Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm24508-201ENSMUST00000180104 107 ntBASIC-0.2□□□□□ -2.44
Pcdha3Q91Y16 AC157278.1-201ENSMUST00000221621 148 ntBASIC-0.2□□□□□ -2.44
Pcdha3Q91Y16 Gm25802-201ENSMUST00000082639 77 ntBASIC-0.2□□□□□ -2.44
Pcdha3Q91Y16 Mir214-201ENSMUST00000083582 110 ntBASIC-0.21□□□□□ -2.44
Pcdha3Q91Y16 Gm23173-201ENSMUST00000157161 160 ntBASIC-0.22□□□□□ -2.44
Pcdha3Q91Y16 Snord42b-201ENSMUST00000083742 69 ntBASIC-0.22□□□□□ -2.44
Pcdha3Q91Y16 Gm23749-201ENSMUST00000104223 131 ntBASIC-0.23□□□□□ -2.45
Pcdha3Q91Y16 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.24□□□□□ -2.45
Pcdha3Q91Y16 Gm24377-201ENSMUST00000104398 131 ntBASIC-0.24□□□□□ -2.45
Pcdha3Q91Y16 Gm25497-201ENSMUST00000104425 132 ntBASIC-0.24□□□□□ -2.45
Pcdha3Q91Y16 Gm24226-201ENSMUST00000158826 97 ntBASIC-0.24□□□□□ -2.45
Pcdha3Q91Y16 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.24□□□□□ -2.45
Pcdha3Q91Y16 Gm27450-201ENSMUST00000104632 90 ntBASIC-0.25□□□□□ -2.45
Pcdha3Q91Y16 Gm22335-201ENSMUST00000157724 99 ntBASIC-0.25□□□□□ -2.45
Pcdha3Q91Y16 Gm24927-201ENSMUST00000083397 107 ntBASIC-0.25□□□□□ -2.45
Pcdha3Q91Y16 Gm25087-201ENSMUST00000101992 78 ntBASIC-0.26□□□□□ -2.45
Pcdha3Q91Y16 Gm24793-201ENSMUST00000104289 132 ntBASIC-0.26□□□□□ -2.45
Pcdha3Q91Y16 Gm25354-201ENSMUST00000179110 105 ntBASIC-0.26□□□□□ -2.45
Pcdha3Q91Y16 Gm25137-201ENSMUST00000083251 110 ntBASIC-0.26□□□□□ -2.45
Pcdha3Q91Y16 Gm26467-201ENSMUST00000097257 78 ntBASIC-0.26□□□□□ -2.45
Pcdha3Q91Y16 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.27□□□□□ -2.45
Pcdha3Q91Y16 Gm22016-201ENSMUST00000158793 114 ntBASIC-0.27□□□□□ -2.45
Pcdha3Q91Y16 Mir6915-201ENSMUST00000198839 69 ntBASIC-0.27□□□□□ -2.45
Pcdha3Q91Y16 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.27□□□□□ -2.45
Pcdha3Q91Y16 Gm23730-201ENSMUST00000083236 107 ntBASIC-0.27□□□□□ -2.45
Pcdha3Q91Y16 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.3□□□□□ -2.46
Pcdha3Q91Y16 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC-0.3□□□□□ -2.46
Pcdha3Q91Y16 Gm27798-201ENSMUST00000184989 71 ntBASIC-0.3□□□□□ -2.46
Pcdha3Q91Y16 AC167019.1-201ENSMUST00000227913 106 ntBASIC-0.3□□□□□ -2.46
Pcdha3Q91Y16 Gm24455-201ENSMUST00000083348 131 ntBASIC-0.3□□□□□ -2.46
Pcdha3Q91Y16 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-0.3□□□□□ -2.46
Pcdha3Q91Y16 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.3□□□□□ -2.46
Pcdha3Q91Y16 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.31□□□□□ -2.46
