Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm27415-201ENSMUST00000183720 95 ntBASIC-0.7□□□□□ -2.52
Ubfd1Q78JW9 n-R5s8-201ENSMUST00000104121 118 ntBASIC-0.71□□□□□ -2.52
Ubfd1Q78JW9 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-0.71□□□□□ -2.52
Ubfd1Q78JW9 Mir145b-201ENSMUST00000184434 75 ntBASIC-0.71□□□□□ -2.52
Ubfd1Q78JW9 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-0.72□□□□□ -2.52
Ubfd1Q78JW9 Gm23955-201ENSMUST00000157214 100 ntBASIC-0.72□□□□□ -2.52
Ubfd1Q78JW9 Gm22335-201ENSMUST00000157724 99 ntBASIC-0.72□□□□□ -2.52
Ubfd1Q78JW9 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-0.73□□□□□ -2.53
Ubfd1Q78JW9 Gm37832-201ENSMUST00000118935 189 ntBASIC-0.74□□□□□ -2.53
Ubfd1Q78JW9 Gm23590-201ENSMUST00000157661 104 ntBASIC-0.74□□□□□ -2.53
Ubfd1Q78JW9 Gm24091-201ENSMUST00000082550 83 ntBASIC-0.74□□□□□ -2.53
Ubfd1Q78JW9 Gm23711-201ENSMUST00000083856 83 ntBASIC-0.74□□□□□ -2.53
Ubfd1Q78JW9 Gm24336-201ENSMUST00000104203 146 ntBASIC-0.75□□□□□ -2.53
Ubfd1Q78JW9 Gm24971-201ENSMUST00000175581 110 ntBASIC-0.75□□□□□ -2.53
Ubfd1Q78JW9 Mir15b-201ENSMUST00000083646 64 ntBASIC-0.75□□□□□ -2.53
Ubfd1Q78JW9 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC-0.76□□□□□ -2.53
Ubfd1Q78JW9 Mir5124b-201ENSMUST00000184251 85 ntBASIC-0.76□□□□□ -2.53
Ubfd1Q78JW9 Mir3064-201ENSMUST00000175532 67 ntBASIC-0.77□□□□□ -2.53
Ubfd1Q78JW9 Mir7043-201ENSMUST00000184219 70 ntBASIC-0.77□□□□□ -2.53
Ubfd1Q78JW9 Mir18b-201ENSMUST00000103923 83 ntBASIC-0.78□□□□□ -2.53
Ubfd1Q78JW9 Mir1187-201ENSMUST00000116936 122 ntBASIC-0.78□□□□□ -2.53
Ubfd1Q78JW9 Gm24495-201ENSMUST00000178575 79 ntBASIC-0.78□□□□□ -2.53
Ubfd1Q78JW9 Gm22253-201ENSMUST00000179870 79 ntBASIC-0.78□□□□□ -2.53
Ubfd1Q78JW9 Gm24047-201ENSMUST00000102405 104 ntBASIC-0.79□□□□□ -2.54
Ubfd1Q78JW9 Gm26051-201ENSMUST00000104642 93 ntBASIC-0.79□□□□□ -2.54
Ubfd1Q78JW9 Mir3101-201ENSMUST00000175607 88 ntBASIC-0.79□□□□□ -2.54
Ubfd1Q78JW9 Gm22679-201ENSMUST00000116975 100 ntBASIC-0.8□□□□□ -2.54
Ubfd1Q78JW9 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC-0.81□□□□□ -2.54
Ubfd1Q78JW9 Gm27784-201ENSMUST00000184926 113 ntBASIC-0.82□□□□□ -2.54
Ubfd1Q78JW9 CT030170.1-201ENSMUST00000222183 148 ntBASIC-0.82□□□□□ -2.54
Ubfd1Q78JW9 Gm23173-201ENSMUST00000157161 160 ntBASIC-0.83□□□□□ -2.54
Ubfd1Q78JW9 Gm22813-202ENSMUST00000200346 124 ntBASIC-0.83□□□□□ -2.54
Ubfd1Q78JW9 Gm44311-201ENSMUST00000196448 69 ntBASIC-0.84□□□□□ -2.54
