Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm27798-201ENSMUST00000184989 71 ntBASIC0.91□□□□□ -2.26
Col17a1Q07563 Mir33-201ENSMUST00000083531 69 ntBASIC0.91□□□□□ -2.26
Col17a1Q07563 Gm44345-201ENSMUST00000199560 135 ntBASIC0.9□□□□□ -2.27
Col17a1Q07563 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
Col17a1Q07563 DQ267101-201ENSMUST00000082562 73 ntBASIC0.89□□□□□ -2.27
Col17a1Q07563 Mir466f-1-201ENSMUST00000104779 94 ntBASIC0.88□□□□□ -2.27
Col17a1Q07563 Mir191-201ENSMUST00000196210 74 ntBASIC0.88□□□□□ -2.27
Col17a1Q07563 Mir7229-201ENSMUST00000197062 53 ntBASIC0.88□□□□□ -2.27
Col17a1Q07563 Gm20473-201ENSMUST00000173064 112 ntBASIC0.87□□□□□ -2.27
Col17a1Q07563 Gm23240-201ENSMUST00000083009 121 ntBASIC0.87□□□□□ -2.27
Col17a1Q07563 Mir363-201ENSMUST00000093598 75 ntBASIC0.87□□□□□ -2.27
Col17a1Q07563 Snord35a-201ENSMUST00000083884 90 ntBASIC0.86□□□□□ -2.27
Col17a1Q07563 Mir297b-201ENSMUST00000102268 109 ntBASIC0.86□□□□□ -2.27
Col17a1Q07563 Gm22232-201ENSMUST00000104654 94 ntBASIC0.86□□□□□ -2.27
Col17a1Q07563 Gm37832-201ENSMUST00000118935 189 ntBASIC0.86□□□□□ -2.27
Col17a1Q07563 Mir6364-201ENSMUST00000183396 86 ntBASIC0.86□□□□□ -2.27
Col17a1Q07563 Gm24194-201ENSMUST00000116805 90 ntBASIC0.85□□□□□ -2.27
Col17a1Q07563 Gm23992-201ENSMUST00000174981 67 ntBASIC0.85□□□□□ -2.27
Col17a1Q07563 Mir3105-201ENSMUST00000175480 85 ntBASIC0.85□□□□□ -2.27
Col17a1Q07563 Gm45617-201ENSMUST00000211132 209 ntBASIC0.85□□□□□ -2.27
Col17a1Q07563 Gm25158-201ENSMUST00000177681 121 ntBASIC0.84□□□□□ -2.28
Col17a1Q07563 Gm26229-201ENSMUST00000179699 121 ntBASIC0.84□□□□□ -2.28
Col17a1Q07563 Mir142b-201ENSMUST00000083486 115 ntBASIC0.84□□□□□ -2.28
Col17a1Q07563 Gm26484-201ENSMUST00000158018 106 ntBASIC0.81□□□□□ -2.28
Col17a1Q07563 Gm24678-201ENSMUST00000158756 104 ntBASIC0.8□□□□□ -2.28
Col17a1Q07563 Gm24884-201ENSMUST00000158784 119 ntBASIC0.8□□□□□ -2.28
Col17a1Q07563 Mir216a-201ENSMUST00000083605 72 ntBASIC0.8□□□□□ -2.28
Col17a1Q07563 Gm25903-201ENSMUST00000158492 103 ntBASIC0.8□□□□□ -2.28
Col17a1Q07563 Gm22981-201ENSMUST00000082611 75 ntBASIC0.8□□□□□ -2.28
Col17a1Q07563 Mir710-201ENSMUST00000102088 110 ntBASIC0.76□□□□□ -2.29
Col17a1Q07563 Gm22157-201ENSMUST00000158410 104 ntBASIC0.76□□□□□ -2.29
Col17a1Q07563 Mir695-201ENSMUST00000102261 109 ntBASIC0.75□□□□□ -2.29
Col17a1Q07563 Gm25408-201ENSMUST00000104104 133 ntBASIC0.75□□□□□ -2.29
