Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm27987-201ENSMUST00000184023 93 ntBASIC-1.14□□□□□ -2.59
Trim40Q3UWA4 Gm44589-201ENSMUST00000207025 115 ntBASIC-1.14□□□□□ -2.59
Trim40Q3UWA4 Gm23240-201ENSMUST00000083009 121 ntBASIC-1.14□□□□□ -2.59
Trim40Q3UWA4 Gm22429-201ENSMUST00000158553 130 ntBASIC-1.15□□□□□ -2.59
Trim40Q3UWA4 CT030170.1-201ENSMUST00000222183 148 ntBASIC-1.15□□□□□ -2.59
Trim40Q3UWA4 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-1.16□□□□□ -2.6
Trim40Q3UWA4 Gm23072-201ENSMUST00000158243 123 ntBASIC-1.16□□□□□ -2.6
Trim40Q3UWA4 Gm24674-201ENSMUST00000179194 104 ntBASIC-1.16□□□□□ -2.6
Trim40Q3UWA4 Gm22251-201ENSMUST00000083216 107 ntBASIC-1.16□□□□□ -2.6
Trim40Q3UWA4 Mir1839-201ENSMUST00000175366 127 ntBASIC-1.17□□□□□ -2.6
Trim40Q3UWA4 Gm24108-201ENSMUST00000175495 77 ntBASIC-1.17□□□□□ -2.6
Trim40Q3UWA4 Mir7231-201ENSMUST00000196252 61 ntBASIC-1.17□□□□□ -2.6
Trim40Q3UWA4 AC122335.1-201ENSMUST00000217587 175 ntBASIC-1.17□□□□□ -2.6
Trim40Q3UWA4 Mir302c-201ENSMUST00000083548 68 ntBASIC-1.17□□□□□ -2.6
Trim40Q3UWA4 Gm23652-201ENSMUST00000116752 107 ntBASIC-1.18□□□□□ -2.6
Trim40Q3UWA4 Gm25712-201ENSMUST00000158634 93 ntBASIC-1.18□□□□□ -2.6
Trim40Q3UWA4 Mir7057-201ENSMUST00000184685 58 ntBASIC-1.18□□□□□ -2.6
Trim40Q3UWA4 Gm24296-201ENSMUST00000158297 106 ntBASIC-1.19□□□□□ -2.6
Trim40Q3UWA4 CT571266.1-201ENSMUST00000222859 153 ntBASIC-1.19□□□□□ -2.6
Trim40Q3UWA4 Mir3064-201ENSMUST00000175532 67 ntBASIC-1.2□□□□□ -2.6
Trim40Q3UWA4 Gm27610-201ENSMUST00000184026 74 ntBASIC-1.2□□□□□ -2.6
Trim40Q3UWA4 Gm44481-201ENSMUST00000197288 84 ntBASIC-1.2□□□□□ -2.6
Trim40Q3UWA4 Gm44339-201ENSMUST00000200598 84 ntBASIC-1.2□□□□□ -2.6
Trim40Q3UWA4 Mir7043-201ENSMUST00000184219 70 ntBASIC-1.21□□□□□ -2.6
Trim40Q3UWA4 Snord16a-201ENSMUST00000083895 99 ntBASIC-1.21□□□□□ -2.6
Trim40Q3UWA4 Gm22234-201ENSMUST00000174906 65 ntBASIC-1.22□□□□□ -2.6
Trim40Q3UWA4 Gm26491-201ENSMUST00000179268 121 ntBASIC-1.22□□□□□ -2.6
Trim40Q3UWA4 Snord57-201ENSMUST00000083338 72 ntBASIC-1.22□□□□□ -2.6
Trim40Q3UWA4 Gm23038-201ENSMUST00000083873 104 ntBASIC-1.22□□□□□ -2.6
Trim40Q3UWA4 Mir297-1-201ENSMUST00000103800 76 ntBASIC-1.23□□□□□ -2.61
Trim40Q3UWA4 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-1.24□□□□□ -2.61
Trim40Q3UWA4 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC-1.24□□□□□ -2.61
Trim40Q3UWA4 Gm22489-201ENSMUST00000116813 62 ntBASIC-1.24□□□□□ -2.61
Trim40Q3UWA4 Gm25158-201ENSMUST00000177681 121 ntBASIC-1.24□□□□□ -2.61
