Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm23652-201ENSMUST00000116752 107 ntBASIC-0.54□□□□□ -2.5
H2afb1S4R1E0 Gm37832-201ENSMUST00000118935 189 ntBASIC-0.55□□□□□ -2.5
H2afb1S4R1E0 Gm25137-201ENSMUST00000083251 110 ntBASIC-0.55□□□□□ -2.5
H2afb1S4R1E0 Gm25417-201ENSMUST00000104212 131 ntBASIC-0.56□□□□□ -2.5
H2afb1S4R1E0 Gm25787-201ENSMUST00000104709 92 ntBASIC-0.56□□□□□ -2.5
H2afb1S4R1E0 Gm23278-201ENSMUST00000157911 143 ntBASIC-0.56□□□□□ -2.5
H2afb1S4R1E0 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.57□□□□□ -2.5
H2afb1S4R1E0 Gm24674-201ENSMUST00000179194 104 ntBASIC-0.57□□□□□ -2.5
H2afb1S4R1E0 Gm25879-201ENSMUST00000104330 107 ntBASIC-0.58□□□□□ -2.5
H2afb1S4R1E0 Gm22962-201ENSMUST00000157962 73 ntBASIC-0.58□□□□□ -2.5
H2afb1S4R1E0 Gm11333-201ENSMUST00000119479 148 ntBASIC-0.59□□□□□ -2.5
H2afb1S4R1E0 Gm24971-201ENSMUST00000175581 110 ntBASIC-0.59□□□□□ -2.5
H2afb1S4R1E0 Mir8116-201ENSMUST00000184134 97 ntBASIC-0.59□□□□□ -2.5
H2afb1S4R1E0 Gm23955-201ENSMUST00000157214 100 ntBASIC-0.6□□□□□ -2.51
H2afb1S4R1E0 CT571266.1-201ENSMUST00000222859 153 ntBASIC-0.6□□□□□ -2.51
H2afb1S4R1E0 Gm26104-201ENSMUST00000157250 108 ntBASIC-0.61□□□□□ -2.51
H2afb1S4R1E0 Gm22340-201ENSMUST00000157717 114 ntBASIC-0.61□□□□□ -2.51
H2afb1S4R1E0 Gm24946-201ENSMUST00000158332 106 ntBASIC-0.61□□□□□ -2.51
H2afb1S4R1E0 Gm23180-201ENSMUST00000158686 125 ntBASIC-0.61□□□□□ -2.51
H2afb1S4R1E0 Gm27784-201ENSMUST00000184926 113 ntBASIC-0.61□□□□□ -2.51
H2afb1S4R1E0 Gm24336-201ENSMUST00000104203 146 ntBASIC-0.62□□□□□ -2.51
H2afb1S4R1E0 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-0.62□□□□□ -2.51
H2afb1S4R1E0 Mir6905-201ENSMUST00000184228 70 ntBASIC-0.62□□□□□ -2.51
H2afb1S4R1E0 Gm22251-201ENSMUST00000083216 107 ntBASIC-0.62□□□□□ -2.51
H2afb1S4R1E0 Gm23038-201ENSMUST00000083873 104 ntBASIC-0.62□□□□□ -2.51
H2afb1S4R1E0 Gm22335-201ENSMUST00000157724 99 ntBASIC-0.63□□□□□ -2.51
H2afb1S4R1E0 Gm24400-201ENSMUST00000157865 107 ntBASIC-0.63□□□□□ -2.51
H2afb1S4R1E0 Mir6915-201ENSMUST00000198839 69 ntBASIC-0.63□□□□□ -2.51
H2afb1S4R1E0 Gm6293-201ENSMUST00000050339 195 ntBASIC-0.63□□□□□ -2.51
H2afb1S4R1E0 Mir669f-201ENSMUST00000103850 121 ntBASIC-0.64□□□□□ -2.51
H2afb1S4R1E0 Gm25885-201ENSMUST00000157779 109 ntBASIC-0.64□□□□□ -2.51
H2afb1S4R1E0 Snord50a-201ENSMUST00000178154 72 ntBASIC-0.64□□□□□ -2.51
H2afb1S4R1E0 Gm24463-201ENSMUST00000178417 72 ntBASIC-0.64□□□□□ -2.51
H2afb1S4R1E0 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC-0.65□□□□□ -2.51
