Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Mir702-201ENSMUST00000102285 109 ntBASIC-1.12□□□□□ -2.59
Shank3Q4ACU6 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.12□□□□□ -2.59
Shank3Q4ACU6 AC158537.2-201ENSMUST00000223575 150 ntBASIC-1.12□□□□□ -2.59
Shank3Q4ACU6 Gm23630-201ENSMUST00000175292 104 ntBASIC-1.14□□□□□ -2.59
Shank3Q4ACU6 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC-1.15□□□□□ -2.59
Shank3Q4ACU6 Gm26253-201ENSMUST00000122493 103 ntBASIC-1.15□□□□□ -2.59
Shank3Q4ACU6 Gm2077-201ENSMUST00000195017 319 ntBASIC-1.15□□□□□ -2.59
Shank3Q4ACU6 Mir7055-201ENSMUST00000197423 59 ntBASIC-1.15□□□□□ -2.59
Shank3Q4ACU6 Gm23613-201ENSMUST00000082596 87 ntBASIC-1.15□□□□□ -2.59
Shank3Q4ACU6 Gm23468-201ENSMUST00000157125 108 ntBASIC-1.15□□□□□ -2.59
Shank3Q4ACU6 Gm22842-201ENSMUST00000157709 118 ntBASIC-1.15□□□□□ -2.59
Shank3Q4ACU6 Gm26262-201ENSMUST00000158024 127 ntBASIC-1.15□□□□□ -2.59
Shank3Q4ACU6 Gm23308-201ENSMUST00000179475 107 ntBASIC-1.15□□□□□ -2.59
Shank3Q4ACU6 Snord57-201ENSMUST00000083338 72 ntBASIC-1.15□□□□□ -2.59
Shank3Q4ACU6 Gm23166-201ENSMUST00000157164 101 ntBASIC-1.16□□□□□ -2.6
Shank3Q4ACU6 Gm23590-201ENSMUST00000157661 104 ntBASIC-1.16□□□□□ -2.6
Shank3Q4ACU6 Gm24162-201ENSMUST00000093665 102 ntBASIC-1.16□□□□□ -2.6
Shank3Q4ACU6 Gm23607-201ENSMUST00000104550 126 ntBASIC-1.17□□□□□ -2.6
Shank3Q4ACU6 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-1.17□□□□□ -2.6
Shank3Q4ACU6 Snord16a-201ENSMUST00000083895 99 ntBASIC-1.17□□□□□ -2.6
Shank3Q4ACU6 Gm23644-201ENSMUST00000157856 77 ntBASIC-1.18□□□□□ -2.6
Shank3Q4ACU6 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-1.18□□□□□ -2.6
Shank3Q4ACU6 Gm22385-201ENSMUST00000158189 101 ntBASIC-1.18□□□□□ -2.6
Shank3Q4ACU6 Gm23244-201ENSMUST00000083375 92 ntBASIC-1.18□□□□□ -2.6
Shank3Q4ACU6 Gm27798-201ENSMUST00000184989 71 ntBASIC-1.19□□□□□ -2.6
Shank3Q4ACU6 Gm11333-201ENSMUST00000119479 148 ntBASIC-1.2□□□□□ -2.6
Shank3Q4ACU6 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.2□□□□□ -2.6
Shank3Q4ACU6 Mir6339-201ENSMUST00000185120 117 ntBASIC-1.2□□□□□ -2.6
Shank3Q4ACU6 Gm25854-201ENSMUST00000082792 72 ntBASIC-1.2□□□□□ -2.6
Shank3Q4ACU6 Gm24946-201ENSMUST00000158332 106 ntBASIC-1.2□□□□□ -2.6
Shank3Q4ACU6 Gm23240-201ENSMUST00000083009 121 ntBASIC-1.2□□□□□ -2.6
Shank3Q4ACU6 Gm25289-201ENSMUST00000122799 119 ntBASIC-1.21□□□□□ -2.6
Shank3Q4ACU6 Gm23199-201ENSMUST00000158812 107 ntBASIC-1.21□□□□□ -2.6
Shank3Q4ACU6 Gm22458-201ENSMUST00000082576 107 ntBASIC-1.21□□□□□ -2.6
Shank3Q4ACU6 Gm24492-201ENSMUST00000083798 107 ntBASIC-1.21□□□□□ -2.6
Shank3Q4ACU6 AC160962.3-201ENSMUST00000225914 112 ntBASIC-1.22□□□□□ -2.6
Shank3Q4ACU6 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.23□□□□□ -2.61
Shank3Q4ACU6 Gm26491-201ENSMUST00000179268 121 ntBASIC-1.23□□□□□ -2.61
Shank3Q4ACU6 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.23□□□□□ -2.61
Shank3Q4ACU6 Mir543-201ENSMUST00000102286 76 ntBASIC-1.24□□□□□ -2.61
Shank3Q4ACU6 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.24□□□□□ -2.61
Shank3Q4ACU6 Mir297b-201ENSMUST00000102268 109 ntBASIC-1.25□□□□□ -2.61
Shank3Q4ACU6 Gm24003-201ENSMUST00000158455 100 ntBASIC-1.25□□□□□ -2.61
Shank3Q4ACU6 Gm25380-201ENSMUST00000175463 107 ntBASIC-1.25□□□□□ -2.61
Shank3Q4ACU6 Gm24641-201ENSMUST00000178055 107 ntBASIC-1.25□□□□□ -2.61
Shank3Q4ACU6 Gm25484-201ENSMUST00000178217 107 ntBASIC-1.25□□□□□ -2.61
Shank3Q4ACU6 Gm26138-201ENSMUST00000179236 107 ntBASIC-1.25□□□□□ -2.61
Shank3Q4ACU6 Gm22821-201ENSMUST00000179288 107 ntBASIC-1.25□□□□□ -2.61
Shank3Q4ACU6 Mir7231-201ENSMUST00000196252 61 ntBASIC-1.25□□□□□ -2.61
Shank3Q4ACU6 Gm23298-201ENSMUST00000083181 107 ntBASIC-1.25□□□□□ -2.61
Shank3Q4ACU6 Gm22057-201ENSMUST00000083387 107 ntBASIC-1.25□□□□□ -2.61
Shank3Q4ACU6 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-1.25□□□□□ -2.61
Shank3Q4ACU6 Gm25516-201ENSMUST00000083857 107 ntBASIC-1.25□□□□□ -2.61
Shank3Q4ACU6 Gm43943-201ENSMUST00000204201 113 ntBASIC-1.26□□□□□ -2.61
Shank3Q4ACU6 Gm25158-201ENSMUST00000177681 121 ntBASIC-1.26□□□□□ -2.61
Shank3Q4ACU6 Gm26229-201ENSMUST00000179699 121 ntBASIC-1.26□□□□□ -2.61
Shank3Q4ACU6 Gm22828-201ENSMUST00000083768 107 ntBASIC-1.26□□□□□ -2.61
Shank3Q4ACU6 Gm25542-201ENSMUST00000116889 94 ntBASIC-1.27□□□□□ -2.61
Shank3Q4ACU6 Gm25740-201ENSMUST00000180247 107 ntBASIC-1.28□□□□□ -2.61
Shank3Q4ACU6 Gm25987-201ENSMUST00000083234 107 ntBASIC-1.28□□□□□ -2.61
Shank3Q4ACU6 Gm26125-201ENSMUST00000083357 107 ntBASIC-1.28□□□□□ -2.61
Shank3Q4ACU6 Mir15b-201ENSMUST00000083646 64 ntBASIC-1.29□□□□□ -2.62
Shank3Q4ACU6 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-1.29□□□□□ -2.62
Shank3Q4ACU6 Gm25644-201ENSMUST00000083209 107 ntBASIC-1.29□□□□□ -2.62
Shank3Q4ACU6 Gm24612-201ENSMUST00000083267 107 ntBASIC-1.29□□□□□ -2.62
Shank3Q4ACU6 Gm24148-201ENSMUST00000082762 80 ntBASIC-1.3□□□□□ -2.62
Shank3Q4ACU6 Gm24605-201ENSMUST00000104772 96 ntBASIC-1.31□□□□□ -2.62
Shank3Q4ACU6 Gm23306-201ENSMUST00000179058 105 ntBASIC-1.31□□□□□ -2.62