Pcdha3Q91Y16 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.31□□□□□ -2.46
Pcdha3Q91Y16 Gm27784-201ENSMUST00000184926 113 ntBASIC-0.31□□□□□ -2.46
Pcdha3Q91Y16 Gm25652-201ENSMUST00000083780 103 ntBASIC-0.32□□□□□ -2.46
Pcdha3Q91Y16 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.33□□□□□ -2.46
Pcdha3Q91Y16 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.33□□□□□ -2.46
Pcdha3Q91Y16 Gm24971-201ENSMUST00000175581 110 ntBASIC-0.33□□□□□ -2.46
Pcdha3Q91Y16 Gm24587-201ENSMUST00000116697 89 ntBASIC-0.34□□□□□ -2.46
Pcdha3Q91Y16 Mir1948-201ENSMUST00000157325 85 ntBASIC-0.34□□□□□ -2.46
Pcdha3Q91Y16 Gm22965-201ENSMUST00000157958 101 ntBASIC-0.34□□□□□ -2.46
Pcdha3Q91Y16 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.34□□□□□ -2.46
Pcdha3Q91Y16 Gm25472-201ENSMUST00000175454 78 ntBASIC-0.34□□□□□ -2.46
Pcdha3Q91Y16 Gm26139-201ENSMUST00000180098 107 ntBASIC-0.34□□□□□ -2.46
Pcdha3Q91Y16 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.34□□□□□ -2.46
Pcdha3Q91Y16 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-0.34□□□□□ -2.46
Pcdha3Q91Y16 Gm23690-201ENSMUST00000083036 94 ntBASIC-0.34□□□□□ -2.46
Pcdha3Q91Y16 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.35□□□□□ -2.47
Pcdha3Q91Y16 Gm23607-201ENSMUST00000104550 126 ntBASIC-0.36□□□□□ -2.47
Pcdha3Q91Y16 Gm24996-201ENSMUST00000158390 99 ntBASIC-0.36□□□□□ -2.47
Pcdha3Q91Y16 Gm25326-201ENSMUST00000101903 107 ntBASIC-0.37□□□□□ -2.47
Pcdha3Q91Y16 Mir702-201ENSMUST00000102285 109 ntBASIC-0.37□□□□□ -2.47
Pcdha3Q91Y16 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.37□□□□□ -2.47
Pcdha3Q91Y16 Gm22039-201ENSMUST00000157278 132 ntBASIC-0.37□□□□□ -2.47
Pcdha3Q91Y16 Gm23240-201ENSMUST00000083009 121 ntBASIC-0.37□□□□□ -2.47
Pcdha3Q91Y16 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-0.38□□□□□ -2.47
Pcdha3Q91Y16 Gm24725-201ENSMUST00000158229 125 ntBASIC-0.38□□□□□ -2.47
Pcdha3Q91Y16 Gm22746-201ENSMUST00000082494 107 ntBASIC-0.39□□□□□ -2.47
Pcdha3Q91Y16 Mir141-201ENSMUST00000083540 72 ntBASIC-0.39□□□□□ -2.47
Pcdha3Q91Y16 Gm24259-201ENSMUST00000083740 107 ntBASIC-0.39□□□□□ -2.47
Pcdha3Q91Y16 Gm24336-201ENSMUST00000104203 146 ntBASIC-0.4□□□□□ -2.47
Pcdha3Q91Y16 Gm25772-201ENSMUST00000158574 56 ntBASIC-0.41□□□□□ -2.48
Pcdha3Q91Y16 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-0.41□□□□□ -2.48
Pcdha3Q91Y16 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.41□□□□□ -2.48
Pcdha3Q91Y16 Gm23573-201ENSMUST00000104408 107 ntBASIC-0.42□□□□□ -2.48
Pcdha3Q91Y16 Gm24797-201ENSMUST00000178103 107 ntBASIC-0.42□□□□□ -2.48