Col17a1Q07563 Gm22335-201ENSMUST00000157724 99 ntBASIC0.75□□□□□ -2.29
Col17a1Q07563 Gm44803-201ENSMUST00000204384 156 ntBASIC0.75□□□□□ -2.29
Col17a1Q07563 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.75□□□□□ -2.29
Col17a1Q07563 Gm24047-201ENSMUST00000102405 104 ntBASIC0.74□□□□□ -2.29
Col17a1Q07563 Gm24903-201ENSMUST00000158131 126 ntBASIC0.74□□□□□ -2.29
Col17a1Q07563 Gm25596-201ENSMUST00000178368 107 ntBASIC0.74□□□□□ -2.29
Col17a1Q07563 Gm44457-201ENSMUST00000198109 76 ntBASIC0.74□□□□□ -2.29
Col17a1Q07563 Gm25791-201ENSMUST00000083292 137 ntBASIC0.74□□□□□ -2.29
Col17a1Q07563 Mirlet7d-201ENSMUST00000083519 103 ntBASIC0.74□□□□□ -2.29
Col17a1Q07563 Mir362-201ENSMUST00000093592 65 ntBASIC0.73□□□□□ -2.29
Col17a1Q07563 Gm23607-201ENSMUST00000104550 126 ntBASIC0.73□□□□□ -2.29
Col17a1Q07563 Mir1948-201ENSMUST00000157325 85 ntBASIC0.73□□□□□ -2.29
Col17a1Q07563 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.72□□□□□ -2.29
Col17a1Q07563 Gm27289-201ENSMUST00000183341 82 ntBASIC0.72□□□□□ -2.29
Col17a1Q07563 Mir3065-201ENSMUST00000198674 87 ntBASIC0.72□□□□□ -2.29
Col17a1Q07563 Gm23969-201ENSMUST00000083324 74 ntBASIC0.72□□□□□ -2.29
Col17a1Q07563 Gm27784-201ENSMUST00000184926 113 ntBASIC0.71□□□□□ -2.3
Col17a1Q07563 Gm37646-201ENSMUST00000191756 111 ntBASIC0.71□□□□□ -2.3
Col17a1Q07563 Mir18-201ENSMUST00000083469 96 ntBASIC0.71□□□□□ -2.3
Col17a1Q07563 Mir295-201ENSMUST00000104694 69 ntBASIC0.7□□□□□ -2.3
Col17a1Q07563 Gm24097-201ENSMUST00000178720 107 ntBASIC0.7□□□□□ -2.3
Col17a1Q07563 Mir7065-201ENSMUST00000185110 61 ntBASIC0.7□□□□□ -2.3
Col17a1Q07563 Gm37750-201ENSMUST00000193563 129 ntBASIC0.7□□□□□ -2.3
Col17a1Q07563 Snord33-201ENSMUST00000083694 84 ntBASIC0.7□□□□□ -2.3
Col17a1Q07563 Mir702-201ENSMUST00000102285 109 ntBASIC0.69□□□□□ -2.3
Col17a1Q07563 Mir670-201ENSMUST00000102380 100 ntBASIC0.69□□□□□ -2.3
Col17a1Q07563 Gm22962-201ENSMUST00000157962 73 ntBASIC0.69□□□□□ -2.3
Col17a1Q07563 Gm25862-201ENSMUST00000158250 129 ntBASIC0.69□□□□□ -2.3
Col17a1Q07563 Mir669m-2-201ENSMUST00000158355 98 ntBASIC0.69□□□□□ -2.3
Col17a1Q07563 Gm43432-201ENSMUST00000196352 121 ntBASIC0.68□□□□□ -2.3
Col17a1Q07563 Gm22925-201ENSMUST00000174956 102 ntBASIC0.66□□□□□ -2.3
Col17a1Q07563 Snord49b-201ENSMUST00000082503 72 ntBASIC0.66□□□□□ -2.3
Col17a1Q07563 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.65□□□□□ -2.31
Col17a1Q07563 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.65□□□□□ -2.31
