Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 AC122327.1-201ENSMUST00000220778 108 ntBASIC-1.16□□□□□ -2.6
Trim38Q5SZ99 Gm26125-201ENSMUST00000083357 107 ntBASIC-1.16□□□□□ -2.6
Trim38Q5SZ99 Gm25609-201ENSMUST00000104019 104 ntBASIC-1.17□□□□□ -2.6
Trim38Q5SZ99 Gm24605-201ENSMUST00000104772 96 ntBASIC-1.17□□□□□ -2.6
Trim38Q5SZ99 Gm22539-201ENSMUST00000158167 117 ntBASIC-1.17□□□□□ -2.6
Trim38Q5SZ99 Gm23349-201ENSMUST00000158432 98 ntBASIC-1.18□□□□□ -2.6
Trim38Q5SZ99 Gm23335-201ENSMUST00000117021 90 ntBASIC-1.19□□□□□ -2.6
Trim38Q5SZ99 Gm23173-201ENSMUST00000157161 160 ntBASIC-1.19□□□□□ -2.6
Trim38Q5SZ99 Gm27415-201ENSMUST00000183720 95 ntBASIC-1.19□□□□□ -2.6
Trim38Q5SZ99 Gm22458-201ENSMUST00000082576 107 ntBASIC-1.19□□□□□ -2.6
Trim38Q5SZ99 Gm25289-201ENSMUST00000122799 119 ntBASIC-1.2□□□□□ -2.6
Trim38Q5SZ99 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-1.2□□□□□ -2.6
Trim38Q5SZ99 Gm23306-201ENSMUST00000179058 105 ntBASIC-1.21□□□□□ -2.6
Trim38Q5SZ99 Gm26466-201ENSMUST00000179615 79 ntBASIC-1.21□□□□□ -2.6
Trim38Q5SZ99 Gm23240-201ENSMUST00000083009 121 ntBASIC-1.21□□□□□ -2.6
Trim38Q5SZ99 Mir1948-201ENSMUST00000157325 85 ntBASIC-1.22□□□□□ -2.6
Trim38Q5SZ99 Gm26262-201ENSMUST00000158024 127 ntBASIC-1.22□□□□□ -2.6
Trim38Q5SZ99 Mir3083-201ENSMUST00000175377 64 ntBASIC-1.22□□□□□ -2.6
Trim38Q5SZ99 Gm43943-201ENSMUST00000204201 113 ntBASIC-1.23□□□□□ -2.61
Trim38Q5SZ99 Gm26499-201ENSMUST00000178544 79 ntBASIC-1.24□□□□□ -2.61
Trim38Q5SZ99 Gm26096-201ENSMUST00000179084 79 ntBASIC-1.24□□□□□ -2.61
Trim38Q5SZ99 Mir7218-201ENSMUST00000200050 59 ntBASIC-1.24□□□□□ -2.61
Trim38Q5SZ99 AC160962.3-201ENSMUST00000225914 112 ntBASIC-1.24□□□□□ -2.61
Trim38Q5SZ99 Gm24234-201ENSMUST00000104316 107 ntBASIC-1.25□□□□□ -2.61
Trim38Q5SZ99 Gm23909-201ENSMUST00000104598 131 ntBASIC-1.25□□□□□ -2.61
Trim38Q5SZ99 Gm24400-201ENSMUST00000157865 107 ntBASIC-1.25□□□□□ -2.61
Trim38Q5SZ99 Gm23421-201ENSMUST00000158934 104 ntBASIC-1.26□□□□□ -2.61
Trim38Q5SZ99 AC122335.1-201ENSMUST00000217587 175 ntBASIC-1.26□□□□□ -2.61
Trim38Q5SZ99 Gm24003-201ENSMUST00000158455 100 ntBASIC-1.27□□□□□ -2.61
Trim38Q5SZ99 Snord123-201ENSMUST00000158692 71 ntBASIC-1.27□□□□□ -2.61
Trim38Q5SZ99 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-1.27□□□□□ -2.61
Trim38Q5SZ99 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.27□□□□□ -2.61
Trim38Q5SZ99 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-1.27□□□□□ -2.61
Trim38Q5SZ99 Gm25158-201ENSMUST00000177681 121 ntBASIC-1.28□□□□□ -2.61
Trim38Q5SZ99 Gm26229-201ENSMUST00000179699 121 ntBASIC-1.28□□□□□ -2.61
Trim38Q5SZ99 Mir543-201ENSMUST00000102286 76 ntBASIC-1.29□□□□□ -2.62
Trim38Q5SZ99 Gm23644-201ENSMUST00000157856 77 ntBASIC-1.29□□□□□ -2.62
Trim38Q5SZ99 Gm22385-201ENSMUST00000158189 101 ntBASIC-1.29□□□□□ -2.62
Trim38Q5SZ99 Gm23369-201ENSMUST00000175406 105 ntBASIC-1.29□□□□□ -2.62
Trim38Q5SZ99 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-1.3□□□□□ -2.62
Trim38Q5SZ99 Gm25542-201ENSMUST00000116889 94 ntBASIC-1.3□□□□□ -2.62
Trim38Q5SZ99 Gm24650-201ENSMUST00000157105 103 ntBASIC-1.3□□□□□ -2.62
Trim38Q5SZ99 Gm24148-201ENSMUST00000082762 80 ntBASIC-1.3□□□□□ -2.62
Trim38Q5SZ99 Gm23244-201ENSMUST00000083375 92 ntBASIC-1.31□□□□□ -2.62
Trim38Q5SZ99 Gm25417-201ENSMUST00000104212 131 ntBASIC-1.32□□□□□ -2.62
Trim38Q5SZ99 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-1.32□□□□□ -2.62
Trim38Q5SZ99 Gm26104-201ENSMUST00000157250 108 ntBASIC-1.32□□□□□ -2.62
Trim38Q5SZ99 Gm24051-201ENSMUST00000158622 75 ntBASIC-1.32□□□□□ -2.62
Trim38Q5SZ99 Gm25380-201ENSMUST00000175463 107 ntBASIC-1.32□□□□□ -2.62
Trim38Q5SZ99 Gm24641-201ENSMUST00000178055 107 ntBASIC-1.32□□□□□ -2.62
Trim38Q5SZ99 Gm25484-201ENSMUST00000178217 107 ntBASIC-1.32□□□□□ -2.62
Trim38Q5SZ99 Gm26138-201ENSMUST00000179236 107 ntBASIC-1.32□□□□□ -2.62
Trim38Q5SZ99 Gm22821-201ENSMUST00000179288 107 ntBASIC-1.32□□□□□ -2.62
Trim38Q5SZ99 Gm23298-201ENSMUST00000083181 107 ntBASIC-1.32□□□□□ -2.62
Trim38Q5SZ99 Gm22057-201ENSMUST00000083387 107 ntBASIC-1.32□□□□□ -2.62
Trim38Q5SZ99 Gm25516-201ENSMUST00000083857 107 ntBASIC-1.32□□□□□ -2.62
Trim38Q5SZ99 Gm22354-201ENSMUST00000083919 70 ntBASIC-1.32□□□□□ -2.62
Trim38Q5SZ99 Gm24946-201ENSMUST00000158332 106 ntBASIC-1.33□□□□□ -2.62
Trim38Q5SZ99 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.33□□□□□ -2.62
Trim38Q5SZ99 Gm25644-201ENSMUST00000083209 107 ntBASIC-1.33□□□□□ -2.62
Trim38Q5SZ99 Gm22805-201ENSMUST00000082739 107 ntBASIC-1.34□□□□□ -2.62
Trim38Q5SZ99 Gm25854-201ENSMUST00000082792 72 ntBASIC-1.34□□□□□ -2.62
Trim38Q5SZ99 Gm24927-201ENSMUST00000083397 107 ntBASIC-1.34□□□□□ -2.62
Trim38Q5SZ99 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-1.35□□□□□ -2.63
Trim38Q5SZ99 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.35□□□□□ -2.63
Trim38Q5SZ99 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.35□□□□□ -2.63
Trim38Q5SZ99 Gm25798-201ENSMUST00000082641 107 ntBASIC-1.35□□□□□ -2.63
Trim38Q5SZ99 Gm22828-201ENSMUST00000083768 107 ntBASIC-1.35□□□□□ -2.63
Trim38Q5SZ99 Gm24988-201ENSMUST00000104460 121 ntBASIC-1.36□□□□□ -2.63
Trim38Q5SZ99 Gm25428-201ENSMUST00000157608 114 ntBASIC-1.36□□□□□ -2.63
Trim38Q5SZ99 Gm22381-201ENSMUST00000158186 107 ntBASIC-1.37□□□□□ -2.63
Trim38Q5SZ99 Gm25061-201ENSMUST00000104665 107 ntBASIC-1.38□□□□□ -2.63
Trim38Q5SZ99 Gm25862-201ENSMUST00000158250 129 ntBASIC-1.38□□□□□ -2.63
Trim38Q5SZ99 Gm23477-201ENSMUST00000158882 128 ntBASIC-1.38□□□□□ -2.63
Trim38Q5SZ99 Mir7231-201ENSMUST00000196252 61 ntBASIC-1.38□□□□□ -2.63
Trim38Q5SZ99 Gm25815-201ENSMUST00000082755 107 ntBASIC-1.38□□□□□ -2.63
Trim38Q5SZ99 Gm26051-201ENSMUST00000104642 93 ntBASIC-1.39□□□□□ -2.63
Trim38Q5SZ99 Gm22729-201ENSMUST00000158088 129 ntBASIC-1.39□□□□□ -2.63
Trim38Q5SZ99 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.4□□□□□ -2.63
Trim38Q5SZ99 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-1.41□□□□□ -2.64
Trim38Q5SZ99 CT030170.1-201ENSMUST00000222183 148 ntBASIC-1.41□□□□□ -2.64
Trim38Q5SZ99 Gm25987-201ENSMUST00000083234 107 ntBASIC-1.41□□□□□ -2.64
Trim38Q5SZ99 Gm11333-201ENSMUST00000119479 148 ntBASIC-1.42□□□□□ -2.64
Trim38Q5SZ99 Gm22566-201ENSMUST00000175541 85 ntBASIC-1.42□□□□□ -2.64
Trim38Q5SZ99 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-1.42□□□□□ -2.64
Trim38Q5SZ99 Gm25740-201ENSMUST00000180247 107 ntBASIC-1.42□□□□□ -2.64
Trim38Q5SZ99 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.42□□□□□ -2.64
Trim38Q5SZ99 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.43□□□□□ -2.64
Trim38Q5SZ99 Mir876-201ENSMUST00000104659 81 ntBASIC-1.44□□□□□ -2.64
Trim38Q5SZ99 Gm25847-201ENSMUST00000116793 96 ntBASIC-1.44□□□□□ -2.64
Trim38Q5SZ99 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.44□□□□□ -2.64
Trim38Q5SZ99 Gm23751-201ENSMUST00000157583 136 ntBASIC-1.44□□□□□ -2.64
Trim38Q5SZ99 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-1.45□□□□□ -2.64
Trim38Q5SZ99 Gm23590-201ENSMUST00000157661 104 ntBASIC-1.45□□□□□ -2.64
Trim38Q5SZ99 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.45□□□□□ -2.64
Trim38Q5SZ99 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.45□□□□□ -2.64
Trim38Q5SZ99 Mir450b-201ENSMUST00000102095 82 ntBASIC-1.46□□□□□ -2.64
Trim38Q5SZ99 Gm24612-201ENSMUST00000083267 107 ntBASIC-1.46□□□□□ -2.64
Trim38Q5SZ99 Mir494-201ENSMUST00000093632 85 ntBASIC-1.46□□□□□ -2.64
Trim38Q5SZ99 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.47□□□□□ -2.64
Retrieved 100 of 76,532 protein–RNA pairs in 243.1 ms