Trim40Q3UWA4 Gm26229-201ENSMUST00000179699 121 ntBASIC-1.24□□□□□ -2.61
Trim40Q3UWA4 Mir6957-201ENSMUST00000183708 64 ntBASIC-1.24□□□□□ -2.61
Trim40Q3UWA4 Mir145b-201ENSMUST00000184434 75 ntBASIC-1.24□□□□□ -2.61
Trim40Q3UWA4 Mir1950-201ENSMUST00000158526 74 ntBASIC-1.25□□□□□ -2.61
Trim40Q3UWA4 Gm23199-201ENSMUST00000158812 107 ntBASIC-1.25□□□□□ -2.61
Trim40Q3UWA4 Gm23308-201ENSMUST00000179475 107 ntBASIC-1.25□□□□□ -2.61
Trim40Q3UWA4 Gm23216-201ENSMUST00000179545 107 ntBASIC-1.25□□□□□ -2.61
Trim40Q3UWA4 Gm23909-201ENSMUST00000104598 131 ntBASIC-1.26□□□□□ -2.61
Trim40Q3UWA4 Snord50a-201ENSMUST00000178154 72 ntBASIC-1.27□□□□□ -2.61
Trim40Q3UWA4 Gm24463-201ENSMUST00000178417 72 ntBASIC-1.27□□□□□ -2.61
Trim40Q3UWA4 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-1.28□□□□□ -2.61
Trim40Q3UWA4 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC-1.28□□□□□ -2.61
Trim40Q3UWA4 Gm23166-201ENSMUST00000157164 101 ntBASIC-1.29□□□□□ -2.62
Trim40Q3UWA4 Gm23477-201ENSMUST00000158882 128 ntBASIC-1.29□□□□□ -2.62
Trim40Q3UWA4 Mir494-201ENSMUST00000093632 85 ntBASIC-1.29□□□□□ -2.62
Trim40Q3UWA4 Gm22717-201ENSMUST00000122703 171 ntBASIC-1.3□□□□□ -2.62
Trim40Q3UWA4 Gm26104-201ENSMUST00000157250 108 ntBASIC-1.3□□□□□ -2.62
Trim40Q3UWA4 Gm22950-201ENSMUST00000082776 107 ntBASIC-1.3□□□□□ -2.62
Trim40Q3UWA4 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-1.3□□□□□ -2.62
Trim40Q3UWA4 Mir6904-201ENSMUST00000183443 67 ntBASIC-1.31□□□□□ -2.62
Trim40Q3UWA4 Gm24495-201ENSMUST00000178575 79 ntBASIC-1.32□□□□□ -2.62
Trim40Q3UWA4 Gm22253-201ENSMUST00000179870 79 ntBASIC-1.32□□□□□ -2.62
Trim40Q3UWA4 Gm23376-201ENSMUST00000082938 160 ntBASIC-1.32□□□□□ -2.62
Trim40Q3UWA4 Mir7055-201ENSMUST00000197423 59 ntBASIC-1.33□□□□□ -2.62
Trim40Q3UWA4 Gm23630-201ENSMUST00000175292 104 ntBASIC-1.34□□□□□ -2.62
Trim40Q3UWA4 AC154832.1-201ENSMUST00000228928 141 ntBASIC-1.34□□□□□ -2.62
Trim40Q3UWA4 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-1.34□□□□□ -2.62
Trim40Q3UWA4 Mir574-201ENSMUST00000103854 78 ntBASIC-1.35□□□□□ -2.63
Trim40Q3UWA4 Gm24381-201ENSMUST00000122697 104 ntBASIC-1.35□□□□□ -2.63
Trim40Q3UWA4 Gm26262-201ENSMUST00000158024 127 ntBASIC-1.35□□□□□ -2.63
Trim40Q3UWA4 Gm25022-201ENSMUST00000102205 83 ntBASIC-1.36□□□□□ -2.63
Trim40Q3UWA4 Gm25108-201ENSMUST00000122473 78 ntBASIC-1.36□□□□□ -2.63
Trim40Q3UWA4 Mir467a-6-201ENSMUST00000177790 83 ntBASIC-1.36□□□□□ -2.63
Trim40Q3UWA4 Mir467a-3-201ENSMUST00000178082 83 ntBASIC-1.36□□□□□ -2.63
Trim40Q3UWA4 Mir467a-7-201ENSMUST00000178635 83 ntBASIC-1.36□□□□□ -2.63
Trim40Q3UWA4 Mir467a-10-201ENSMUST00000179320 83 ntBASIC-1.36□□□□□ -2.63
Trim40Q3UWA4 Mir467a-5-201ENSMUST00000179352 83 ntBASIC-1.36□□□□□ -2.63
Trim40Q3UWA4 Mir467a-2-201ENSMUST00000179447 83 ntBASIC-1.36□□□□□ -2.63
Trim40Q3UWA4 Mir467a-9-201ENSMUST00000179752 83 ntBASIC-1.36□□□□□ -2.63
Trim40Q3UWA4 Mir467a-4-201ENSMUST00000179923 83 ntBASIC-1.36□□□□□ -2.63
Trim40Q3UWA4 Mir467a-8-201ENSMUST00000180070 83 ntBASIC-1.36□□□□□ -2.63
Trim40Q3UWA4 Gm20305-201ENSMUST00000193226 177 ntBASIC-1.36□□□□□ -2.63
Trim40Q3UWA4 Gm44932-201ENSMUST00000206799 121 ntBASIC-1.36□□□□□ -2.63
Trim40Q3UWA4 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-1.36□□□□□ -2.63
Trim40Q3UWA4 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-1.37□□□□□ -2.63
Trim40Q3UWA4 Gm25087-201ENSMUST00000101992 78 ntBASIC-1.38□□□□□ -2.63
Trim40Q3UWA4 Gm24372-201ENSMUST00000104400 110 ntBASIC-1.38□□□□□ -2.63
Trim40Q3UWA4 Gm26467-201ENSMUST00000097257 78 ntBASIC-1.38□□□□□ -2.63
Trim40Q3UWA4 Gm23856-201ENSMUST00000158380 99 ntBASIC-1.39□□□□□ -2.63
Trim40Q3UWA4 Gm24003-201ENSMUST00000158455 100 ntBASIC-1.39□□□□□ -2.63
Trim40Q3UWA4 Gm22016-201ENSMUST00000158793 114 ntBASIC-1.39□□□□□ -2.63
Trim40Q3UWA4 Gm29344-201ENSMUST00000068143 210 ntBASIC-1.39□□□□□ -2.63
Trim40Q3UWA4 Gm23613-201ENSMUST00000082596 87 ntBASIC-1.39□□□□□ -2.63
Trim40Q3UWA4 Mir297b-201ENSMUST00000102268 109 ntBASIC-1.4□□□□□ -2.63
Trim40Q3UWA4 Mir466f-1-201ENSMUST00000104779 94 ntBASIC-1.4□□□□□ -2.63
Trim40Q3UWA4 Mir1187-201ENSMUST00000116936 122 ntBASIC-1.4□□□□□ -2.63
Trim40Q3UWA4 Gm43206-201ENSMUST00000197990 114 ntBASIC-1.41□□□□□ -2.64
Trim40Q3UWA4 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-1.41□□□□□ -2.64
Trim40Q3UWA4 Gm25681-201ENSMUST00000083938 106 ntBASIC-1.41□□□□□ -2.64
Trim40Q3UWA4 Gm25862-201ENSMUST00000158250 129 ntBASIC-1.42□□□□□ -2.64
Trim40Q3UWA4 Gm26257-201ENSMUST00000122500 107 ntBASIC-1.43□□□□□ -2.64
Trim40Q3UWA4 Gm24378-201ENSMUST00000122699 106 ntBASIC-1.44□□□□□ -2.64
Trim40Q3UWA4 Mir6964-201ENSMUST00000200252 59 ntBASIC-1.44□□□□□ -2.64
Trim40Q3UWA4 AC238676.2-201ENSMUST00000220910 94 ntBASIC-1.44□□□□□ -2.64
Trim40Q3UWA4 Gm26375-201ENSMUST00000101829 106 ntBASIC-1.45□□□□□ -2.64
Trim40Q3UWA4 Gm26043-201ENSMUST00000116912 91 ntBASIC-1.45□□□□□ -2.64
Retrieved 100 of 76,532 protein–RNA pairs in 142.3 ms