Protein–RNA interactions for Protein: D3YZV8

Ccdc8, Coiled-coil domain-containing protein 8 homolog, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc8D3YZV8 Mir297b-201ENSMUST00000102268 109 ntBASIC-1.29□□□□□ -2.62
Ccdc8D3YZV8 Gm25417-201ENSMUST00000104212 131 ntBASIC-1.29□□□□□ -2.62
Ccdc8D3YZV8 Gm24650-201ENSMUST00000157105 103 ntBASIC-1.29□□□□□ -2.62
Ccdc8D3YZV8 Gm23349-201ENSMUST00000158432 98 ntBASIC-1.29□□□□□ -2.62
Ccdc8D3YZV8 Gm25289-201ENSMUST00000122799 119 ntBASIC-1.3□□□□□ -2.62
Ccdc8D3YZV8 Mir1948-201ENSMUST00000157325 85 ntBASIC-1.3□□□□□ -2.62
Ccdc8D3YZV8 Gm22213-201ENSMUST00000157564 119 ntBASIC-1.3□□□□□ -2.62
Ccdc8D3YZV8 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.3□□□□□ -2.62
Ccdc8D3YZV8 Gm22004-201ENSMUST00000101884 107 ntBASIC-1.31□□□□□ -2.62
Ccdc8D3YZV8 Gm24946-201ENSMUST00000158332 106 ntBASIC-1.31□□□□□ -2.62
Ccdc8D3YZV8 mt-Tf-201ENSMUST00000082387 68 ntBASIC-1.31□□□□□ -2.62
Ccdc8D3YZV8 Gm25542-201ENSMUST00000116889 94 ntBASIC-1.32□□□□□ -2.62
Ccdc8D3YZV8 Gm26466-201ENSMUST00000179615 79 ntBASIC-1.32□□□□□ -2.62
Ccdc8D3YZV8 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-1.32□□□□□ -2.62
Ccdc8D3YZV8 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-1.33□□□□□ -2.62
Ccdc8D3YZV8 Gm26262-201ENSMUST00000158024 127 ntBASIC-1.33□□□□□ -2.62
Ccdc8D3YZV8 Gm24003-201ENSMUST00000158455 100 ntBASIC-1.33□□□□□ -2.62
Ccdc8D3YZV8 Gm25158-201ENSMUST00000177681 121 ntBASIC-1.33□□□□□ -2.62
Ccdc8D3YZV8 Gm26229-201ENSMUST00000179699 121 ntBASIC-1.33□□□□□ -2.62
Ccdc8D3YZV8 Gm24705-201ENSMUST00000082808 107 ntBASIC-1.33□□□□□ -2.62
Ccdc8D3YZV8 Gm23678-201ENSMUST00000083157 107 ntBASIC-1.33□□□□□ -2.62
Ccdc8D3YZV8 Mir3083-201ENSMUST00000175377 64 ntBASIC-1.34□□□□□ -2.62
Ccdc8D3YZV8 Gm24167-201ENSMUST00000177733 124 ntBASIC-1.34□□□□□ -2.62
Ccdc8D3YZV8 Gm24028-201ENSMUST00000178991 124 ntBASIC-1.34□□□□□ -2.62
Ccdc8D3YZV8 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-1.34□□□□□ -2.62
Ccdc8D3YZV8 Mir7231-201ENSMUST00000196252 61 ntBASIC-1.35□□□□□ -2.63
Ccdc8D3YZV8 AC160962.3-201ENSMUST00000225914 112 ntBASIC-1.35□□□□□ -2.63
Ccdc8D3YZV8 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-1.36□□□□□ -2.63
Ccdc8D3YZV8 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.37□□□□□ -2.63
Ccdc8D3YZV8 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-1.37□□□□□ -2.63
Ccdc8D3YZV8 Gm43943-201ENSMUST00000204201 113 ntBASIC-1.37□□□□□ -2.63
Ccdc8D3YZV8 Gm25798-201ENSMUST00000082641 107 ntBASIC-1.37□□□□□ -2.63
Ccdc8D3YZV8 Snord57-201ENSMUST00000083338 72 ntBASIC-1.37□□□□□ -2.63
Ccdc8D3YZV8 Gm26125-201ENSMUST00000083357 107 ntBASIC-1.37□□□□□ -2.63
Ccdc8D3YZV8 Snord123-201ENSMUST00000158692 71 ntBASIC-1.38□□□□□ -2.63
Ccdc8D3YZV8 Gm23369-201ENSMUST00000175406 105 ntBASIC-1.38□□□□□ -2.63
Ccdc8D3YZV8 CT030170.1-201ENSMUST00000222183 148 ntBASIC-1.38□□□□□ -2.63
Ccdc8D3YZV8 Gm25854-201ENSMUST00000082792 72 ntBASIC-1.38□□□□□ -2.63
Ccdc8D3YZV8 Gm25644-201ENSMUST00000083209 107 ntBASIC-1.38□□□□□ -2.63
Ccdc8D3YZV8 Gm22354-201ENSMUST00000083919 70 ntBASIC-1.38□□□□□ -2.63
Ccdc8D3YZV8 Gm24988-201ENSMUST00000104460 121 ntBASIC-1.39□□□□□ -2.63
Ccdc8D3YZV8 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-1.39□□□□□ -2.63
Ccdc8D3YZV8 Gm25061-201ENSMUST00000104665 107 ntBASIC-1.4□□□□□ -2.63
Ccdc8D3YZV8 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.4□□□□□ -2.63
Ccdc8D3YZV8 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.4□□□□□ -2.63
Ccdc8D3YZV8 Gm24234-201ENSMUST00000104316 107 ntBASIC-1.41□□□□□ -2.64
Ccdc8D3YZV8 Gm24605-201ENSMUST00000104772 96 ntBASIC-1.41□□□□□ -2.64
Ccdc8D3YZV8 Gm11333-201ENSMUST00000119479 148 ntBASIC-1.41□□□□□ -2.64
Ccdc8D3YZV8 Gm22828-201ENSMUST00000083768 107 ntBASIC-1.41□□□□□ -2.64
Ccdc8D3YZV8 Mir543-201ENSMUST00000102286 76 ntBASIC-1.42□□□□□ -2.64
Ccdc8D3YZV8 AC122335.1-201ENSMUST00000217587 175 ntBASIC-1.42□□□□□ -2.64
Ccdc8D3YZV8 Gm24051-201ENSMUST00000158622 75 ntBASIC-1.43□□□□□ -2.64
Ccdc8D3YZV8 AC161271.1-201ENSMUST00000226914 150 ntBASIC-1.43□□□□□ -2.64
Ccdc8D3YZV8 Gm23244-201ENSMUST00000083375 92 ntBASIC-1.43□□□□□ -2.64
Ccdc8D3YZV8 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.44□□□□□ -2.64
Ccdc8D3YZV8 Gm25862-201ENSMUST00000158250 129 ntBASIC-1.44□□□□□ -2.64
Ccdc8D3YZV8 Gm25740-201ENSMUST00000180247 107 ntBASIC-1.45□□□□□ -2.64
Ccdc8D3YZV8 Mir15b-201ENSMUST00000083646 64 ntBASIC-1.45□□□□□ -2.64
Ccdc8D3YZV8 Mir876-201ENSMUST00000104659 81 ntBASIC-1.46□□□□□ -2.64
Ccdc8D3YZV8 Gm23590-201ENSMUST00000157661 104 ntBASIC-1.46□□□□□ -2.64
Ccdc8D3YZV8 Gm24725-201ENSMUST00000158229 125 ntBASIC-1.46□□□□□ -2.64
Ccdc8D3YZV8 Gm25380-201ENSMUST00000175463 107 ntBASIC-1.47□□□□□ -2.64
Ccdc8D3YZV8 Gm24641-201ENSMUST00000178055 107 ntBASIC-1.47□□□□□ -2.64
Ccdc8D3YZV8 Gm25484-201ENSMUST00000178217 107 ntBASIC-1.47□□□□□ -2.64
Ccdc8D3YZV8 Gm26138-201ENSMUST00000179236 107 ntBASIC-1.47□□□□□ -2.64
Ccdc8D3YZV8 Gm22821-201ENSMUST00000179288 107 ntBASIC-1.47□□□□□ -2.64
Ccdc8D3YZV8 Gm23298-201ENSMUST00000083181 107 ntBASIC-1.47□□□□□ -2.64
