Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Gm23369-201ENSMUST00000175406 105 ntBASIC-1.55□□□□□ -2.66
Trim43bP86448 Gm26466-201ENSMUST00000179615 79 ntBASIC-1.55□□□□□ -2.66
Trim43bP86448 Gm22286-201ENSMUST00000179708 107 ntBASIC-1.55□□□□□ -2.66
Trim43bP86448 Mir7231-201ENSMUST00000196252 61 ntBASIC-1.55□□□□□ -2.66
Trim43bP86448 Gm22458-201ENSMUST00000082576 107 ntBASIC-1.55□□□□□ -2.66
Trim43bP86448 Gm23590-201ENSMUST00000157661 104 ntBASIC-1.56□□□□□ -2.66
Trim43bP86448 mt-Tf-201ENSMUST00000082387 68 ntBASIC-1.56□□□□□ -2.66
Trim43bP86448 Gm26454-201ENSMUST00000082682 107 ntBASIC-1.57□□□□□ -2.66
Trim43bP86448 Gm25862-201ENSMUST00000158250 129 ntBASIC-1.58□□□□□ -2.66
Trim43bP86448 Gm22429-201ENSMUST00000158553 130 ntBASIC-1.58□□□□□ -2.66
Trim43bP86448 Gm25542-201ENSMUST00000116889 94 ntBASIC-1.59□□□□□ -2.66
Trim43bP86448 Gm25429-201ENSMUST00000157607 132 ntBASIC-1.59□□□□□ -2.66
Trim43bP86448 Gm22004-201ENSMUST00000101884 107 ntBASIC-1.6□□□□□ -2.67
Trim43bP86448 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-1.6□□□□□ -2.67
Trim43bP86448 Gm23578-201ENSMUST00000103943 104 ntBASIC-1.61□□□□□ -2.67
Trim43bP86448 Mir876-201ENSMUST00000104659 81 ntBASIC-1.61□□□□□ -2.67
Trim43bP86448 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.61□□□□□ -2.67
Trim43bP86448 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-1.61□□□□□ -2.67
Trim43bP86448 CT030170.1-201ENSMUST00000222183 148 ntBASIC-1.61□□□□□ -2.67
Trim43bP86448 Mir3083-201ENSMUST00000175377 64 ntBASIC-1.62□□□□□ -2.67
Trim43bP86448 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-1.62□□□□□ -2.67
Trim43bP86448 Snord57-201ENSMUST00000083338 72 ntBASIC-1.62□□□□□ -2.67
Trim43bP86448 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.63□□□□□ -2.67
Trim43bP86448 Gm25289-201ENSMUST00000122799 119 ntBASIC-1.63□□□□□ -2.67
Trim43bP86448 AC122335.1-201ENSMUST00000217587 175 ntBASIC-1.63□□□□□ -2.67
Trim43bP86448 Gm24459-201ENSMUST00000082730 86 ntBASIC-1.63□□□□□ -2.67
Trim43bP86448 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.64□□□□□ -2.67
Trim43bP86448 Gm23966-201ENSMUST00000179823 107 ntBASIC-1.64□□□□□ -2.67
Trim43bP86448 Gm25854-201ENSMUST00000082792 72 ntBASIC-1.64□□□□□ -2.67
Trim43bP86448 Gm24203-201ENSMUST00000082949 114 ntBASIC-1.64□□□□□ -2.67
Trim43bP86448 Gm25644-201ENSMUST00000083209 107 ntBASIC-1.64□□□□□ -2.67
Trim43bP86448 Mir15b-201ENSMUST00000083646 64 ntBASIC-1.64□□□□□ -2.67
Trim43bP86448 Gm22446-201ENSMUST00000180108 104 ntBASIC-1.65□□□□□ -2.67
Trim43bP86448 AL929417.1-201ENSMUST00000214901 124 ntBASIC-1.65□□□□□ -2.67
Trim43bP86448 Gm24612-201ENSMUST00000083267 107 ntBASIC-1.65□□□□□ -2.67
Trim43bP86448 Gm11333-201ENSMUST00000119479 148 ntBASIC-1.66□□□□□ -2.68
Trim43bP86448 Gm2077-201ENSMUST00000195017 319 ntBASIC-1.66□□□□□ -2.68
Trim43bP86448 Gm24492-201ENSMUST00000083798 107 ntBASIC-1.66□□□□□ -2.68
Trim43bP86448 Gm23350-201ENSMUST00000158429 103 ntBASIC-1.68□□□□□ -2.68
Trim43bP86448 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.68□□□□□ -2.68
Trim43bP86448 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.68□□□□□ -2.68
Trim43bP86448 Mir494-201ENSMUST00000093632 85 ntBASIC-1.68□□□□□ -2.68
Trim43bP86448 Gm24988-201ENSMUST00000104460 121 ntBASIC-1.69□□□□□ -2.68
Trim43bP86448 Gm25740-201ENSMUST00000180247 107 ntBASIC-1.69□□□□□ -2.68
Trim43bP86448 AC161271.1-201ENSMUST00000226914 150 ntBASIC-1.69□□□□□ -2.68
Trim43bP86448 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-1.69□□□□□ -2.68
Trim43bP86448 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.7□□□□□ -2.68
Trim43bP86448 Gm25061-201ENSMUST00000104665 107 ntBASIC-1.71□□□□□ -2.68
Trim43bP86448 Gm24167-201ENSMUST00000177733 124 ntBASIC-1.71□□□□□ -2.68
Trim43bP86448 Gm24028-201ENSMUST00000178991 124 ntBASIC-1.71□□□□□ -2.68
