Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 AC158537.2-201ENSMUST00000223575 150 ntBASIC-0.86□□□□□ -2.55
Sox3P53784 Gm24148-201ENSMUST00000082762 80 ntBASIC-0.86□□□□□ -2.55
Sox3P53784 Gm23607-201ENSMUST00000104550 126 ntBASIC-0.87□□□□□ -2.55
Sox3P53784 Gm25847-201ENSMUST00000116793 96 ntBASIC-0.87□□□□□ -2.55
Sox3P53784 Gm24400-201ENSMUST00000157865 107 ntBASIC-0.87□□□□□ -2.55
Sox3P53784 Gm25225-201ENSMUST00000158197 102 ntBASIC-0.87□□□□□ -2.55
Sox3P53784 Gm23653-201ENSMUST00000116751 97 ntBASIC-0.88□□□□□ -2.55
Sox3P53784 Mir1948-201ENSMUST00000157325 85 ntBASIC-0.88□□□□□ -2.55
Sox3P53784 Gm24108-201ENSMUST00000175495 77 ntBASIC-0.88□□□□□ -2.55
Sox3P53784 Gm22305-201ENSMUST00000082690 108 ntBASIC-0.89□□□□□ -2.55
Sox3P53784 Gm24459-201ENSMUST00000082730 86 ntBASIC-0.89□□□□□ -2.55
Sox3P53784 Gm24203-201ENSMUST00000082949 114 ntBASIC-0.89□□□□□ -2.55
Sox3P53784 Mir302c-201ENSMUST00000083548 68 ntBASIC-0.89□□□□□ -2.55
Sox3P53784 Mir702-201ENSMUST00000102285 109 ntBASIC-0.9□□□□□ -2.55
Sox3P53784 Gm25542-201ENSMUST00000116889 94 ntBASIC-0.9□□□□□ -2.55
Sox3P53784 Gm22213-201ENSMUST00000157564 119 ntBASIC-0.9□□□□□ -2.55
Sox3P53784 Mir7086-201ENSMUST00000183683 65 ntBASIC-0.9□□□□□ -2.55
Sox3P53784 Gm22828-201ENSMUST00000083768 107 ntBASIC-0.9□□□□□ -2.55
Sox3P53784 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-0.91□□□□□ -2.56
Sox3P53784 Gm23308-201ENSMUST00000179475 107 ntBASIC-0.91□□□□□ -2.56
Sox3P53784 Gm22458-201ENSMUST00000082576 107 ntBASIC-0.91□□□□□ -2.56
Sox3P53784 Gm25987-201ENSMUST00000083234 107 ntBASIC-0.91□□□□□ -2.56
Sox3P53784 Gm23173-201ENSMUST00000157161 160 ntBASIC-0.92□□□□□ -2.56
Sox3P53784 Gm23590-201ENSMUST00000157661 104 ntBASIC-0.93□□□□□ -2.56
Sox3P53784 Gm24554-201ENSMUST00000158654 73 ntBASIC-0.93□□□□□ -2.56
Sox3P53784 Gm23306-201ENSMUST00000179058 105 ntBASIC-0.93□□□□□ -2.56
Sox3P53784 Gm25740-201ENSMUST00000180247 107 ntBASIC-0.93□□□□□ -2.56
Sox3P53784 Mir7057-201ENSMUST00000184685 58 ntBASIC-0.93□□□□□ -2.56
Sox3P53784 Mir7015-201ENSMUST00000199525 64 ntBASIC-0.93□□□□□ -2.56
Sox3P53784 Gm44589-201ENSMUST00000207025 115 ntBASIC-0.93□□□□□ -2.56
Sox3P53784 Gm25644-201ENSMUST00000083209 107 ntBASIC-0.93□□□□□ -2.56
Sox3P53784 Gm24946-201ENSMUST00000158332 106 ntBASIC-0.94□□□□□ -2.56
Sox3P53784 Gm22354-201ENSMUST00000083919 70 ntBASIC-0.94□□□□□ -2.56
Sox3P53784 Gm27798-201ENSMUST00000184989 71 ntBASIC-0.95□□□□□ -2.56
Sox3P53784 Gm25854-201ENSMUST00000082792 72 ntBASIC-0.95□□□□□ -2.56
Sox3P53784 Mir876-201ENSMUST00000104659 81 ntBASIC-0.96□□□□□ -2.56
Sox3P53784 Gm25815-201ENSMUST00000082755 107 ntBASIC-0.96□□□□□ -2.56
Sox3P53784 Gm24701-201ENSMUST00000101946 105 ntBASIC-0.97□□□□□ -2.56
Sox3P53784 Gm25417-201ENSMUST00000104212 131 ntBASIC-0.98□□□□□ -2.57
Sox3P53784 Gm25601-201ENSMUST00000158356 105 ntBASIC-0.98□□□□□ -2.57
Sox3P53784 Mir1839-201ENSMUST00000175366 127 ntBASIC-0.98□□□□□ -2.57
Sox3P53784 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-0.98□□□□□ -2.57
Sox3P53784 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-0.98□□□□□ -2.57
Sox3P53784 Gm26125-201ENSMUST00000083357 107 ntBASIC-0.98□□□□□ -2.57
Sox3P53784 Gm25061-201ENSMUST00000104665 107 ntBASIC-0.99□□□□□ -2.57
Sox3P53784 Gm11333-201ENSMUST00000119479 148 ntBASIC-0.99□□□□□ -2.57
Sox3P53784 Gm23240-201ENSMUST00000083009 121 ntBASIC-0.99□□□□□ -2.57
Sox3P53784 Gm25712-201ENSMUST00000158634 93 ntBASIC-1□□□□□ -2.57
Sox3P53784 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-1□□□□□ -2.57
Sox3P53784 Gm22729-201ENSMUST00000158088 129 ntBASIC-1.01□□□□□ -2.57
Sox3P53784 Gm26491-201ENSMUST00000179268 121 ntBASIC-1.01□□□□□ -2.57
Sox3P53784 Snord57-201ENSMUST00000083338 72 ntBASIC-1.01□□□□□ -2.57
Sox3P53784 Mir15b-201ENSMUST00000083646 64 ntBASIC-1.01□□□□□ -2.57
Sox3P53784 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.02□□□□□ -2.57
Sox3P53784 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.02□□□□□ -2.57
Sox3P53784 Mir450b-201ENSMUST00000102095 82 ntBASIC-1.03□□□□□ -2.57
Sox3P53784 Mir297b-201ENSMUST00000102268 109 ntBASIC-1.03□□□□□ -2.57
Sox3P53784 Gm24988-201ENSMUST00000104460 121 ntBASIC-1.04□□□□□ -2.58
Sox3P53784 Gm24586-201ENSMUST00000116695 89 ntBASIC-1.04□□□□□ -2.58
Sox3P53784 Gm23166-201ENSMUST00000157164 101 ntBASIC-1.04□□□□□ -2.58
Sox3P53784 Gm25158-201ENSMUST00000177681 121 ntBASIC-1.04□□□□□ -2.58
Sox3P53784 Gm26229-201ENSMUST00000179699 121 ntBASIC-1.04□□□□□ -2.58
Sox3P53784 Mir6957-201ENSMUST00000183708 64 ntBASIC-1.04□□□□□ -2.58
Sox3P53784 Gm23570-201ENSMUST00000083029 104 ntBASIC-1.04□□□□□ -2.58
Sox3P53784 Snord16a-201ENSMUST00000083895 99 ntBASIC-1.04□□□□□ -2.58
Sox3P53784 Gm22845-201ENSMUST00000157712 104 ntBASIC-1.05□□□□□ -2.58
Sox3P53784 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.05□□□□□ -2.58
Sox3P53784 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.06□□□□□ -2.58
Sox3P53784 Gm43943-201ENSMUST00000204201 113 ntBASIC-1.06□□□□□ -2.58
Sox3P53784 CT030170.1-201ENSMUST00000222183 148 ntBASIC-1.06□□□□□ -2.58
Sox3P53784 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-1.07□□□□□ -2.58
Sox3P53784 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-1.07□□□□□ -2.58
Sox3P53784 Mir7231-201ENSMUST00000196252 61 ntBASIC-1.07□□□□□ -2.58
Sox3P53784 AC122335.1-201ENSMUST00000217587 175 ntBASIC-1.07□□□□□ -2.58
Sox3P53784 Gm25112-201ENSMUST00000122680 104 ntBASIC-1.08□□□□□ -2.58
Sox3P53784 Gm23630-201ENSMUST00000175292 104 ntBASIC-1.08□□□□□ -2.58
Sox3P53784 Gm27987-201ENSMUST00000184023 93 ntBASIC-1.08□□□□□ -2.58
Sox3P53784 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-1.08□□□□□ -2.58
Sox3P53784 Gm24725-201ENSMUST00000158229 125 ntBASIC-1.09□□□□□ -2.58
Sox3P53784 Mir7218-201ENSMUST00000200050 59 ntBASIC-1.09□□□□□ -2.58
Sox3P53784 Gm26104-201ENSMUST00000157250 108 ntBASIC-1.1□□□□□ -2.59
Sox3P53784 Gm23421-201ENSMUST00000158934 104 ntBASIC-1.1□□□□□ -2.59
Sox3P53784 Gm44385-201ENSMUST00000198781 81 ntBASIC-1.1□□□□□ -2.59
Sox3P53784 Mir543-201ENSMUST00000102286 76 ntBASIC-1.11□□□□□ -2.59
Sox3P53784 Gm24482-201ENSMUST00000117005 93 ntBASIC-1.11□□□□□ -2.59
Sox3P53784 Mir297-1-201ENSMUST00000103800 76 ntBASIC-1.12□□□□□ -2.59
Sox3P53784 Gm26262-201ENSMUST00000158024 127 ntBASIC-1.12□□□□□ -2.59
Sox3P53784 Gm22805-201ENSMUST00000082739 107 ntBASIC-1.12□□□□□ -2.59
Sox3P53784 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-1.12□□□□□ -2.59
Sox3P53784 Gm23909-201ENSMUST00000104598 131 ntBASIC-1.13□□□□□ -2.59
Sox3P53784 Mir3064-201ENSMUST00000175532 67 ntBASIC-1.13□□□□□ -2.59
Sox3P53784 Gm22385-201ENSMUST00000158189 101 ntBASIC-1.14□□□□□ -2.59
Sox3P53784 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.14□□□□□ -2.59
Sox3P53784 Gm24674-201ENSMUST00000179194 104 ntBASIC-1.14□□□□□ -2.59
Sox3P53784 Gm24410-201ENSMUST00000083433 107 ntBASIC-1.14□□□□□ -2.59
Sox3P53784 Gm23477-201ENSMUST00000158882 128 ntBASIC-1.15□□□□□ -2.59
Sox3P53784 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC-1.15□□□□□ -2.59
Sox3P53784 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-1.15□□□□□ -2.59
Sox3P53784 Gm22717-201ENSMUST00000122703 171 ntBASIC-1.16□□□□□ -2.6
Sox3P53784 Gm22251-201ENSMUST00000083216 107 ntBASIC-1.16□□□□□ -2.6
Retrieved 100 of 76,532 protein–RNA pairs in 1923.8 ms