Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Gm22057-201ENSMUST00000083387 107 ntBASIC-0.97□□□□□ -2.57
Sf3b1Q99NB9 Gm25516-201ENSMUST00000083857 107 ntBASIC-0.97□□□□□ -2.57
Sf3b1Q99NB9 Gm23909-201ENSMUST00000104598 131 ntBASIC-0.98□□□□□ -2.57
Sf3b1Q99NB9 Gm25158-201ENSMUST00000177681 121 ntBASIC-0.98□□□□□ -2.57
Sf3b1Q99NB9 Gm26229-201ENSMUST00000179699 121 ntBASIC-0.98□□□□□ -2.57
Sf3b1Q99NB9 Gm24148-201ENSMUST00000082762 80 ntBASIC-0.98□□□□□ -2.57
Sf3b1Q99NB9 Mir297b-201ENSMUST00000102268 109 ntBASIC-0.99□□□□□ -2.57
Sf3b1Q99NB9 Gm23590-201ENSMUST00000157661 104 ntBASIC-0.99□□□□□ -2.57
Sf3b1Q99NB9 Gm26262-201ENSMUST00000158024 127 ntBASIC-0.99□□□□□ -2.57
Sf3b1Q99NB9 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-0.99□□□□□ -2.57
Sf3b1Q99NB9 Gm25740-201ENSMUST00000180247 107 ntBASIC-0.99□□□□□ -2.57
Sf3b1Q99NB9 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-0.99□□□□□ -2.57
Sf3b1Q99NB9 Gm22354-201ENSMUST00000083919 70 ntBASIC-0.99□□□□□ -2.57
Sf3b1Q99NB9 Mir876-201ENSMUST00000104659 81 ntBASIC-1□□□□□ -2.57
Sf3b1Q99NB9 Gm11333-201ENSMUST00000119479 148 ntBASIC-1□□□□□ -2.57
Sf3b1Q99NB9 CT030170.1-201ENSMUST00000222183 148 ntBASIC-1□□□□□ -2.57
Sf3b1Q99NB9 Gm24988-201ENSMUST00000104460 121 ntBASIC-1.01□□□□□ -2.57
Sf3b1Q99NB9 Gm25061-201ENSMUST00000104665 107 ntBASIC-1.01□□□□□ -2.57
Sf3b1Q99NB9 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-1.01□□□□□ -2.57
Sf3b1Q99NB9 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-1.01□□□□□ -2.57
Sf3b1Q99NB9 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-1.01□□□□□ -2.57
Sf3b1Q99NB9 Gm24003-201ENSMUST00000158455 100 ntBASIC-1.02□□□□□ -2.57
Sf3b1Q99NB9 Mir466m-201ENSMUST00000175052 84 ntBASIC-1.02□□□□□ -2.57
Sf3b1Q99NB9 Gm24091-201ENSMUST00000082550 83 ntBASIC-1.02□□□□□ -2.57
Sf3b1Q99NB9 Gm22828-201ENSMUST00000083768 107 ntBASIC-1.02□□□□□ -2.57
Sf3b1Q99NB9 Gm23711-201ENSMUST00000083856 83 ntBASIC-1.02□□□□□ -2.57
Sf3b1Q99NB9 Gm22729-201ENSMUST00000158088 129 ntBASIC-1.03□□□□□ -2.57
Sf3b1Q99NB9 Gm23216-201ENSMUST00000179545 107 ntBASIC-1.03□□□□□ -2.57
Sf3b1Q99NB9 Mir15b-201ENSMUST00000083646 64 ntBASIC-1.03□□□□□ -2.57
Sf3b1Q99NB9 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-1.03□□□□□ -2.57
Sf3b1Q99NB9 Mir7055-201ENSMUST00000197423 59 ntBASIC-1.04□□□□□ -2.58
Sf3b1Q99NB9 Gm43943-201ENSMUST00000204201 113 ntBASIC-1.04□□□□□ -2.58
Sf3b1Q99NB9 Gm25987-201ENSMUST00000083234 107 ntBASIC-1.04□□□□□ -2.58
Sf3b1Q99NB9 Gm25815-201ENSMUST00000082755 107 ntBASIC-1.05□□□□□ -2.58
Sf3b1Q99NB9 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-1.05□□□□□ -2.58
Sf3b1Q99NB9 Gm25428-201ENSMUST00000157608 114 ntBASIC-1.06□□□□□ -2.58
Sf3b1Q99NB9 Gm22381-201ENSMUST00000158186 107 ntBASIC-1.06□□□□□ -2.58
Sf3b1Q99NB9 AC154832.1-201ENSMUST00000228928 141 ntBASIC-1.06□□□□□ -2.58
Sf3b1Q99NB9 Snord57-201ENSMUST00000083338 72 ntBASIC-1.06□□□□□ -2.58
Sf3b1Q99NB9 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-1.07□□□□□ -2.58
Sf3b1Q99NB9 Snord123-201ENSMUST00000158692 71 ntBASIC-1.07□□□□□ -2.58
Sf3b1Q99NB9 Gm29344-201ENSMUST00000068143 210 ntBASIC-1.07□□□□□ -2.58
Sf3b1Q99NB9 Gm23613-201ENSMUST00000082596 87 ntBASIC-1.07□□□□□ -2.58
Sf3b1Q99NB9 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.07□□□□□ -2.58
Sf3b1Q99NB9 Mir543-201ENSMUST00000102286 76 ntBASIC-1.08□□□□□ -2.58
Sf3b1Q99NB9 Gm22013-201ENSMUST00000158788 103 ntBASIC-1.08□□□□□ -2.58
Sf3b1Q99NB9 Mir6964-201ENSMUST00000200252 59 ntBASIC-1.08□□□□□ -2.58
Sf3b1Q99NB9 Gm23570-201ENSMUST00000083029 104 ntBASIC-1.08□□□□□ -2.58
Sf3b1Q99NB9 Mir450b-201ENSMUST00000102095 82 ntBASIC-1.09□□□□□ -2.58
Sf3b1Q99NB9 Gm25112-201ENSMUST00000122680 104 ntBASIC-1.09□□□□□ -2.58
Sf3b1Q99NB9 Gm25862-201ENSMUST00000158250 129 ntBASIC-1.09□□□□□ -2.58
Sf3b1Q99NB9 Snord8-201ENSMUST00000175303 110 ntBASIC-1.09□□□□□ -2.58
Sf3b1Q99NB9 Mir3064-201ENSMUST00000175532 67 ntBASIC-1.1□□□□□ -2.59
Sf3b1Q99NB9 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-1.1□□□□□ -2.59
Sf3b1Q99NB9 Gm24674-201ENSMUST00000179194 104 ntBASIC-1.12□□□□□ -2.59
Sf3b1Q99NB9 Gm26491-201ENSMUST00000179268 121 ntBASIC-1.12□□□□□ -2.59
Sf3b1Q99NB9 Gm22454-201ENSMUST00000082583 107 ntBASIC-1.12□□□□□ -2.59
Sf3b1Q99NB9 Mir297-1-201ENSMUST00000103800 76 ntBASIC-1.13□□□□□ -2.59
Sf3b1Q99NB9 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC-1.13□□□□□ -2.59
Sf3b1Q99NB9 Gm22845-201ENSMUST00000157712 104 ntBASIC-1.13□□□□□ -2.59
Sf3b1Q99NB9 Gm23812-201ENSMUST00000175156 84 ntBASIC-1.13□□□□□ -2.59
Sf3b1Q99NB9 Gm23374-201ENSMUST00000175408 84 ntBASIC-1.13□□□□□ -2.59
Sf3b1Q99NB9 Gm27944-201ENSMUST00000185155 103 ntBASIC-1.13□□□□□ -2.59
Sf3b1Q99NB9 Mir494-201ENSMUST00000093632 85 ntBASIC-1.13□□□□□ -2.59
Sf3b1Q99NB9 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.14□□□□□ -2.59
Sf3b1Q99NB9 Gm25429-201ENSMUST00000157607 132 ntBASIC-1.14□□□□□ -2.59
Sf3b1Q99NB9 Gm24051-201ENSMUST00000158622 75 ntBASIC-1.14□□□□□ -2.59
Sf3b1Q99NB9 Gm23477-201ENSMUST00000158882 128 ntBASIC-1.14□□□□□ -2.59
Sf3b1Q99NB9 Gm27987-201ENSMUST00000184023 93 ntBASIC-1.14□□□□□ -2.59
Sf3b1Q99NB9 AC161271.1-201ENSMUST00000226914 150 ntBASIC-1.14□□□□□ -2.59
Sf3b1Q99NB9 Gm22805-201ENSMUST00000082739 107 ntBASIC-1.14□□□□□ -2.59
Sf3b1Q99NB9 Gm24047-201ENSMUST00000102405 104 ntBASIC-1.15□□□□□ -2.59
Sf3b1Q99NB9 Gm26043-201ENSMUST00000116912 91 ntBASIC-1.15□□□□□ -2.59
Sf3b1Q99NB9 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.15□□□□□ -2.59
Sf3b1Q99NB9 AC122335.1-201ENSMUST00000217587 175 ntBASIC-1.15□□□□□ -2.59
Sf3b1Q99NB9 n-R5s153-201ENSMUST00000083451 116 ntBASIC-1.15□□□□□ -2.59
Sf3b1Q99NB9 Gm25087-201ENSMUST00000101992 78 ntBASIC-1.15□□□□□ -2.59
Sf3b1Q99NB9 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.15□□□□□ -2.59
Sf3b1Q99NB9 Mir6339-201ENSMUST00000185120 117 ntBASIC-1.15□□□□□ -2.59
Sf3b1Q99NB9 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC-1.15□□□□□ -2.59
Sf3b1Q99NB9 Gm26467-201ENSMUST00000097257 78 ntBASIC-1.15□□□□□ -2.59
Sf3b1Q99NB9 Gm23653-201ENSMUST00000116751 97 ntBASIC-1.16□□□□□ -2.6
Sf3b1Q99NB9 Gm22717-201ENSMUST00000122703 171 ntBASIC-1.16□□□□□ -2.6
Sf3b1Q99NB9 Gm23856-201ENSMUST00000158380 99 ntBASIC-1.18□□□□□ -2.6
Sf3b1Q99NB9 Gm22016-201ENSMUST00000158793 114 ntBASIC-1.18□□□□□ -2.6
Sf3b1Q99NB9 Gm24197-201ENSMUST00000175085 109 ntBASIC-1.18□□□□□ -2.6
Sf3b1Q99NB9 Gm26375-201ENSMUST00000101829 106 ntBASIC-1.2□□□□□ -2.6
Sf3b1Q99NB9 Gm24482-201ENSMUST00000117005 93 ntBASIC-1.2□□□□□ -2.6
Sf3b1Q99NB9 Gm25652-201ENSMUST00000083780 103 ntBASIC-1.2□□□□□ -2.6
Sf3b1Q99NB9 Gm25326-201ENSMUST00000101903 107 ntBASIC-1.21□□□□□ -2.6
Sf3b1Q99NB9 Gm24612-201ENSMUST00000083267 107 ntBASIC-1.21□□□□□ -2.6
Sf3b1Q99NB9 Gm23573-201ENSMUST00000104408 107 ntBASIC-1.22□□□□□ -2.61
Sf3b1Q99NB9 Gm23376-201ENSMUST00000082938 160 ntBASIC-1.22□□□□□ -2.61
Sf3b1Q99NB9 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.22□□□□□ -2.61
Sf3b1Q99NB9 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.23□□□□□ -2.61
Sf3b1Q99NB9 Gm24495-201ENSMUST00000178575 79 ntBASIC-1.23□□□□□ -2.61
Sf3b1Q99NB9 Gm22253-201ENSMUST00000179870 79 ntBASIC-1.23□□□□□ -2.61
Sf3b1Q99NB9 Gm24586-201ENSMUST00000116695 89 ntBASIC-1.25□□□□□ -2.61
Sf3b1Q99NB9 Gm20305-201ENSMUST00000193226 177 ntBASIC-1.25□□□□□ -2.61
Sf3b1Q99NB9 AC238676.2-201ENSMUST00000220910 94 ntBASIC-1.25□□□□□ -2.61
Retrieved 100 of 76,532 protein–RNA pairs in 188.4 ms