Shank3Q4ACU6 CT030170.1-201ENSMUST00000222183 148 ntBASIC-1.31□□□□□ -2.62
Shank3Q4ACU6 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-1.32□□□□□ -2.62
Shank3Q4ACU6 Gm23570-201ENSMUST00000083029 104 ntBASIC-1.32□□□□□ -2.62
Shank3Q4ACU6 Gm26375-201ENSMUST00000101829 106 ntBASIC-1.32□□□□□ -2.62
Shank3Q4ACU6 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.32□□□□□ -2.62
Shank3Q4ACU6 Gm23216-201ENSMUST00000179545 107 ntBASIC-1.32□□□□□ -2.62
Shank3Q4ACU6 Gm23909-201ENSMUST00000104598 131 ntBASIC-1.33□□□□□ -2.62
Shank3Q4ACU6 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-1.34□□□□□ -2.62
Shank3Q4ACU6 Gm24234-201ENSMUST00000104316 107 ntBASIC-1.35□□□□□ -2.63
Shank3Q4ACU6 Gm25112-201ENSMUST00000122680 104 ntBASIC-1.36□□□□□ -2.63
Shank3Q4ACU6 Gm22729-201ENSMUST00000158088 129 ntBASIC-1.36□□□□□ -2.63
Shank3Q4ACU6 Gm24988-201ENSMUST00000104460 121 ntBASIC-1.37□□□□□ -2.63
Shank3Q4ACU6 Gm22213-201ENSMUST00000157564 119 ntBASIC-1.37□□□□□ -2.63
Shank3Q4ACU6 Gm27987-201ENSMUST00000184023 93 ntBASIC-1.37□□□□□ -2.63
Shank3Q4ACU6 Gm26043-201ENSMUST00000116912 91 ntBASIC-1.37□□□□□ -2.63
Shank3Q4ACU6 Gm25428-201ENSMUST00000157608 114 ntBASIC-1.37□□□□□ -2.63
Shank3Q4ACU6 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-1.38□□□□□ -2.63
Shank3Q4ACU6 Gm25061-201ENSMUST00000104665 107 ntBASIC-1.38□□□□□ -2.63
Shank3Q4ACU6 Gm22381-201ENSMUST00000158186 107 ntBASIC-1.38□□□□□ -2.63
Shank3Q4ACU6 Snord123-201ENSMUST00000158692 71 ntBASIC-1.38□□□□□ -2.63
Shank3Q4ACU6 Gm23477-201ENSMUST00000158882 128 ntBASIC-1.38□□□□□ -2.63
Shank3Q4ACU6 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-1.38□□□□□ -2.63
Shank3Q4ACU6 Mir1950-201ENSMUST00000158526 74 ntBASIC-1.39□□□□□ -2.63
Shank3Q4ACU6 AC122335.1-201ENSMUST00000217587 175 ntBASIC-1.39□□□□□ -2.63
Shank3Q4ACU6 AC122210.2-201ENSMUST00000220216 115 ntBASIC-1.39□□□□□ -2.63
Shank3Q4ACU6 n-R5s155-201ENSMUST00000122531 113 ntBASIC-1.4□□□□□ -2.63
Shank3Q4ACU6 Gm22354-201ENSMUST00000083919 70 ntBASIC-1.4□□□□□ -2.63
Shank3Q4ACU6 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.41□□□□□ -2.64
Shank3Q4ACU6 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.41□□□□□ -2.64
Shank3Q4ACU6 Gm25815-201ENSMUST00000082755 107 ntBASIC-1.41□□□□□ -2.64
Shank3Q4ACU6 Mir297-1-201ENSMUST00000103800 76 ntBASIC-1.42□□□□□ -2.64
Shank3Q4ACU6 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.42□□□□□ -2.64
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms