Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm11333-201ENSMUST00000119479 148 ntBASIC-0.89□□□□□ -2.55
Traf1P39428 Gm22845-201ENSMUST00000157712 104 ntBASIC-0.89□□□□□ -2.55
Traf1P39428 Mir136-201ENSMUST00000199494 62 ntBASIC-0.89□□□□□ -2.55
Traf1P39428 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-0.89□□□□□ -2.55
Traf1P39428 Gm29344-201ENSMUST00000068143 210 ntBASIC-0.89□□□□□ -2.55
Traf1P39428 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-0.89□□□□□ -2.55
Traf1P39428 Gm25061-201ENSMUST00000104665 107 ntBASIC-0.9□□□□□ -2.55
Traf1P39428 Gm23653-201ENSMUST00000116751 97 ntBASIC-0.9□□□□□ -2.55
Traf1P39428 Gm23166-201ENSMUST00000157164 101 ntBASIC-0.9□□□□□ -2.55
Traf1P39428 Gm22729-201ENSMUST00000158088 129 ntBASIC-0.9□□□□□ -2.55
Traf1P39428 Snord8-201ENSMUST00000175303 110 ntBASIC-0.9□□□□□ -2.55
Traf1P39428 Mir6957-201ENSMUST00000183708 64 ntBASIC-0.9□□□□□ -2.55
Traf1P39428 Gm27415-201ENSMUST00000183720 95 ntBASIC-0.9□□□□□ -2.55
Traf1P39428 Gm25854-201ENSMUST00000082792 72 ntBASIC-0.9□□□□□ -2.55
Traf1P39428 Gm24650-201ENSMUST00000157105 103 ntBASIC-0.91□□□□□ -2.56
Traf1P39428 Mir7057-201ENSMUST00000184685 58 ntBASIC-0.91□□□□□ -2.56
Traf1P39428 Mir7055-201ENSMUST00000197423 59 ntBASIC-0.91□□□□□ -2.56
Traf1P39428 Gm25644-201ENSMUST00000083209 107 ntBASIC-0.91□□□□□ -2.56
Traf1P39428 Gm25417-201ENSMUST00000104212 131 ntBASIC-0.92□□□□□ -2.56
Traf1P39428 Gm25712-201ENSMUST00000158634 93 ntBASIC-0.92□□□□□ -2.56
Traf1P39428 Gm25225-201ENSMUST00000158197 102 ntBASIC-0.93□□□□□ -2.56
Traf1P39428 Gm25158-201ENSMUST00000177681 121 ntBASIC-0.93□□□□□ -2.56
Traf1P39428 Gm26229-201ENSMUST00000179699 121 ntBASIC-0.93□□□□□ -2.56
Traf1P39428 Mir297b-201ENSMUST00000102268 109 ntBASIC-0.94□□□□□ -2.56
Traf1P39428 Gm24988-201ENSMUST00000104460 121 ntBASIC-0.94□□□□□ -2.56
Traf1P39428 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-0.94□□□□□ -2.56
Traf1P39428 Mir1948-201ENSMUST00000157325 85 ntBASIC-0.94□□□□□ -2.56
Traf1P39428 Gm24197-201ENSMUST00000175085 109 ntBASIC-0.94□□□□□ -2.56
Traf1P39428 Gm27944-201ENSMUST00000185155 103 ntBASIC-0.94□□□□□ -2.56
Traf1P39428 Gm44589-201ENSMUST00000207025 115 ntBASIC-0.94□□□□□ -2.56
Traf1P39428 Gm22828-201ENSMUST00000083768 107 ntBASIC-0.94□□□□□ -2.56
Traf1P39428 Gm24047-201ENSMUST00000102405 104 ntBASIC-0.95□□□□□ -2.56
Traf1P39428 Gm23630-201ENSMUST00000175292 104 ntBASIC-0.95□□□□□ -2.56
Traf1P39428 Mir7231-201ENSMUST00000196252 61 ntBASIC-0.96□□□□□ -2.56
Traf1P39428 Gm44385-201ENSMUST00000198781 81 ntBASIC-0.96□□□□□ -2.56
Traf1P39428 Mir6964-201ENSMUST00000200252 59 ntBASIC-0.96□□□□□ -2.56
Traf1P39428 CT030170.1-201ENSMUST00000222183 148 ntBASIC-0.96□□□□□ -2.56
Traf1P39428 Gm23613-201ENSMUST00000082596 87 ntBASIC-0.96□□□□□ -2.56
Traf1P39428 Gm25652-201ENSMUST00000083780 103 ntBASIC-0.96□□□□□ -2.56
Traf1P39428 Gm26043-201ENSMUST00000116912 91 ntBASIC-0.97□□□□□ -2.56
Traf1P39428 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-0.98□□□□□ -2.57
Traf1P39428 Gm22539-201ENSMUST00000158167 117 ntBASIC-0.98□□□□□ -2.57
Traf1P39428 Gm24674-201ENSMUST00000179194 104 ntBASIC-0.98□□□□□ -2.57
Traf1P39428 Mir15b-201ENSMUST00000083646 64 ntBASIC-0.98□□□□□ -2.57
Traf1P39428 Snord16a-201ENSMUST00000083895 99 ntBASIC-0.98□□□□□ -2.57
Traf1P39428 Gm23909-201ENSMUST00000104598 131 ntBASIC-0.99□□□□□ -2.57
Traf1P39428 Gm22454-201ENSMUST00000082583 107 ntBASIC-0.99□□□□□ -2.57
Traf1P39428 Gm23570-201ENSMUST00000083029 104 ntBASIC-0.99□□□□□ -2.57
Traf1P39428 Gm22016-201ENSMUST00000158793 114 ntBASIC-1□□□□□ -2.57
Traf1P39428 Mir1839-201ENSMUST00000175366 127 ntBASIC-1□□□□□ -2.57
Traf1P39428 Mir6339-201ENSMUST00000185120 117 ntBASIC-1□□□□□ -2.57
Traf1P39428 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-1□□□□□ -2.57
Traf1P39428 Gm43943-201ENSMUST00000204201 113 ntBASIC-1.01□□□□□ -2.57
Traf1P39428 Gm24586-201ENSMUST00000116695 89 ntBASIC-1.02□□□□□ -2.57
Traf1P39428 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-1.02□□□□□ -2.57
Traf1P39428 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-1.03□□□□□ -2.57
Traf1P39428 Mir3064-201ENSMUST00000175532 67 ntBASIC-1.03□□□□□ -2.57
Traf1P39428 Gm23652-201ENSMUST00000116752 107 ntBASIC-1.04□□□□□ -2.58
Traf1P39428 Gm25112-201ENSMUST00000122680 104 ntBASIC-1.04□□□□□ -2.58
Traf1P39428 AC122335.1-201ENSMUST00000217587 175 ntBASIC-1.04□□□□□ -2.58
Traf1P39428 Gm23590-201ENSMUST00000157661 104 ntBASIC-1.05□□□□□ -2.58
Traf1P39428 Snord123-201ENSMUST00000158692 71 ntBASIC-1.05□□□□□ -2.58
Traf1P39428 Gm24459-201ENSMUST00000082730 86 ntBASIC-1.05□□□□□ -2.58
Traf1P39428 Gm24410-201ENSMUST00000083433 107 ntBASIC-1.05□□□□□ -2.58
Traf1P39428 Mir543-201ENSMUST00000102286 76 ntBASIC-1.06□□□□□ -2.58
Traf1P39428 Gm26262-201ENSMUST00000158024 127 ntBASIC-1.06□□□□□ -2.58
Traf1P39428 Gm25862-201ENSMUST00000158250 129 ntBASIC-1.06□□□□□ -2.58
Traf1P39428 Gm25087-201ENSMUST00000101992 78 ntBASIC-1.07□□□□□ -2.58
Traf1P39428 Mir297-1-201ENSMUST00000103800 76 ntBASIC-1.07□□□□□ -2.58
Traf1P39428 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC-1.07□□□□□ -2.58
Traf1P39428 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-1.07□□□□□ -2.58
Traf1P39428 Gm22805-201ENSMUST00000082739 107 ntBASIC-1.07□□□□□ -2.58
Traf1P39428 Snord57-201ENSMUST00000083338 72 ntBASIC-1.07□□□□□ -2.58
Traf1P39428 n-R5s153-201ENSMUST00000083451 116 ntBASIC-1.07□□□□□ -2.58
Traf1P39428 Gm26467-201ENSMUST00000097257 78 ntBASIC-1.07□□□□□ -2.58
Traf1P39428 Mir876-201ENSMUST00000104659 81 ntBASIC-1.08□□□□□ -2.58
Traf1P39428 Gm27987-201ENSMUST00000184023 93 ntBASIC-1.08□□□□□ -2.58
Traf1P39428 AC161271.1-201ENSMUST00000226914 150 ntBASIC-1.08□□□□□ -2.58
Traf1P39428 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.08□□□□□ -2.58
Traf1P39428 Mir494-201ENSMUST00000093632 85 ntBASIC-1.08□□□□□ -2.58
Traf1P39428 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.09□□□□□ -2.58
Traf1P39428 Gm24482-201ENSMUST00000117005 93 ntBASIC-1.09□□□□□ -2.58
Traf1P39428 Gm24051-201ENSMUST00000158622 75 ntBASIC-1.09□□□□□ -2.58
Traf1P39428 Gm24203-201ENSMUST00000082949 114 ntBASIC-1.09□□□□□ -2.58
Traf1P39428 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-1.1□□□□□ -2.59
Traf1P39428 Gm24003-201ENSMUST00000158455 100 ntBASIC-1.11□□□□□ -2.59
Traf1P39428 Gm26491-201ENSMUST00000179268 121 ntBASIC-1.11□□□□□ -2.59
Traf1P39428 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC-1.11□□□□□ -2.59
Traf1P39428 Gm23376-201ENSMUST00000082938 160 ntBASIC-1.12□□□□□ -2.59
Traf1P39428 Gm22429-201ENSMUST00000158553 130 ntBASIC-1.13□□□□□ -2.59
Traf1P39428 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.13□□□□□ -2.59
Traf1P39428 Gm23856-201ENSMUST00000158380 99 ntBASIC-1.14□□□□□ -2.59
Traf1P39428 Gm25429-201ENSMUST00000157607 132 ntBASIC-1.15□□□□□ -2.59
Traf1P39428 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.15□□□□□ -2.59
Traf1P39428 Gm22446-201ENSMUST00000180108 104 ntBASIC-1.15□□□□□ -2.59
Traf1P39428 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-1.15□□□□□ -2.59
Traf1P39428 Gm23477-201ENSMUST00000158882 128 ntBASIC-1.16□□□□□ -2.6
Traf1P39428 Mir7086-201ENSMUST00000183683 65 ntBASIC-1.16□□□□□ -2.6
Traf1P39428 Gm23573-201ENSMUST00000104408 107 ntBASIC-1.17□□□□□ -2.6
Traf1P39428 CT571266.1-201ENSMUST00000222859 153 ntBASIC-1.17□□□□□ -2.6
Retrieved 100 of 76,532 protein–RNA pairs in 189.4 ms