Ubfd1Q78JW9 Gm23376-201ENSMUST00000082938 160 ntBASIC-0.84□□□□□ -2.54
Ubfd1Q78JW9 Gm24203-201ENSMUST00000082949 114 ntBASIC-0.84□□□□□ -2.54
Ubfd1Q78JW9 Gm25431-201ENSMUST00000101978 107 ntBASIC-0.85□□□□□ -2.55
Ubfd1Q78JW9 Mir297-1-201ENSMUST00000103800 76 ntBASIC-0.85□□□□□ -2.55
Ubfd1Q78JW9 Gm23817-201ENSMUST00000158449 104 ntBASIC-0.85□□□□□ -2.55
Ubfd1Q78JW9 Gm23477-201ENSMUST00000158882 128 ntBASIC-0.86□□□□□ -2.55
Ubfd1Q78JW9 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC-0.89□□□□□ -2.55
Ubfd1Q78JW9 Gm26233-201ENSMUST00000175530 70 ntBASIC-0.9□□□□□ -2.55
Ubfd1Q78JW9 Mir7231-201ENSMUST00000196252 61 ntBASIC-0.9□□□□□ -2.55
Ubfd1Q78JW9 Gm42773-201ENSMUST00000196962 148 ntBASIC-0.9□□□□□ -2.55
Ubfd1Q78JW9 Mir494-201ENSMUST00000093632 85 ntBASIC-0.9□□□□□ -2.55
Ubfd1Q78JW9 Gm20305-201ENSMUST00000193226 177 ntBASIC-0.91□□□□□ -2.56
Ubfd1Q78JW9 Gm26491-201ENSMUST00000179268 121 ntBASIC-0.92□□□□□ -2.56
Ubfd1Q78JW9 Gm27798-201ENSMUST00000184989 71 ntBASIC-0.92□□□□□ -2.56
Ubfd1Q78JW9 Gm22938-201ENSMUST00000103956 120 ntBASIC-0.93□□□□□ -2.56
Ubfd1Q78JW9 Gm25382-201ENSMUST00000157811 97 ntBASIC-0.93□□□□□ -2.56
Ubfd1Q78JW9 Mir677-202ENSMUST00000197076 78 ntBASIC-0.93□□□□□ -2.56
Ubfd1Q78JW9 Mir702-201ENSMUST00000102285 109 ntBASIC-0.94□□□□□ -2.56
Ubfd1Q78JW9 Mir1948-201ENSMUST00000157325 85 ntBASIC-0.94□□□□□ -2.56
Ubfd1Q78JW9 Gm23812-201ENSMUST00000175156 84 ntBASIC-0.94□□□□□ -2.56
Ubfd1Q78JW9 Gm23374-201ENSMUST00000175408 84 ntBASIC-0.94□□□□□ -2.56
Ubfd1Q78JW9 Gm23831-201ENSMUST00000158895 85 ntBASIC-0.95□□□□□ -2.56
Ubfd1Q78JW9 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-0.95□□□□□ -2.56
Ubfd1Q78JW9 Gm26131-201ENSMUST00000082725 110 ntBASIC-0.95□□□□□ -2.56
Ubfd1Q78JW9 Gm22717-201ENSMUST00000122703 171 ntBASIC-0.96□□□□□ -2.56
Ubfd1Q78JW9 Gm24714-201ENSMUST00000102382 101 ntBASIC-0.97□□□□□ -2.56
Ubfd1Q78JW9 Gm24378-201ENSMUST00000122699 106 ntBASIC-0.97□□□□□ -2.56
Ubfd1Q78JW9 Gm24108-201ENSMUST00000175495 77 ntBASIC-0.97□□□□□ -2.56
Ubfd1Q78JW9 Gm23607-201ENSMUST00000104550 126 ntBASIC-0.98□□□□□ -2.57
Ubfd1Q78JW9 Mir7094-2-201ENSMUST00000184622 60 ntBASIC-0.98□□□□□ -2.57
Ubfd1Q78JW9 Mir136-201ENSMUST00000199494 62 ntBASIC-0.98□□□□□ -2.57
Ubfd1Q78JW9 Mir7094-1-201ENSMUST00000199671 60 ntBASIC-0.98□□□□□ -2.57
Ubfd1Q78JW9 Snord57-201ENSMUST00000083338 72 ntBASIC-0.98□□□□□ -2.57
Ubfd1Q78JW9 Gm23856-201ENSMUST00000158380 99 ntBASIC-0.99□□□□□ -2.57
Ubfd1Q78JW9 Gm24197-201ENSMUST00000175085 109 ntBASIC-0.99□□□□□ -2.57
Ubfd1Q78JW9 Mir6964-201ENSMUST00000200252 59 ntBASIC-0.99□□□□□ -2.57
Ubfd1Q78JW9 Gm22013-201ENSMUST00000158788 103 ntBASIC-1□□□□□ -2.57
Ubfd1Q78JW9 Mir6961-201ENSMUST00000183874 67 ntBASIC-1□□□□□ -2.57
Ubfd1Q78JW9 Gm22095-201ENSMUST00000158984 150 ntBASIC-1.01□□□□□ -2.57
Ubfd1Q78JW9 Gm25652-201ENSMUST00000083780 103 ntBASIC-1.01□□□□□ -2.57
Ubfd1Q78JW9 Mir302c-201ENSMUST00000083548 68 ntBASIC-1.02□□□□□ -2.57
Ubfd1Q78JW9 Gm24704-201ENSMUST00000093715 107 ntBASIC-1.02□□□□□ -2.57
Ubfd1Q78JW9 Gm22305-201ENSMUST00000082690 108 ntBASIC-1.03□□□□□ -2.57
Ubfd1Q78JW9 Gm23240-201ENSMUST00000083009 121 ntBASIC-1.03□□□□□ -2.57
Ubfd1Q78JW9 Gm23072-201ENSMUST00000158243 123 ntBASIC-1.04□□□□□ -2.58
Ubfd1Q78JW9 Gm29344-201ENSMUST00000068143 210 ntBASIC-1.04□□□□□ -2.58
Ubfd1Q78JW9 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-1.05□□□□□ -2.58
Ubfd1Q78JW9 Gm19248-201ENSMUST00000209404 110 ntBASIC-1.05□□□□□ -2.58
Ubfd1Q78JW9 Gm26257-201ENSMUST00000122500 107 ntBASIC-1.06□□□□□ -2.58
Ubfd1Q78JW9 Gm24701-201ENSMUST00000101946 105 ntBASIC-1.07□□□□□ -2.58
Ubfd1Q78JW9 Gm24331-201ENSMUST00000175099 67 ntBASIC-1.07□□□□□ -2.58
Ubfd1Q78JW9 Gm23801-201ENSMUST00000175561 67 ntBASIC-1.07□□□□□ -2.58
Ubfd1Q78JW9 Gm24485-201ENSMUST00000178283 67 ntBASIC-1.07□□□□□ -2.58
Ubfd1Q78JW9 AC238676.2-201ENSMUST00000220910 94 ntBASIC-1.08□□□□□ -2.58
Ubfd1Q78JW9 Gm23293-201ENSMUST00000082552 104 ntBASIC-1.08□□□□□ -2.58
Ubfd1Q78JW9 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-1.08□□□□□ -2.58
Ubfd1Q78JW9 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-1.09□□□□□ -2.58
Ubfd1Q78JW9 Gm23904-201ENSMUST00000157567 124 ntBASIC-1.09□□□□□ -2.58
Ubfd1Q78JW9 Mir7057-201ENSMUST00000184685 58 ntBASIC-1.11□□□□□ -2.59
Ubfd1Q78JW9 Gm26485-201ENSMUST00000158019 64 ntBASIC-1.12□□□□□ -2.59
Ubfd1Q78JW9 Gm25225-201ENSMUST00000158197 102 ntBASIC-1.12□□□□□ -2.59
Ubfd1Q78JW9 Gm23199-201ENSMUST00000158812 107 ntBASIC-1.12□□□□□ -2.59
Ubfd1Q78JW9 Gm25087-201ENSMUST00000101992 78 ntBASIC-1.13□□□□□ -2.59
Ubfd1Q78JW9 Mir466l-201ENSMUST00000104866 121 ntBASIC-1.13□□□□□ -2.59
Ubfd1Q78JW9 Gm22016-201ENSMUST00000158793 114 ntBASIC-1.13□□□□□ -2.59
Ubfd1Q78JW9 Gm26467-201ENSMUST00000097257 78 ntBASIC-1.13□□□□□ -2.59
Ubfd1Q78JW9 Gm25158-201ENSMUST00000177681 121 ntBASIC-1.14□□□□□ -2.59
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms