Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm23017-201ENSMUST00000177583 72 ntBASIC0.08□□□□□ -2.4
H2afb3S4R1G7 Mir327-201ENSMUST00000199328 69 ntBASIC0.08□□□□□ -2.4
H2afb3S4R1G7 Snord85-201ENSMUST00000083262 73 ntBASIC0.08□□□□□ -2.4
H2afb3S4R1G7 Gm22327-201ENSMUST00000158899 108 ntBASIC0.07□□□□□ -2.4
H2afb3S4R1G7 Mir6394-201ENSMUST00000184738 99 ntBASIC0.06□□□□□ -2.4
H2afb3S4R1G7 Gm44458-201ENSMUST00000196594 143 ntBASIC0.06□□□□□ -2.4
H2afb3S4R1G7 Mir200b-201ENSMUST00000083615 70 ntBASIC0.06□□□□□ -2.4
H2afb3S4R1G7 Gm22368-201ENSMUST00000102416 109 ntBASIC0.04□□□□□ -2.4
H2afb3S4R1G7 Gm23237-201ENSMUST00000104639 92 ntBASIC0.03□□□□□ -2.4
H2afb3S4R1G7 Mir7231-201ENSMUST00000196252 61 ntBASIC0.03□□□□□ -2.4
H2afb3S4R1G7 Gm44328-201ENSMUST00000199331 75 ntBASIC0.03□□□□□ -2.4
H2afb3S4R1G7 Gm25552-201ENSMUST00000158081 91 ntBASIC0.02□□□□□ -2.41
H2afb3S4R1G7 Mir6985-201ENSMUST00000184641 61 ntBASIC0.02□□□□□ -2.41
H2afb3S4R1G7 Gm22540-201ENSMUST00000158168 117 ntBASIC0.01□□□□□ -2.41
H2afb3S4R1G7 Gm24226-201ENSMUST00000158826 97 ntBASIC0.01□□□□□ -2.41
H2afb3S4R1G7 Gm44375-201ENSMUST00000196657 150 ntBASIC0.01□□□□□ -2.41
H2afb3S4R1G7 Gm25703-201ENSMUST00000083123 151 ntBASIC0.01□□□□□ -2.41
H2afb3S4R1G7 Gm26257-201ENSMUST00000122500 107 ntBASIC-0.01□□□□□ -2.41
H2afb3S4R1G7 Gm23072-201ENSMUST00000158243 123 ntBASIC-0.01□□□□□ -2.41
H2afb3S4R1G7 Gm25510-201ENSMUST00000116986 123 ntBASIC-0.02□□□□□ -2.41
H2afb3S4R1G7 Mir7651-201ENSMUST00000184154 64 ntBASIC-0.02□□□□□ -2.41
H2afb3S4R1G7 Gm24612-201ENSMUST00000083267 107 ntBASIC-0.02□□□□□ -2.41
H2afb3S4R1G7 Mir7077-201ENSMUST00000183991 57 ntBASIC-0.03□□□□□ -2.41
H2afb3S4R1G7 Gm24379-201ENSMUST00000122695 86 ntBASIC-0.04□□□□□ -2.42
H2afb3S4R1G7 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC-0.04□□□□□ -2.42
H2afb3S4R1G7 Gm23955-201ENSMUST00000157214 100 ntBASIC-0.04□□□□□ -2.42
H2afb3S4R1G7 Gm23590-201ENSMUST00000157661 104 ntBASIC-0.04□□□□□ -2.42
H2afb3S4R1G7 Gm38208-201ENSMUST00000192476 114 ntBASIC-0.04□□□□□ -2.42
H2afb3S4R1G7 Mir344-201ENSMUST00000083634 95 ntBASIC-0.04□□□□□ -2.42
H2afb3S4R1G7 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.05□□□□□ -2.42
H2afb3S4R1G7 Gm27749-201ENSMUST00000183651 125 ntBASIC-0.05□□□□□ -2.42
H2afb3S4R1G7 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.06□□□□□ -2.42
H2afb3S4R1G7 Gm25354-201ENSMUST00000179110 105 ntBASIC-0.06□□□□□ -2.42
H2afb3S4R1G7 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.06□□□□□ -2.42
