Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm22239-201ENSMUST00000175220 103 ntBASIC0.82□□□□□ -2.28
Trim47Q8C0E3 Gm24323-201ENSMUST00000175342 77 ntBASIC0.82□□□□□ -2.28
Trim47Q8C0E3 Mir3109-201ENSMUST00000175301 88 ntBASIC0.81□□□□□ -2.28
Trim47Q8C0E3 Gm22232-201ENSMUST00000104654 94 ntBASIC0.79□□□□□ -2.28
Trim47Q8C0E3 Mir466f-1-201ENSMUST00000104779 94 ntBASIC0.79□□□□□ -2.28
Trim47Q8C0E3 Gm38113-201ENSMUST00000193704 201 ntBASIC0.79□□□□□ -2.28
Trim47Q8C0E3 Gm23735-201ENSMUST00000082551 134 ntBASIC0.79□□□□□ -2.28
Trim47Q8C0E3 Gm27749-201ENSMUST00000183651 125 ntBASIC0.78□□□□□ -2.28
Trim47Q8C0E3 Gm38208-201ENSMUST00000192476 114 ntBASIC0.78□□□□□ -2.28
Trim47Q8C0E3 Mir702-201ENSMUST00000102285 109 ntBASIC0.77□□□□□ -2.29
Trim47Q8C0E3 Gm45541-201ENSMUST00000210443 54 ntBASIC0.77□□□□□ -2.29
Trim47Q8C0E3 Gm23607-201ENSMUST00000104550 126 ntBASIC0.76□□□□□ -2.29
Trim47Q8C0E3 Gm24772-201ENSMUST00000158507 110 ntBASIC0.74□□□□□ -2.29
Trim47Q8C0E3 Gm27784-201ENSMUST00000184926 113 ntBASIC0.74□□□□□ -2.29
Trim47Q8C0E3 Gm37646-201ENSMUST00000191756 111 ntBASIC0.74□□□□□ -2.29
Trim47Q8C0E3 Mir6896-201ENSMUST00000198033 73 ntBASIC0.74□□□□□ -2.29
Trim47Q8C0E3 Gm22838-201ENSMUST00000158437 99 ntBASIC0.73□□□□□ -2.29
Trim47Q8C0E3 Gm26285-201ENSMUST00000177923 107 ntBASIC0.73□□□□□ -2.29
Trim47Q8C0E3 Gm23622-201ENSMUST00000082460 107 ntBASIC0.73□□□□□ -2.29
Trim47Q8C0E3 Gm24194-201ENSMUST00000116805 90 ntBASIC0.72□□□□□ -2.29
Trim47Q8C0E3 Gm20473-201ENSMUST00000173064 112 ntBASIC0.72□□□□□ -2.29
Trim47Q8C0E3 Mir295-201ENSMUST00000104694 69 ntBASIC0.69□□□□□ -2.3
Trim47Q8C0E3 Gm23605-201ENSMUST00000157255 127 ntBASIC0.69□□□□□ -2.3
Trim47Q8C0E3 Gm25791-201ENSMUST00000083292 137 ntBASIC0.69□□□□□ -2.3
Trim47Q8C0E3 Mir216a-201ENSMUST00000083605 72 ntBASIC0.69□□□□□ -2.3
Trim47Q8C0E3 Gm24963-201ENSMUST00000157916 144 ntBASIC0.68□□□□□ -2.3
Trim47Q8C0E3 Gm27607-201ENSMUST00000185162 122 ntBASIC0.67□□□□□ -2.3
Trim47Q8C0E3 Gm25375-201ENSMUST00000158157 135 ntBASIC0.66□□□□□ -2.3
Trim47Q8C0E3 Gm25862-201ENSMUST00000158250 129 ntBASIC0.66□□□□□ -2.3
Trim47Q8C0E3 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.66□□□□□ -2.3
Trim47Q8C0E3 Gm26236-201ENSMUST00000175536 137 ntBASIC0.66□□□□□ -2.3
Trim47Q8C0E3 Gm23159-201ENSMUST00000175088 77 ntBASIC0.64□□□□□ -2.31
Trim47Q8C0E3 Mir7651-201ENSMUST00000184154 64 ntBASIC0.61□□□□□ -2.31