H2afb1S4R1E0 n-R5s8-201ENSMUST00000104121 118 ntBASIC-0.65□□□□□ -2.51
H2afb1S4R1E0 Gm23749-201ENSMUST00000104223 131 ntBASIC-0.65□□□□□ -2.51
H2afb1S4R1E0 Gm25388-201ENSMUST00000157339 151 ntBASIC-0.65□□□□□ -2.51
H2afb1S4R1E0 Gm22539-201ENSMUST00000158167 117 ntBASIC-0.65□□□□□ -2.51
H2afb1S4R1E0 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.65□□□□□ -2.51
H2afb1S4R1E0 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-0.65□□□□□ -2.51
H2afb1S4R1E0 AC122335.1-201ENSMUST00000217587 175 ntBASIC-0.65□□□□□ -2.51
H2afb1S4R1E0 Gm22950-201ENSMUST00000082776 107 ntBASIC-0.65□□□□□ -2.51
H2afb1S4R1E0 Gm22827-201ENSMUST00000083766 107 ntBASIC-0.65□□□□□ -2.51
H2afb1S4R1E0 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-0.66□□□□□ -2.52
H2afb1S4R1E0 Gm23570-201ENSMUST00000083029 104 ntBASIC-0.66□□□□□ -2.52
H2afb1S4R1E0 Gm27987-201ENSMUST00000184023 93 ntBASIC-0.68□□□□□ -2.52
H2afb1S4R1E0 Mir378c-201ENSMUST00000184478 99 ntBASIC-0.68□□□□□ -2.52
H2afb1S4R1E0 Gm42773-201ENSMUST00000196962 148 ntBASIC-0.68□□□□□ -2.52
H2afb1S4R1E0 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.69□□□□□ -2.52
H2afb1S4R1E0 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC-0.69□□□□□ -2.52
H2afb1S4R1E0 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.69□□□□□ -2.52
H2afb1S4R1E0 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.69□□□□□ -2.52
H2afb1S4R1E0 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.69□□□□□ -2.52
H2afb1S4R1E0 Gm44932-201ENSMUST00000206799 121 ntBASIC-0.69□□□□□ -2.52
H2afb1S4R1E0 Mir5124a-201ENSMUST00000175528 72 ntBASIC-0.7□□□□□ -2.52
H2afb1S4R1E0 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-0.71□□□□□ -2.52
H2afb1S4R1E0 Mir876-201ENSMUST00000104659 81 ntBASIC-0.71□□□□□ -2.52
H2afb1S4R1E0 Gm22048-201ENSMUST00000104721 89 ntBASIC-0.71□□□□□ -2.52
H2afb1S4R1E0 Gm23173-201ENSMUST00000157161 160 ntBASIC-0.71□□□□□ -2.52
H2afb1S4R1E0 Mir3064-201ENSMUST00000175532 67 ntBASIC-0.71□□□□□ -2.52
H2afb1S4R1E0 Gm27415-201ENSMUST00000183720 95 ntBASIC-0.71□□□□□ -2.52
H2afb1S4R1E0 CT030170.1-201ENSMUST00000222183 148 ntBASIC-0.71□□□□□ -2.52
H2afb1S4R1E0 Gm27798-201ENSMUST00000184989 71 ntBASIC-0.72□□□□□ -2.52
H2afb1S4R1E0 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC-0.73□□□□□ -2.53
H2afb1S4R1E0 Mir7231-201ENSMUST00000196252 61 ntBASIC-0.73□□□□□ -2.53
H2afb1S4R1E0 Gm43206-201ENSMUST00000197990 114 ntBASIC-0.73□□□□□ -2.53
H2afb1S4R1E0 Gm25022-201ENSMUST00000102205 83 ntBASIC-0.74□□□□□ -2.53
H2afb1S4R1E0 Mir18b-201ENSMUST00000103923 83 ntBASIC-0.74□□□□□ -2.53
H2afb1S4R1E0 Mir467a-6-201ENSMUST00000177790 83 ntBASIC-0.74□□□□□ -2.53
H2afb1S4R1E0 Mir467a-3-201ENSMUST00000178082 83 ntBASIC-0.74□□□□□ -2.53
H2afb1S4R1E0 Mir467a-7-201ENSMUST00000178635 83 ntBASIC-0.74□□□□□ -2.53
H2afb1S4R1E0 Mir467a-10-201ENSMUST00000179320 83 ntBASIC-0.74□□□□□ -2.53
H2afb1S4R1E0 Mir467a-5-201ENSMUST00000179352 83 ntBASIC-0.74□□□□□ -2.53
H2afb1S4R1E0 Mir467a-2-201ENSMUST00000179447 83 ntBASIC-0.74□□□□□ -2.53
H2afb1S4R1E0 Mir467a-9-201ENSMUST00000179752 83 ntBASIC-0.74□□□□□ -2.53
H2afb1S4R1E0 Mir467a-4-201ENSMUST00000179923 83 ntBASIC-0.74□□□□□ -2.53
H2afb1S4R1E0 Mir467a-8-201ENSMUST00000180070 83 ntBASIC-0.74□□□□□ -2.53
H2afb1S4R1E0 Mir15b-201ENSMUST00000083646 64 ntBASIC-0.75□□□□□ -2.53
H2afb1S4R1E0 Mir494-201ENSMUST00000093632 85 ntBASIC-0.75□□□□□ -2.53
H2afb1S4R1E0 Gm24701-201ENSMUST00000101946 105 ntBASIC-0.76□□□□□ -2.53
H2afb1S4R1E0 Gm22679-201ENSMUST00000116975 100 ntBASIC-0.76□□□□□ -2.53
H2afb1S4R1E0 Gm27607-201ENSMUST00000185162 122 ntBASIC-0.76□□□□□ -2.53
H2afb1S4R1E0 Gm24793-201ENSMUST00000104289 132 ntBASIC-0.77□□□□□ -2.53
H2afb1S4R1E0 Mir1950-201ENSMUST00000158526 74 ntBASIC-0.78□□□□□ -2.53
H2afb1S4R1E0 Mir5124b-201ENSMUST00000184251 85 ntBASIC-0.78□□□□□ -2.53
H2afb1S4R1E0 Gm23376-201ENSMUST00000082938 160 ntBASIC-0.78□□□□□ -2.53
H2afb1S4R1E0 Gm25681-201ENSMUST00000083938 106 ntBASIC-0.78□□□□□ -2.53
H2afb1S4R1E0 Mir702-201ENSMUST00000102285 109 ntBASIC-0.79□□□□□ -2.54
H2afb1S4R1E0 Gm23856-201ENSMUST00000158380 99 ntBASIC-0.79□□□□□ -2.54
H2afb1S4R1E0 Mir7094-2-201ENSMUST00000184622 60 ntBASIC-0.79□□□□□ -2.54
H2afb1S4R1E0 Mir7094-1-201ENSMUST00000199671 60 ntBASIC-0.79□□□□□ -2.54
H2afb1S4R1E0 Gm22305-201ENSMUST00000082690 108 ntBASIC-0.8□□□□□ -2.54
H2afb1S4R1E0 Mir183-201ENSMUST00000083685 70 ntBASIC-0.8□□□□□ -2.54
H2afb1S4R1E0 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.81□□□□□ -2.54
H2afb1S4R1E0 Mir297-1-201ENSMUST00000103800 76 ntBASIC-0.81□□□□□ -2.54
H2afb1S4R1E0 Gm23607-201ENSMUST00000104550 126 ntBASIC-0.81□□□□□ -2.54
H2afb1S4R1E0 Gm23590-201ENSMUST00000157661 104 ntBASIC-0.81□□□□□ -2.54
H2afb1S4R1E0 Gm24495-201ENSMUST00000178575 79 ntBASIC-0.81□□□□□ -2.54
H2afb1S4R1E0 Gm22253-201ENSMUST00000179870 79 ntBASIC-0.81□□□□□ -2.54
H2afb1S4R1E0 Mir677-202ENSMUST00000197076 78 ntBASIC-0.81□□□□□ -2.54
Retrieved 100 of 76,532 protein–RNA pairs in 200.2 ms