Trim43bP86448 Mir297a-2-201ENSMUST00000103795 90 ntBASIC-1.72□□□□□ -2.68
Trim43bP86448 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.72□□□□□ -2.68
Trim43bP86448 AC160962.3-201ENSMUST00000225914 112 ntBASIC-1.72□□□□□ -2.68
Trim43bP86448 Gm24705-201ENSMUST00000082808 107 ntBASIC-1.72□□□□□ -2.68
Trim43bP86448 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.73□□□□□ -2.69
Trim43bP86448 Gm26491-201ENSMUST00000179268 121 ntBASIC-1.73□□□□□ -2.69
Trim43bP86448 Gm23244-201ENSMUST00000083375 92 ntBASIC-1.73□□□□□ -2.69
Trim43bP86448 Gm22354-201ENSMUST00000083919 70 ntBASIC-1.74□□□□□ -2.69
Trim43bP86448 Gm23477-201ENSMUST00000158882 128 ntBASIC-1.75□□□□□ -2.69
Trim43bP86448 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.75□□□□□ -2.69
Trim43bP86448 Gm25087-201ENSMUST00000101992 78 ntBASIC-1.76□□□□□ -2.69
Trim43bP86448 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-1.76□□□□□ -2.69
Trim43bP86448 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.76□□□□□ -2.69
Trim43bP86448 Gm26467-201ENSMUST00000097257 78 ntBASIC-1.76□□□□□ -2.69
Trim43bP86448 Gm20734-201ENSMUST00000216939 193 ntBASIC-1.77□□□□□ -2.69
Trim43bP86448 Gm22213-201ENSMUST00000157564 119 ntBASIC-1.78□□□□□ -2.69
Trim43bP86448 Gm26104-201ENSMUST00000157250 108 ntBASIC-1.79□□□□□ -2.7
Trim43bP86448 Mir3064-201ENSMUST00000175532 67 ntBASIC-1.79□□□□□ -2.7
Trim43bP86448 Gm23570-201ENSMUST00000083029 104 ntBASIC-1.79□□□□□ -2.7
Trim43bP86448 Mir297-1-201ENSMUST00000103800 76 ntBASIC-1.8□□□□□ -2.7
Trim43bP86448 AC122210.2-201ENSMUST00000220216 115 ntBASIC-1.8□□□□□ -2.7
Trim43bP86448 Gm24234-201ENSMUST00000104316 107 ntBASIC-1.81□□□□□ -2.7
Trim43bP86448 Gm22717-201ENSMUST00000122703 171 ntBASIC-1.81□□□□□ -2.7
Trim43bP86448 Gm26375-201ENSMUST00000101829 106 ntBASIC-1.82□□□□□ -2.7
Trim43bP86448 Gm24673-201ENSMUST00000116948 124 ntBASIC-1.82□□□□□ -2.7
Trim43bP86448 Gm22842-201ENSMUST00000157709 118 ntBASIC-1.82□□□□□ -2.7
Trim43bP86448 Gm23644-201ENSMUST00000157856 77 ntBASIC-1.82□□□□□ -2.7
Trim43bP86448 Gm25380-201ENSMUST00000175463 107 ntBASIC-1.82□□□□□ -2.7
Trim43bP86448 Gm24641-201ENSMUST00000178055 107 ntBASIC-1.82□□□□□ -2.7
Trim43bP86448 Gm25484-201ENSMUST00000178217 107 ntBASIC-1.82□□□□□ -2.7
Trim43bP86448 Gm23108-201ENSMUST00000178295 124 ntBASIC-1.82□□□□□ -2.7
Trim43bP86448 Gm26138-201ENSMUST00000179236 107 ntBASIC-1.82□□□□□ -2.7
Trim43bP86448 Gm22821-201ENSMUST00000179288 107 ntBASIC-1.82□□□□□ -2.7
Trim43bP86448 Gm23678-201ENSMUST00000083157 107 ntBASIC-1.82□□□□□ -2.7
Trim43bP86448 Gm23298-201ENSMUST00000083181 107 ntBASIC-1.82□□□□□ -2.7
Trim43bP86448 Gm22057-201ENSMUST00000083387 107 ntBASIC-1.82□□□□□ -2.7
Trim43bP86448 Gm25516-201ENSMUST00000083857 107 ntBASIC-1.82□□□□□ -2.7
Trim43bP86448 Gm25326-201ENSMUST00000101903 107 ntBASIC-1.84□□□□□ -2.7
Trim43bP86448 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC-1.84□□□□□ -2.7
Trim43bP86448 Gm22729-201ENSMUST00000158088 129 ntBASIC-1.84□□□□□ -2.7
Trim43bP86448 Mir7086-201ENSMUST00000183683 65 ntBASIC-1.84□□□□□ -2.7
Trim43bP86448 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.84□□□□□ -2.7
Trim43bP86448 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.84□□□□□ -2.7
Trim43bP86448 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC-1.85□□□□□ -2.71
Trim43bP86448 Gm24605-201ENSMUST00000104772 96 ntBASIC-1.86□□□□□ -2.71
Trim43bP86448 Gm23573-201ENSMUST00000104408 107 ntBASIC-1.87□□□□□ -2.71
Trim43bP86448 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.87□□□□□ -2.71
Trim43bP86448 Gm25995-201ENSMUST00000175396 142 ntBASIC-1.87□□□□□ -2.71
Trim43bP86448 Gm25112-201ENSMUST00000122680 104 ntBASIC-1.88□□□□□ -2.71
Trim43bP86448 Gm24674-201ENSMUST00000179194 104 ntBASIC-1.88□□□□□ -2.71
Retrieved 100 of 76,532 protein–RNA pairs in 143.3 ms