Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Mir467a-8-201ENSMUST00000180070 83 ntBASIC-0.58□□□□□ -2.5
Ercc3P49135 Gm26131-201ENSMUST00000082725 110 ntBASIC-0.58□□□□□ -2.5
Ercc3P49135 Gm22539-201ENSMUST00000158167 117 ntBASIC-0.59□□□□□ -2.5
Ercc3P49135 Gm24377-201ENSMUST00000104398 131 ntBASIC-0.6□□□□□ -2.51
Ercc3P49135 Gm11333-201ENSMUST00000119479 148 ntBASIC-0.6□□□□□ -2.51
Ercc3P49135 Gm24296-201ENSMUST00000158297 106 ntBASIC-0.6□□□□□ -2.51
Ercc3P49135 Gm22157-201ENSMUST00000158410 104 ntBASIC-0.6□□□□□ -2.51
Ercc3P49135 Gm25472-201ENSMUST00000175454 78 ntBASIC-0.6□□□□□ -2.51
Ercc3P49135 AC167019.1-201ENSMUST00000227913 106 ntBASIC-0.6□□□□□ -2.51
Ercc3P49135 Mir6961-201ENSMUST00000183874 67 ntBASIC-0.61□□□□□ -2.51
Ercc3P49135 Gm27987-201ENSMUST00000184023 93 ntBASIC-0.61□□□□□ -2.51
Ercc3P49135 Mir96-201ENSMUST00000083652 106 ntBASIC-0.61□□□□□ -2.51
Ercc3P49135 Gm25431-201ENSMUST00000101978 107 ntBASIC-0.62□□□□□ -2.51
Ercc3P49135 Gm24197-201ENSMUST00000175085 109 ntBASIC-0.62□□□□□ -2.51
Ercc3P49135 Gm24674-201ENSMUST00000179194 104 ntBASIC-0.62□□□□□ -2.51
Ercc3P49135 AC154832.1-201ENSMUST00000228928 141 ntBASIC-0.62□□□□□ -2.51
Ercc3P49135 Gm22298-201ENSMUST00000082662 133 ntBASIC-0.62□□□□□ -2.51
Ercc3P49135 Gm26043-201ENSMUST00000116912 91 ntBASIC-0.63□□□□□ -2.51
Ercc3P49135 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-0.63□□□□□ -2.51
Ercc3P49135 Mir7094-2-201ENSMUST00000184622 60 ntBASIC-0.63□□□□□ -2.51
Ercc3P49135 Mir7094-1-201ENSMUST00000199671 60 ntBASIC-0.63□□□□□ -2.51
Ercc3P49135 Mir6964-201ENSMUST00000200252 59 ntBASIC-0.63□□□□□ -2.51
Ercc3P49135 Gm23570-201ENSMUST00000083029 104 ntBASIC-0.63□□□□□ -2.51
Ercc3P49135 Gm25429-201ENSMUST00000157607 132 ntBASIC-0.64□□□□□ -2.51
Ercc3P49135 Gm24400-201ENSMUST00000157865 107 ntBASIC-0.64□□□□□ -2.51
Ercc3P49135 Gm22016-201ENSMUST00000158793 114 ntBASIC-0.64□□□□□ -2.51
Ercc3P49135 Gm26233-201ENSMUST00000175530 70 ntBASIC-0.64□□□□□ -2.51
Ercc3P49135 Mir876-201ENSMUST00000104659 81 ntBASIC-0.65□□□□□ -2.51
Ercc3P49135 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-0.65□□□□□ -2.51
Ercc3P49135 AC122335.1-201ENSMUST00000217587 175 ntBASIC-0.65□□□□□ -2.51
Ercc3P49135 Gm24946-201ENSMUST00000158332 106 ntBASIC-0.66□□□□□ -2.52
Ercc3P49135 Mir5124b-201ENSMUST00000184251 85 ntBASIC-0.66□□□□□ -2.52
Ercc3P49135 Gm25652-201ENSMUST00000083780 103 ntBASIC-0.66□□□□□ -2.52
Ercc3P49135 Mir7055-201ENSMUST00000197423 59 ntBASIC-0.67□□□□□ -2.52
Ercc3P49135 Gm37832-201ENSMUST00000118935 189 ntBASIC-0.68□□□□□ -2.52
Ercc3P49135 Gm23955-201ENSMUST00000157214 100 ntBASIC-0.69□□□□□ -2.52
Ercc3P49135 Mir1950-201ENSMUST00000158526 74 ntBASIC-0.69□□□□□ -2.52
Ercc3P49135 Gm23199-201ENSMUST00000158812 107 ntBASIC-0.69□□□□□ -2.52
Ercc3P49135 Gm27415-201ENSMUST00000183720 95 ntBASIC-0.69□□□□□ -2.52
Ercc3P49135 Gm24459-201ENSMUST00000082730 86 ntBASIC-0.69□□□□□ -2.52
Ercc3P49135 Gm24047-201ENSMUST00000102405 104 ntBASIC-0.7□□□□□ -2.52
Ercc3P49135 Gm43206-201ENSMUST00000197990 114 ntBASIC-0.7□□□□□ -2.52
Ercc3P49135 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-0.7□□□□□ -2.52
Ercc3P49135 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-0.71□□□□□ -2.52
Ercc3P49135 Mir466m-201ENSMUST00000175052 84 ntBASIC-0.71□□□□□ -2.52
Ercc3P49135 Mir7086-201ENSMUST00000183683 65 ntBASIC-0.71□□□□□ -2.52
Ercc3P49135 Mir6339-201ENSMUST00000185120 117 ntBASIC-0.71□□□□□ -2.52
Ercc3P49135 Gm25681-201ENSMUST00000083938 106 ntBASIC-0.71□□□□□ -2.52
Ercc3P49135 Gm24336-201ENSMUST00000104203 146 ntBASIC-0.72□□□□□ -2.52
Ercc3P49135 Gm24971-201ENSMUST00000175581 110 ntBASIC-0.72□□□□□ -2.52
Ercc3P49135 Gm26125-201ENSMUST00000083357 107 ntBASIC-0.72□□□□□ -2.52
Ercc3P49135 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-0.73□□□□□ -2.53
Ercc3P49135 Gm22446-201ENSMUST00000180108 104 ntBASIC-0.73□□□□□ -2.53
Ercc3P49135 Gm23613-201ENSMUST00000082596 87 ntBASIC-0.73□□□□□ -2.53
Ercc3P49135 Mir15b-201ENSMUST00000083646 64 ntBASIC-0.73□□□□□ -2.53
Ercc3P49135 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC-0.74□□□□□ -2.53
Ercc3P49135 Gm23590-201ENSMUST00000157661 104 ntBASIC-0.74□□□□□ -2.53
Ercc3P49135 Gm24108-201ENSMUST00000175495 77 ntBASIC-0.74□□□□□ -2.53
Ercc3P49135 Mir677-202ENSMUST00000197076 78 ntBASIC-0.74□□□□□ -2.53
Ercc3P49135 Mir302c-201ENSMUST00000083548 68 ntBASIC-0.74□□□□□ -2.53
Ercc3P49135 Gm22335-201ENSMUST00000157724 99 ntBASIC-0.76□□□□□ -2.53
Ercc3P49135 n-R5s8-201ENSMUST00000104121 118 ntBASIC-0.77□□□□□ -2.53
Ercc3P49135 Gm23904-201ENSMUST00000157567 124 ntBASIC-0.77□□□□□ -2.53
Ercc3P49135 Mir3064-201ENSMUST00000175532 67 ntBASIC-0.77□□□□□ -2.53
Ercc3P49135 Gm23308-201ENSMUST00000179475 107 ntBASIC-0.77□□□□□ -2.53
Ercc3P49135 Gm27784-201ENSMUST00000184926 113 ntBASIC-0.77□□□□□ -2.53
Ercc3P49135 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-0.78□□□□□ -2.53