Col17a1Q07563 Gm38208-201ENSMUST00000192476 114 ntBASIC0.64□□□□□ -2.31
Col17a1Q07563 Gm22759-201ENSMUST00000102276 96 ntBASIC0.63□□□□□ -2.31
Col17a1Q07563 Gm22838-201ENSMUST00000158437 99 ntBASIC0.63□□□□□ -2.31
Col17a1Q07563 Gm22239-201ENSMUST00000175220 103 ntBASIC0.63□□□□□ -2.31
Col17a1Q07563 Gm27749-201ENSMUST00000183651 125 ntBASIC0.63□□□□□ -2.31
Col17a1Q07563 Snord58b-201ENSMUST00000082937 66 ntBASIC0.63□□□□□ -2.31
Col17a1Q07563 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
Col17a1Q07563 Gm26116-201ENSMUST00000175600 77 ntBASIC0.62□□□□□ -2.31
Col17a1Q07563 Gm25431-201ENSMUST00000101978 107 ntBASIC0.61□□□□□ -2.31
Col17a1Q07563 Gm25388-201ENSMUST00000157339 151 ntBASIC0.61□□□□□ -2.31
Col17a1Q07563 Gm24296-201ENSMUST00000158297 106 ntBASIC0.61□□□□□ -2.31
Col17a1Q07563 Gm23125-201ENSMUST00000157651 106 ntBASIC0.61□□□□□ -2.31
Col17a1Q07563 Mir466q-201ENSMUST00000175249 76 ntBASIC0.6□□□□□ -2.31
Col17a1Q07563 Gm25023-201ENSMUST00000082977 107 ntBASIC0.6□□□□□ -2.31
Col17a1Q07563 Gm24963-201ENSMUST00000157916 144 ntBASIC0.58□□□□□ -2.32
Col17a1Q07563 Gm45541-201ENSMUST00000210443 54 ntBASIC0.58□□□□□ -2.32
Col17a1Q07563 Gm25049-201ENSMUST00000158597 73 ntBASIC0.57□□□□□ -2.32
Col17a1Q07563 Gm27735-201ENSMUST00000185085 76 ntBASIC0.56□□□□□ -2.32
Col17a1Q07563 Gm44303-201ENSMUST00000196348 83 ntBASIC0.55□□□□□ -2.32
Col17a1Q07563 Snord91a-201ENSMUST00000104305 93 ntBASIC0.54□□□□□ -2.32
Col17a1Q07563 Gm23909-201ENSMUST00000104598 131 ntBASIC0.54□□□□□ -2.32
Col17a1Q07563 AC154832.1-201ENSMUST00000228928 141 ntBASIC0.53□□□□□ -2.33
Col17a1Q07563 Gm25995-201ENSMUST00000175396 142 ntBASIC0.52□□□□□ -2.33
Col17a1Q07563 Mir327-201ENSMUST00000199328 69 ntBASIC0.52□□□□□ -2.33
Col17a1Q07563 Gm26303-201ENSMUST00000116845 119 ntBASIC0.51□□□□□ -2.33
Col17a1Q07563 Gm25510-201ENSMUST00000116986 123 ntBASIC0.51□□□□□ -2.33
Col17a1Q07563 Gm24843-201ENSMUST00000158682 76 ntBASIC0.5□□□□□ -2.33
Col17a1Q07563 Gm23159-201ENSMUST00000175088 77 ntBASIC0.5□□□□□ -2.33
Col17a1Q07563 Mir574-201ENSMUST00000103854 78 ntBASIC0.49□□□□□ -2.33
Col17a1Q07563 Mir344-2-201ENSMUST00000175446 80 ntBASIC0.49□□□□□ -2.33
Col17a1Q07563 Gm24971-201ENSMUST00000175581 110 ntBASIC0.49□□□□□ -2.33
Col17a1Q07563 Gm23442-201ENSMUST00000082919 134 ntBASIC0.49□□□□□ -2.33
Col17a1Q07563 Gm44347-201ENSMUST00000199602 108 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 277.9 ms