H2afb3S4R1G7 Gm26379-202ENSMUST00000200225 132 ntBASIC-0.06□□□□□ -2.42
H2afb3S4R1G7 Gm22717-201ENSMUST00000122703 171 ntBASIC-0.07□□□□□ -2.42
H2afb3S4R1G7 Gm23826-201ENSMUST00000157394 119 ntBASIC-0.07□□□□□ -2.42
H2afb3S4R1G7 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.08□□□□□ -2.42
H2afb3S4R1G7 Gm23126-201ENSMUST00000104260 134 ntBASIC-0.08□□□□□ -2.42
H2afb3S4R1G7 Gm24555-201ENSMUST00000104548 124 ntBASIC-0.08□□□□□ -2.42
H2afb3S4R1G7 Gm37832-201ENSMUST00000118935 189 ntBASIC-0.08□□□□□ -2.42
H2afb3S4R1G7 Gm25652-201ENSMUST00000083780 103 ntBASIC-0.08□□□□□ -2.42
H2afb3S4R1G7 Gm25183-201ENSMUST00000157752 106 ntBASIC-0.09□□□□□ -2.42
H2afb3S4R1G7 Gm24218-201ENSMUST00000180163 105 ntBASIC-0.09□□□□□ -2.42
H2afb3S4R1G7 Gm25087-201ENSMUST00000101992 78 ntBASIC-0.1□□□□□ -2.43
H2afb3S4R1G7 Gm27450-201ENSMUST00000104632 90 ntBASIC-0.1□□□□□ -2.43
H2afb3S4R1G7 Gm25648-201ENSMUST00000177844 79 ntBASIC-0.1□□□□□ -2.43
H2afb3S4R1G7 Gm29344-201ENSMUST00000068143 210 ntBASIC-0.1□□□□□ -2.43
H2afb3S4R1G7 Gm26467-201ENSMUST00000097257 78 ntBASIC-0.1□□□□□ -2.43
H2afb3S4R1G7 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.11□□□□□ -2.43
H2afb3S4R1G7 Mir219b-201ENSMUST00000198317 65 ntBASIC-0.11□□□□□ -2.43
H2afb3S4R1G7 Gm23730-201ENSMUST00000083236 107 ntBASIC-0.11□□□□□ -2.43
H2afb3S4R1G7 Gm22048-201ENSMUST00000104721 89 ntBASIC-0.12□□□□□ -2.43
H2afb3S4R1G7 Gm22431-201ENSMUST00000158545 107 ntBASIC-0.12□□□□□ -2.43
H2afb3S4R1G7 Gm23649-201ENSMUST00000179007 107 ntBASIC-0.12□□□□□ -2.43
H2afb3S4R1G7 Gm26491-201ENSMUST00000179268 121 ntBASIC-0.12□□□□□ -2.43
H2afb3S4R1G7 AC238676.2-201ENSMUST00000220910 94 ntBASIC-0.12□□□□□ -2.43
H2afb3S4R1G7 Gm23173-201ENSMUST00000157161 160 ntBASIC-0.13□□□□□ -2.43
H2afb3S4R1G7 AC157278.1-201ENSMUST00000221621 148 ntBASIC-0.13□□□□□ -2.43
H2afb3S4R1G7 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.13□□□□□ -2.43
H2afb3S4R1G7 Mir382-201ENSMUST00000083494 76 ntBASIC-0.13□□□□□ -2.43
H2afb3S4R1G7 Gm24377-201ENSMUST00000104398 131 ntBASIC-0.14□□□□□ -2.43
H2afb3S4R1G7 Gm25802-201ENSMUST00000082639 77 ntBASIC-0.14□□□□□ -2.43
H2afb3S4R1G7 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.14□□□□□ -2.43
H2afb3S4R1G7 Snord42b-201ENSMUST00000083742 69 ntBASIC-0.14□□□□□ -2.43
H2afb3S4R1G7 Gm24342-201ENSMUST00000103907 104 ntBASIC-0.15□□□□□ -2.43
H2afb3S4R1G7 Gm22157-201ENSMUST00000158410 104 ntBASIC-0.15□□□□□ -2.43
H2afb3S4R1G7 Gm24508-201ENSMUST00000180104 107 ntBASIC-0.15□□□□□ -2.43
H2afb3S4R1G7 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.16□□□□□ -2.44
H2afb3S4R1G7 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-0.16□□□□□ -2.44
H2afb3S4R1G7 Mir6896-201ENSMUST00000198033 73 ntBASIC-0.16□□□□□ -2.44
H2afb3S4R1G7 Snord57-201ENSMUST00000083338 72 ntBASIC-0.16□□□□□ -2.44
H2afb3S4R1G7 Gm24927-201ENSMUST00000083397 107 ntBASIC-0.16□□□□□ -2.44
H2afb3S4R1G7 Gm22335-201ENSMUST00000157724 99 ntBASIC-0.17□□□□□ -2.44
H2afb3S4R1G7 Gm27784-201ENSMUST00000184926 113 ntBASIC-0.17□□□□□ -2.44
H2afb3S4R1G7 Gm27798-201ENSMUST00000184989 71 ntBASIC-0.17□□□□□ -2.44
H2afb3S4R1G7 Mir196a-2-201ENSMUST00000083554 85 ntBASIC-0.17□□□□□ -2.44
H2afb3S4R1G7 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.18□□□□□ -2.44
H2afb3S4R1G7 Gm25249-201ENSMUST00000175471 78 ntBASIC-0.18□□□□□ -2.44
H2afb3S4R1G7 Gm25496-201ENSMUST00000104430 120 ntBASIC-0.19□□□□□ -2.44
H2afb3S4R1G7 Gm22016-201ENSMUST00000158793 114 ntBASIC-0.19□□□□□ -2.44
H2afb3S4R1G7 Gm22965-201ENSMUST00000157958 101 ntBASIC-0.21□□□□□ -2.44
H2afb3S4R1G7 Gm24725-201ENSMUST00000158229 125 ntBASIC-0.21□□□□□ -2.44
H2afb3S4R1G7 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.21□□□□□ -2.44
H2afb3S4R1G7 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.21□□□□□ -2.44
H2afb3S4R1G7 Gm24455-201ENSMUST00000083348 131 ntBASIC-0.21□□□□□ -2.44
H2afb3S4R1G7 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.22□□□□□ -2.44
H2afb3S4R1G7 Gm22039-201ENSMUST00000157278 132 ntBASIC-0.22□□□□□ -2.44
H2afb3S4R1G7 Gm26139-201ENSMUST00000180098 107 ntBASIC-0.22□□□□□ -2.44
H2afb3S4R1G7 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.22□□□□□ -2.44
H2afb3S4R1G7 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.22□□□□□ -2.44
H2afb3S4R1G7 Gm25326-201ENSMUST00000101903 107 ntBASIC-0.23□□□□□ -2.45
H2afb3S4R1G7 Gm25950-201ENSMUST00000175331 100 ntBASIC-0.23□□□□□ -2.45
H2afb3S4R1G7 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-0.23□□□□□ -2.45
H2afb3S4R1G7 Gm24971-201ENSMUST00000175581 110 ntBASIC-0.24□□□□□ -2.45
H2afb3S4R1G7 Gm23240-201ENSMUST00000083009 121 ntBASIC-0.24□□□□□ -2.45
H2afb3S4R1G7 Gm23573-201ENSMUST00000104408 107 ntBASIC-0.25□□□□□ -2.45
H2afb3S4R1G7 Gm22078-201ENSMUST00000157593 103 ntBASIC-0.25□□□□□ -2.45
H2afb3S4R1G7 Gm25472-201ENSMUST00000175454 78 ntBASIC-0.25□□□□□ -2.45
H2afb3S4R1G7 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-0.26□□□□□ -2.45
Retrieved 100 of 76,532 protein–RNA pairs in 155.6 ms