Trim47Q8C0E3 Mir669f-201ENSMUST00000103850 121 ntBASIC0.6□□□□□ -2.31
Trim47Q8C0E3 Gm25497-201ENSMUST00000104425 132 ntBASIC0.6□□□□□ -2.31
Trim47Q8C0E3 Gm23442-201ENSMUST00000082919 134 ntBASIC0.6□□□□□ -2.31
Trim47Q8C0E3 Gm28001-201ENSMUST00000183561 117 ntBASIC0.59□□□□□ -2.31
Trim47Q8C0E3 Gm25431-201ENSMUST00000101978 107 ntBASIC0.58□□□□□ -2.32
Trim47Q8C0E3 Gm23909-201ENSMUST00000104598 131 ntBASIC0.58□□□□□ -2.32
Trim47Q8C0E3 Gm24467-201ENSMUST00000157887 126 ntBASIC0.58□□□□□ -2.32
Trim47Q8C0E3 Gm24843-201ENSMUST00000158682 76 ntBASIC0.58□□□□□ -2.32
Trim47Q8C0E3 Gm26303-201ENSMUST00000116845 119 ntBASIC0.57□□□□□ -2.32
Trim47Q8C0E3 Gm25510-201ENSMUST00000116986 123 ntBASIC0.57□□□□□ -2.32
Trim47Q8C0E3 Mir344-2-201ENSMUST00000175446 80 ntBASIC0.57□□□□□ -2.32
Trim47Q8C0E3 Mir327-201ENSMUST00000199328 69 ntBASIC0.57□□□□□ -2.32
Trim47Q8C0E3 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
Trim47Q8C0E3 Gm25388-201ENSMUST00000157339 151 ntBASIC0.56□□□□□ -2.32
Trim47Q8C0E3 Gm23994-201ENSMUST00000158059 88 ntBASIC0.55□□□□□ -2.32
Trim47Q8C0E3 Gm43432-201ENSMUST00000196352 121 ntBASIC0.55□□□□□ -2.32
Trim47Q8C0E3 Scarna8-201ENSMUST00000158333 131 ntBASIC0.53□□□□□ -2.32
Trim47Q8C0E3 Gm22088-201ENSMUST00000158341 117 ntBASIC0.53□□□□□ -2.32
Trim47Q8C0E3 Mir466q-201ENSMUST00000175249 76 ntBASIC0.53□□□□□ -2.32
Trim47Q8C0E3 Gm24971-201ENSMUST00000175581 110 ntBASIC0.53□□□□□ -2.32
Trim47Q8C0E3 Gm25023-201ENSMUST00000082977 107 ntBASIC0.53□□□□□ -2.32
Trim47Q8C0E3 Gm23278-201ENSMUST00000157911 143 ntBASIC0.52□□□□□ -2.33
Trim47Q8C0E3 Gm22925-201ENSMUST00000174956 102 ntBASIC0.52□□□□□ -2.33
Trim47Q8C0E3 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.51□□□□□ -2.33
Trim47Q8C0E3 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.51□□□□□ -2.33
Trim47Q8C0E3 Snord91a-201ENSMUST00000104305 93 ntBASIC0.5□□□□□ -2.33
Trim47Q8C0E3 Gm27475-201ENSMUST00000183420 61 ntBASIC0.5□□□□□ -2.33
Trim47Q8C0E3 Mir669m-2-201ENSMUST00000158355 98 ntBASIC0.49□□□□□ -2.33
Trim47Q8C0E3 Mir7077-201ENSMUST00000183991 57 ntBASIC0.49□□□□□ -2.33
Trim47Q8C0E3 Gm23531-201ENSMUST00000104567 68 ntBASIC0.48□□□□□ -2.33
Trim47Q8C0E3 Mir3967-201ENSMUST00000198710 68 ntBASIC0.48□□□□□ -2.33
Trim47Q8C0E3 Gm24097-201ENSMUST00000178720 107 ntBASIC0.47□□□□□ -2.33
Trim47Q8C0E3 Gm44828-201ENSMUST00000203745 106 ntBASIC0.47□□□□□ -2.33
Trim47Q8C0E3 Snord42b-201ENSMUST00000083742 69 ntBASIC0.47□□□□□ -2.33
Trim47Q8C0E3 Gm44347-201ENSMUST00000199602 108 ntBASIC0.46□□□□□ -2.34
Trim47Q8C0E3 Gm44328-201ENSMUST00000199331 75 ntBASIC0.45□□□□□ -2.34
Trim47Q8C0E3 Mir18b-201ENSMUST00000103923 83 ntBASIC0.44□□□□□ -2.34
Trim47Q8C0E3 Gm25885-201ENSMUST00000157779 109 ntBASIC0.44□□□□□ -2.34
Trim47Q8C0E3 Gm23821-201ENSMUST00000158738 106 ntBASIC0.44□□□□□ -2.34
Trim47Q8C0E3 Gm42773-201ENSMUST00000196962 148 ntBASIC0.44□□□□□ -2.34
Trim47Q8C0E3 Gm25995-201ENSMUST00000175396 142 ntBASIC0.41□□□□□ -2.34
Trim47Q8C0E3 Mir8107-201ENSMUST00000184024 117 ntBASIC0.41□□□□□ -2.34
Trim47Q8C0E3 Gm44375-201ENSMUST00000196657 150 ntBASIC0.41□□□□□ -2.34
Trim47Q8C0E3 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.35
Trim47Q8C0E3 Gm24833-201ENSMUST00000116775 120 ntBASIC0.4□□□□□ -2.35
Trim47Q8C0E3 Gm22759-201ENSMUST00000102276 96 ntBASIC0.39□□□□□ -2.35
Trim47Q8C0E3 Snord58b-201ENSMUST00000082937 66 ntBASIC0.38□□□□□ -2.35
Trim47Q8C0E3 Gm22305-201ENSMUST00000082690 108 ntBASIC0.37□□□□□ -2.35
Trim47Q8C0E3 Gm26116-201ENSMUST00000175600 77 ntBASIC0.36□□□□□ -2.35
Trim47Q8C0E3 Mir141-201ENSMUST00000083540 72 ntBASIC0.36□□□□□ -2.35
Trim47Q8C0E3 Mir710-201ENSMUST00000102088 110 ntBASIC0.35□□□□□ -2.35
Trim47Q8C0E3 Gm25137-201ENSMUST00000083251 110 ntBASIC0.34□□□□□ -2.36
Trim47Q8C0E3 Gm22197-201ENSMUST00000116866 58 ntBASIC0.33□□□□□ -2.36
Trim47Q8C0E3 AC154832.1-201ENSMUST00000228928 141 ntBASIC0.33□□□□□ -2.36
Trim47Q8C0E3 Gm24793-201ENSMUST00000104289 132 ntBASIC0.32□□□□□ -2.36
Trim47Q8C0E3 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.32□□□□□ -2.36
Trim47Q8C0E3 Gm25249-201ENSMUST00000175471 78 ntBASIC0.31□□□□□ -2.36
Trim47Q8C0E3 Gm26152-201ENSMUST00000157427 101 ntBASIC0.3□□□□□ -2.36
Trim47Q8C0E3 AC167019.1-201ENSMUST00000227913 106 ntBASIC0.3□□□□□ -2.36
Trim47Q8C0E3 Snord85-201ENSMUST00000083262 73 ntBASIC0.3□□□□□ -2.36
Trim47Q8C0E3 Gm22602-201ENSMUST00000157596 95 ntBASIC0.28□□□□□ -2.36
Trim47Q8C0E3 Mir136-201ENSMUST00000199494 62 ntBASIC0.28□□□□□ -2.36
Trim47Q8C0E3 Gm44303-201ENSMUST00000196348 83 ntBASIC0.27□□□□□ -2.37
Trim47Q8C0E3 Gm24336-201ENSMUST00000104203 146 ntBASIC0.26□□□□□ -2.37
Trim47Q8C0E3 Gm23315-201ENSMUST00000158003 109 ntBASIC0.26□□□□□ -2.37
Trim47Q8C0E3 Gm23811-201ENSMUST00000175155 84 ntBASIC0.25□□□□□ -2.37
Trim47Q8C0E3 Mir6904-201ENSMUST00000183443 67 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 216 ms