Ercc3P49135 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-0.78□□□□□ -2.53
Ercc3P49135 Gm24203-201ENSMUST00000082949 114 ntBASIC-0.78□□□□□ -2.53
Ercc3P49135 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC-0.8□□□□□ -2.54
Ercc3P49135 CT030170.1-201ENSMUST00000222183 148 ntBASIC-0.8□□□□□ -2.54
Ercc3P49135 Mir1187-201ENSMUST00000116936 122 ntBASIC-0.81□□□□□ -2.54
Ercc3P49135 Gm23173-201ENSMUST00000157161 160 ntBASIC-0.81□□□□□ -2.54
Ercc3P49135 Gm24495-201ENSMUST00000178575 79 ntBASIC-0.81□□□□□ -2.54
Ercc3P49135 Gm22253-201ENSMUST00000179870 79 ntBASIC-0.81□□□□□ -2.54
Ercc3P49135 Gm23376-201ENSMUST00000082938 160 ntBASIC-0.81□□□□□ -2.54
Ercc3P49135 Mir297-1-201ENSMUST00000103800 76 ntBASIC-0.82□□□□□ -2.54
Ercc3P49135 Gm26051-201ENSMUST00000104642 93 ntBASIC-0.82□□□□□ -2.54
Ercc3P49135 Gm22679-201ENSMUST00000116975 100 ntBASIC-0.82□□□□□ -2.54
Ercc3P49135 Snord57-201ENSMUST00000083338 72 ntBASIC-0.82□□□□□ -2.54
Ercc3P49135 Gm23477-201ENSMUST00000158882 128 ntBASIC-0.83□□□□□ -2.54
Ercc3P49135 Mir7057-201ENSMUST00000184685 58 ntBASIC-0.83□□□□□ -2.54
Ercc3P49135 Mir7015-201ENSMUST00000199525 64 ntBASIC-0.83□□□□□ -2.54
Ercc3P49135 Mir297b-201ENSMUST00000102268 109 ntBASIC-0.84□□□□□ -2.54
Ercc3P49135 Gm23166-201ENSMUST00000157164 101 ntBASIC-0.85□□□□□ -2.55
Ercc3P49135 Gm23817-201ENSMUST00000158449 104 ntBASIC-0.85□□□□□ -2.55
Ercc3P49135 Gm24554-201ENSMUST00000158654 73 ntBASIC-0.85□□□□□ -2.55
Ercc3P49135 n-R5s153-201ENSMUST00000083451 116 ntBASIC-0.85□□□□□ -2.55
Ercc3P49135 Gm25601-201ENSMUST00000158356 105 ntBASIC-0.86□□□□□ -2.55
Ercc3P49135 Gm42773-201ENSMUST00000196962 148 ntBASIC-0.86□□□□□ -2.55
Ercc3P49135 Gm19248-201ENSMUST00000209404 110 ntBASIC-0.86□□□□□ -2.55
Ercc3P49135 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC-0.86□□□□□ -2.55
Ercc3P49135 Gm23607-201ENSMUST00000104550 126 ntBASIC-0.88□□□□□ -2.55
Ercc3P49135 Gm26491-201ENSMUST00000179268 121 ntBASIC-0.88□□□□□ -2.55
Ercc3P49135 Mir7231-201ENSMUST00000196252 61 ntBASIC-0.88□□□□□ -2.55
Ercc3P49135 Mir702-201ENSMUST00000102285 109 ntBASIC-0.89□□□□□ -2.55
Ercc3P49135 Mir1948-201ENSMUST00000157325 85 ntBASIC-0.89□□□□□ -2.55
Ercc3P49135 Gm27798-201ENSMUST00000184989 71 ntBASIC-0.89□□□□□ -2.55
Ercc3P49135 Mir451b-201ENSMUST00000196157 72 ntBASIC-0.9□□□□□ -2.55
Ercc3P49135 Mir494-201ENSMUST00000093632 85 ntBASIC-0.9□□□□□ -2.55
Retrieved 100 of 76,532 protein–RNA pairs in 202.6 ms