Ccdc8D3YZV8 Gm22057-201ENSMUST00000083387 107 ntBASIC-1.47□□□□□ -2.64
Ccdc8D3YZV8 Gm25516-201ENSMUST00000083857 107 ntBASIC-1.47□□□□□ -2.64
Ccdc8D3YZV8 Gm23644-201ENSMUST00000157856 77 ntBASIC-1.48□□□□□ -2.65
Ccdc8D3YZV8 Gm22729-201ENSMUST00000158088 129 ntBASIC-1.48□□□□□ -2.65
Ccdc8D3YZV8 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.48□□□□□ -2.65
Ccdc8D3YZV8 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.48□□□□□ -2.65
Ccdc8D3YZV8 Gm26104-201ENSMUST00000157250 108 ntBASIC-1.49□□□□□ -2.65
Ccdc8D3YZV8 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.49□□□□□ -2.65
Ccdc8D3YZV8 Gm23335-201ENSMUST00000117021 90 ntBASIC-1.51□□□□□ -2.65
Ccdc8D3YZV8 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.51□□□□□ -2.65
Ccdc8D3YZV8 Mir7218-201ENSMUST00000200050 59 ntBASIC-1.51□□□□□ -2.65
Ccdc8D3YZV8 Gm24148-201ENSMUST00000082762 80 ntBASIC-1.51□□□□□ -2.65
Ccdc8D3YZV8 Gm23421-201ENSMUST00000158934 104 ntBASIC-1.53□□□□□ -2.65
Ccdc8D3YZV8 Mir3064-201ENSMUST00000175532 67 ntBASIC-1.53□□□□□ -2.65
Ccdc8D3YZV8 Gm24674-201ENSMUST00000179194 104 ntBASIC-1.53□□□□□ -2.65
Ccdc8D3YZV8 Gm24612-201ENSMUST00000083267 107 ntBASIC-1.53□□□□□ -2.65
Ccdc8D3YZV8 Mir494-201ENSMUST00000093632 85 ntBASIC-1.53□□□□□ -2.65
Ccdc8D3YZV8 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-1.54□□□□□ -2.66
Ccdc8D3YZV8 Gm25087-201ENSMUST00000101992 78 ntBASIC-1.55□□□□□ -2.66
Ccdc8D3YZV8 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.55□□□□□ -2.66
Ccdc8D3YZV8 Gm25987-201ENSMUST00000083234 107 ntBASIC-1.55□□□□□ -2.66
Ccdc8D3YZV8 Gm26467-201ENSMUST00000097257 78 ntBASIC-1.55□□□□□ -2.66
Ccdc8D3YZV8 Mir450b-201ENSMUST00000102095 82 ntBASIC-1.56□□□□□ -2.66
Ccdc8D3YZV8 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC-1.56□□□□□ -2.66
Ccdc8D3YZV8 Gm22805-201ENSMUST00000082739 107 ntBASIC-1.56□□□□□ -2.66
Ccdc8D3YZV8 Gm23570-201ENSMUST00000083029 104 ntBASIC-1.56□□□□□ -2.66
Ccdc8D3YZV8 Gm25112-201ENSMUST00000122680 104 ntBASIC-1.57□□□□□ -2.66
Ccdc8D3YZV8 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.57□□□□□ -2.66
Ccdc8D3YZV8 Gm23477-201ENSMUST00000158882 128 ntBASIC-1.57□□□□□ -2.66
Ccdc8D3YZV8 Gm25815-201ENSMUST00000082755 107 ntBASIC-1.57□□□□□ -2.66
Ccdc8D3YZV8 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-1.57□□□□□ -2.66
Ccdc8D3YZV8 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-1.58□□□□□ -2.66
Ccdc8D3YZV8 Gm22385-201ENSMUST00000158189 101 ntBASIC-1.58□□□□□ -2.66
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms