Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Mir1187-201ENSMUST00000116936 122 ntBASIC-0.3□□□□□ -2.46
Prom1O54990 Gm25249-201ENSMUST00000175471 78 ntBASIC-0.3□□□□□ -2.46
Prom1O54990 Gm25429-201ENSMUST00000157607 132 ntBASIC-0.31□□□□□ -2.46
Prom1O54990 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-0.31□□□□□ -2.46
Prom1O54990 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-0.32□□□□□ -2.46
Prom1O54990 Gm24495-201ENSMUST00000178575 79 ntBASIC-0.32□□□□□ -2.46
Prom1O54990 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-0.32□□□□□ -2.46
Prom1O54990 Gm22253-201ENSMUST00000179870 79 ntBASIC-0.32□□□□□ -2.46
Prom1O54990 Gm22298-201ENSMUST00000082662 133 ntBASIC-0.32□□□□□ -2.46
Prom1O54990 Gm24400-201ENSMUST00000157865 107 ntBASIC-0.33□□□□□ -2.46
Prom1O54990 Gm24946-201ENSMUST00000158332 106 ntBASIC-0.33□□□□□ -2.46
Prom1O54990 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-0.33□□□□□ -2.46
Prom1O54990 Gm23017-201ENSMUST00000177583 72 ntBASIC-0.33□□□□□ -2.46
Prom1O54990 Gm24201-201ENSMUST00000082946 125 ntBASIC-0.33□□□□□ -2.46
Prom1O54990 Gm24508-201ENSMUST00000180104 107 ntBASIC-0.34□□□□□ -2.46
Prom1O54990 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.34□□□□□ -2.46
Prom1O54990 Gm22813-202ENSMUST00000200346 124 ntBASIC-0.34□□□□□ -2.46
Prom1O54990 Gm24459-201ENSMUST00000082730 86 ntBASIC-0.34□□□□□ -2.46
Prom1O54990 Gm25382-201ENSMUST00000157811 97 ntBASIC-0.35□□□□□ -2.47
Prom1O54990 Mir3064-201ENSMUST00000175532 67 ntBASIC-0.35□□□□□ -2.47
Prom1O54990 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC-0.36□□□□□ -2.47
Prom1O54990 Mir378c-201ENSMUST00000184478 99 ntBASIC-0.36□□□□□ -2.47
Prom1O54990 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-0.36□□□□□ -2.47
Prom1O54990 Gm23831-201ENSMUST00000158895 85 ntBASIC-0.37□□□□□ -2.47
Prom1O54990 Gm23421-201ENSMUST00000158934 104 ntBASIC-0.37□□□□□ -2.47
Prom1O54990 Mir3101-201ENSMUST00000175607 88 ntBASIC-0.37□□□□□ -2.47
Prom1O54990 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-0.37□□□□□ -2.47
Prom1O54990 Gm23376-201ENSMUST00000082938 160 ntBASIC-0.37□□□□□ -2.47
Prom1O54990 Gm26125-201ENSMUST00000083357 107 ntBASIC-0.37□□□□□ -2.47
Prom1O54990 Snord42b-201ENSMUST00000083742 69 ntBASIC-0.37□□□□□ -2.47
Prom1O54990 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-0.38□□□□□ -2.47
Prom1O54990 AC154832.1-201ENSMUST00000228928 141 ntBASIC-0.38□□□□□ -2.47
Prom1O54990 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.38□□□□□ -2.47
Prom1O54990 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-0.39□□□□□ -2.47
Prom1O54990 Mir7086-201ENSMUST00000183683 65 ntBASIC-0.39□□□□□ -2.47
Prom1O54990 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.4□□□□□ -2.47
Prom1O54990 Gm22157-201ENSMUST00000158410 104 ntBASIC-0.41□□□□□ -2.48
Prom1O54990 Gm25472-201ENSMUST00000175454 78 ntBASIC-0.41□□□□□ -2.48
Prom1O54990 Gm24927-201ENSMUST00000083397 107 ntBASIC-0.41□□□□□ -2.48
Prom1O54990 Mir15b-201ENSMUST00000083646 64 ntBASIC-0.41□□□□□ -2.48
Prom1O54990 Gm25137-201ENSMUST00000083251 110 ntBASIC-0.42□□□□□ -2.48
Prom1O54990 Gm24377-201ENSMUST00000104398 131 ntBASIC-0.43□□□□□ -2.48
Prom1O54990 Gm22335-201ENSMUST00000157724 99 ntBASIC-0.43□□□□□ -2.48
Prom1O54990 Gm27645-201ENSMUST00000183348 77 ntBASIC-0.43□□□□□ -2.48
Prom1O54990 CT030170.1-201ENSMUST00000222183 148 ntBASIC-0.43□□□□□ -2.48
Prom1O54990 Gm24455-201ENSMUST00000083348 131 ntBASIC-0.43□□□□□ -2.48
Prom1O54990 Gm24714-201ENSMUST00000102382 101 ntBASIC-0.44□□□□□ -2.48
Prom1O54990 Gm23955-201ENSMUST00000157214 100 ntBASIC-0.44□□□□□ -2.48
Prom1O54990 Gm23072-201ENSMUST00000158243 123 ntBASIC-0.44□□□□□ -2.48
Prom1O54990 Gm20305-201ENSMUST00000193226 177 ntBASIC-0.44□□□□□ -2.48
Prom1O54990 Mir494-201ENSMUST00000093632 85 ntBASIC-0.44□□□□□ -2.48
Prom1O54990 Gm22938-201ENSMUST00000103956 120 ntBASIC-0.45□□□□□ -2.48
Prom1O54990 Mir466l-201ENSMUST00000104866 121 ntBASIC-0.45□□□□□ -2.48
Prom1O54990 Gm23590-201ENSMUST00000157661 104 ntBASIC-0.45□□□□□ -2.48
Prom1O54990 Gm27415-201ENSMUST00000183720 95 ntBASIC-0.45□□□□□ -2.48
Prom1O54990 Snord45b-201ENSMUST00000082797 71 ntBASIC-0.45□□□□□ -2.48
Prom1O54990 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.45□□□□□ -2.48
Prom1O54990 Mir297-1-201ENSMUST00000103800 76 ntBASIC-0.46□□□□□ -2.48
Prom1O54990 Gm23477-201ENSMUST00000158882 128 ntBASIC-0.47□□□□□ -2.48
Prom1O54990 Mir7057-201ENSMUST00000184685 58 ntBASIC-0.47□□□□□ -2.48
Prom1O54990 Gm44311-201ENSMUST00000196448 69 ntBASIC-0.47□□□□□ -2.48
Prom1O54990 Gm26043-201ENSMUST00000116912 91 ntBASIC-0.48□□□□□ -2.49
Prom1O54990 Gm23216-201ENSMUST00000179545 107 ntBASIC-0.48□□□□□ -2.49
Prom1O54990 Mir7218-201ENSMUST00000200050 59 ntBASIC-0.48□□□□□ -2.49
Prom1O54990 AC167019.1-201ENSMUST00000227913 106 ntBASIC-0.48□□□□□ -2.49
Prom1O54990 Gm24378-201ENSMUST00000122699 106 ntBASIC-0.49□□□□□ -2.49
Prom1O54990 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC-0.49□□□□□ -2.49
Prom1O54990 Gm24704-201ENSMUST00000093715 107 ntBASIC-0.49□□□□□ -2.49
Prom1O54990 Gm37832-201ENSMUST00000118935 189 ntBASIC-0.5□□□□□ -2.49
Prom1O54990 Gm23856-201ENSMUST00000158380 99 ntBASIC-0.5□□□□□ -2.49
Prom1O54990 n-R5s153-201ENSMUST00000083451 116 ntBASIC-0.5□□□□□ -2.49
Prom1O54990 Mir7231-201ENSMUST00000196252 61 ntBASIC-0.51□□□□□ -2.49
Prom1O54990 Mir18b-201ENSMUST00000103923 83 ntBASIC-0.52□□□□□ -2.49
Prom1O54990 Gm25905-201ENSMUST00000158490 101 ntBASIC-0.52□□□□□ -2.49
Prom1O54990 Gm23293-201ENSMUST00000082552 104 ntBASIC-0.52□□□□□ -2.49
Prom1O54990 Gm23173-201ENSMUST00000157161 160 ntBASIC-0.53□□□□□ -2.49
Prom1O54990 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-0.53□□□□□ -2.49
Prom1O54990 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-0.53□□□□□ -2.49
Prom1O54990 Mir96-201ENSMUST00000083652 106 ntBASIC-0.53□□□□□ -2.49
Prom1O54990 Gm24971-201ENSMUST00000175581 110 ntBASIC-0.54□□□□□ -2.5
Prom1O54990 Gm26131-201ENSMUST00000082725 110 ntBASIC-0.54□□□□□ -2.5
Prom1O54990 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC-0.55□□□□□ -2.5
Prom1O54990 Mir6961-201ENSMUST00000183874 67 ntBASIC-0.55□□□□□ -2.5
Prom1O54990 Gm27935-201ENSMUST00000183894 79 ntBASIC-0.55□□□□□ -2.5
Prom1O54990 Mir6339-201ENSMUST00000185120 117 ntBASIC-0.55□□□□□ -2.5
Prom1O54990 Gm23613-201ENSMUST00000082596 87 ntBASIC-0.55□□□□□ -2.5
Prom1O54990 Gm25431-201ENSMUST00000101978 107 ntBASIC-0.56□□□□□ -2.5
Prom1O54990 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC-0.56□□□□□ -2.5
Prom1O54990 Gm22385-201ENSMUST00000158189 101 ntBASIC-0.56□□□□□ -2.5
Prom1O54990 Gm27784-201ENSMUST00000184926 113 ntBASIC-0.56□□□□□ -2.5
Prom1O54990 Gm24725-201ENSMUST00000158229 125 ntBASIC-0.57□□□□□ -2.5
Prom1O54990 Gm25601-201ENSMUST00000158356 105 ntBASIC-0.57□□□□□ -2.5
Prom1O54990 Gm22566-201ENSMUST00000175541 85 ntBASIC-0.57□□□□□ -2.5
Prom1O54990 Gm24336-201ENSMUST00000104203 146 ntBASIC-0.58□□□□□ -2.5
Prom1O54990 Gm22033-201ENSMUST00000116947 90 ntBASIC-0.58□□□□□ -2.5
Prom1O54990 Gm22095-201ENSMUST00000158984 150 ntBASIC-0.58□□□□□ -2.5
Prom1O54990 Mir7055-201ENSMUST00000197423 59 ntBASIC-0.58□□□□□ -2.5
Prom1O54990 Gm22717-201ENSMUST00000122703 171 ntBASIC-0.59□□□□□ -2.5
Prom1O54990 Mir5124b-201ENSMUST00000184251 85 ntBASIC-0.59□□□□□ -2.5
Prom1O54990 n-R5s155-201ENSMUST00000122531 113 ntBASIC-0.6□□□□□ -2.51
Retrieved 100 of 76,532 protein–RNA pairs in 180 ms