□ -2.73
RTRAFQ9CQE8 Gm24197-201ENSMUST00000175085 109 ntBASIC-2□□□□□ -2.73
RTRAFQ9CQE8 Gm24091-201ENSMUST00000082550 83 ntBASIC-2□□□□□ -2.73
RTRAFQ9CQE8 Gm23711-201ENSMUST00000083856 83 ntBASIC-2□□□□□ -2.73
RTRAFQ9CQE8 AC122210.2-201ENSMUST00000220216 115 ntBASIC-2.01□□□□□ -2.73
RTRAFQ9CQE8 Gm23570-201ENSMUST00000083029 104 ntBASIC-2.01□□□□□ -2.73
RTRAFQ9CQE8 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-2.02□□□□□ -2.73
RTRAFQ9CQE8 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-2.02□□□□□ -2.73
RTRAFQ9CQE8 Mir297-1-201ENSMUST00000103800 76 ntBASIC-2.03□□□□□ -2.73
RTRAFQ9CQE8 Mir3064-201ENSMUST00000175532 67 ntBASIC-2.03□□□□□ -2.73
RTRAFQ9CQE8 Gm26375-201ENSMUST00000101829 106 ntBASIC-2.04□□□□□ -2.74
RTRAFQ9CQE8 Gm22717-201ENSMUST00000122703 171 ntBASIC-2.04□□□□□ -2.74
RTRAFQ9CQE8 Gm24459-201ENSMUST00000082730 86 ntBASIC-2.04□□□□□ -2.74
RTRAFQ9CQE8 Gm24234-201ENSMUST00000104316 107 ntBASIC-2.06□□□□□ -2.74
RTRAFQ9CQE8 Gm24673-201ENSMUST00000116948 124 ntBASIC-2.06□□□□□ -2.74
RTRAFQ9CQE8 Gm23108-201ENSMUST00000178295 124 ntBASIC-2.06□□□□□ -2.74
RTRAFQ9CQE8 Gm20734-201ENSMUST00000216939 193 ntBASIC-2.07□□□□□ -2.74
RTRAFQ9CQE8 Gm25326-201ENSMUST00000101903 107 ntBASIC-2.09□□□□□ -2.74
RTRAFQ9CQE8 Gm23573-201ENSMUST00000104408 107 ntBASIC-2.09□□□□□ -2.74
RTRAFQ9CQE8 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC-2.09□□□□□ -2.74
RTRAFQ9CQE8 Gm23644-201ENSMUST00000157856 77 ntBASIC-2.09□□□□□ -2.74
RTRAFQ9CQE8 Gm25995-201ENSMUST00000175396 142 ntBASIC-2.09□□□□□ -2.74
RTRAFQ9CQE8 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC-2.09□□□□□ -2.74
RTRAFQ9CQE8 Mir367-201ENSMUST00000083479 75 ntBASIC-2.09□□□□□ -2.74
RTRAFQ9CQE8 Gm22213-201ENSMUST00000157564 119 ntBASIC-2.1□□□□□ -2.75
RTRAFQ9CQE8 Gm25380-201ENSMUST00000175463 107 ntBASIC-2.1□□□□□ -2.75
RTRAFQ9CQE8 Gm24641-201ENSMUST00000178055 107 ntBASIC-2.1□□□□□ -2.75
RTRAFQ9CQE8 Gm25484-201ENSMUST00000178217 107 ntBASIC-2.1□□□□□ -2.75
RTRAFQ9CQE8 Gm26138-201ENSMUST00000179236 107 ntBASIC-2.1□□□□□ -2.75
RTRAFQ9CQE8 Gm22821-201ENSMUST00000179288 107 ntBASIC-2.1□□□□□ -2.75
RTRAFQ9CQE8 Gm37646-201ENSMUST00000191756 111 ntBASIC-2.1□□□□□ -2.75
RTRAFQ9CQE8 Mir451b-201ENSMUST00000196157 72 ntBASIC-2.1□□□□□ -2.75
RTRAFQ9CQE8 Gm23298-201ENSMUST00000083181 107 ntBASIC-2.1□□□□□ -2.75
RTRAFQ9CQE8 Gm22057-201ENSMUST00000083387 107 ntBASIC-2.1□□□□□ -2.75
RTRAFQ9CQE8 Gm25516-201ENSMUST00000083857 107 ntBASIC-2.1□□□□□ -2.75
RTRAFQ9CQE8 Gm22842-201ENSMUST00000157709 118 ntBASIC-2.12□□□□□ -2.75
RTRAFQ9CQE8 Gm22729-201ENSMUST00000158088 129 ntBASIC-2.12□□□□□ -2.75
RTRAFQ9CQE8 Gm22464-201ENSMUST00000175273 64 ntBASIC-2.12□□□□□ -2.75
RTRAFQ9CQE8 Gm24203-201ENSMUST00000082949 114 ntBASIC-2.12□□□□□ -2.75
RTRAFQ9CQE8 Gm23678-201ENSMUST00000083157 107 ntBASIC-2.12□□□□□ -2.75
RTRAFQ9CQE8 Gm24605-201ENSMUST00000104772 96 ntBASIC-2.13□□□□□ -2.75
RTRAFQ9CQE8 Gm24674-201ENSMUST00000179194 104 ntBASIC-2.15□□□□□ -2.75
RTRAFQ9CQE8 Gm27987-201ENSMUST00000184023 93 ntBASIC-2.16□□□□□ -2.76
RTRAFQ9CQE8 Gm25601-201ENSMUST00000158356 105 ntBASIC-2.17□□□□□ -2.76
RTRAFQ9CQE8 Gm23817-201ENSMUST00000158449 104 ntBASIC-2.17□□□□□ -2.76
RTRAFQ9CQE8 Gm23856-201ENSMUST00000158380 99 ntBASIC-2.18□□□□□ -2.76
Retrieved 100 of 76,532 protein–RNA pairs in 155 ms