Pcdha3Q91Y16 Gm26375-201ENSMUST00000101829 106 ntBASIC-0.43□□□□□ -2.48
Pcdha3Q91Y16 Gm24396-201ENSMUST00000116905 93 ntBASIC-0.44□□□□□ -2.48
Pcdha3Q91Y16 Gm22078-201ENSMUST00000157593 103 ntBASIC-0.44□□□□□ -2.48
Pcdha3Q91Y16 Gm25950-201ENSMUST00000175331 100 ntBASIC-0.45□□□□□ -2.48
Pcdha3Q91Y16 Gm25158-201ENSMUST00000177681 121 ntBASIC-0.45□□□□□ -2.48
Pcdha3Q91Y16 Gm26229-201ENSMUST00000179699 121 ntBASIC-0.45□□□□□ -2.48
Pcdha3Q91Y16 Gm42773-201ENSMUST00000196962 148 ntBASIC-0.45□□□□□ -2.48
Pcdha3Q91Y16 Gm25465-201ENSMUST00000157716 105 ntBASIC-0.46□□□□□ -2.48
Pcdha3Q91Y16 Gm24723-201ENSMUST00000158233 132 ntBASIC-0.46□□□□□ -2.48
Pcdha3Q91Y16 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.46□□□□□ -2.48
Pcdha3Q91Y16 Mir183-201ENSMUST00000083685 70 ntBASIC-0.46□□□□□ -2.48
Pcdha3Q91Y16 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-0.47□□□□□ -2.48
Pcdha3Q91Y16 Mir96-201ENSMUST00000083652 106 ntBASIC-0.47□□□□□ -2.48
Pcdha3Q91Y16 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.48□□□□□ -2.49
Pcdha3Q91Y16 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.49□□□□□ -2.49
Pcdha3Q91Y16 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.5□□□□□ -2.49
Pcdha3Q91Y16 Gm27735-201ENSMUST00000185085 76 ntBASIC-0.5□□□□□ -2.49
Pcdha3Q91Y16 Mir136-201ENSMUST00000199494 62 ntBASIC-0.5□□□□□ -2.49
Pcdha3Q91Y16 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.5□□□□□ -2.49
Pcdha3Q91Y16 Mir18b-201ENSMUST00000103923 83 ntBASIC-0.51□□□□□ -2.49
Pcdha3Q91Y16 Mir6904-201ENSMUST00000183443 67 ntBASIC-0.51□□□□□ -2.49
Pcdha3Q91Y16 Gm24701-201ENSMUST00000101946 105 ntBASIC-0.52□□□□□ -2.49
Pcdha3Q91Y16 n-R5s8-201ENSMUST00000104121 118 ntBASIC-0.52□□□□□ -2.49
Pcdha3Q91Y16 Gm22305-201ENSMUST00000082690 108 ntBASIC-0.52□□□□□ -2.49
Pcdha3Q91Y16 Gm22357-201ENSMUST00000082882 83 ntBASIC-0.54□□□□□ -2.5
Pcdha3Q91Y16 AC161271.1-201ENSMUST00000226914 150 ntBASIC-0.55□□□□□ -2.5
Pcdha3Q91Y16 Gm25388-201ENSMUST00000157339 151 ntBASIC-0.56□□□□□ -2.5
Pcdha3Q91Y16 Gm45688-201ENSMUST00000210002 101 ntBASIC-0.56□□□□□ -2.5
Pcdha3Q91Y16 Mir669m-1-201ENSMUST00000158945 98 ntBASIC-0.57□□□□□ -2.5
Pcdha3Q91Y16 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.58□□□□□ -2.5
Pcdha3Q91Y16 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.58□□□□□ -2.5
Pcdha3Q91Y16 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.59□□□□□ -2.5
Pcdha3Q91Y16 Gm24381-201ENSMUST00000122697 104 ntBASIC-0.6□□□□□ -2.51
Retrieved 100 of 76,532 protein–RNA pairs in 129.8 ms