Protein–RNA interactions for Protein: Q9JKU8

Lmx1a, LIM homeobox transcription factor 1-alpha, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1aQ9JKU8 Gm22255-201ENSMUST00000177933 79 ntBASIC-1.14□□□□□ -2.59
Lmx1aQ9JKU8 Gm25146-201ENSMUST00000177976 79 ntBASIC-1.14□□□□□ -2.59
Lmx1aQ9JKU8 Gm25523-201ENSMUST00000178044 79 ntBASIC-1.14□□□□□ -2.59
Lmx1aQ9JKU8 Gm24585-201ENSMUST00000178104 79 ntBASIC-1.14□□□□□ -2.59
Lmx1aQ9JKU8 Gm22627-201ENSMUST00000178127 79 ntBASIC-1.14□□□□□ -2.59
Lmx1aQ9JKU8 Gm22912-201ENSMUST00000178242 79 ntBASIC-1.14□□□□□ -2.59
Lmx1aQ9JKU8 Gm24866-201ENSMUST00000178338 79 ntBASIC-1.14□□□□□ -2.59
Lmx1aQ9JKU8 Gm22524-201ENSMUST00000178357 79 ntBASIC-1.14□□□□□ -2.59
Lmx1aQ9JKU8 Gm25710-201ENSMUST00000178367 79 ntBASIC-1.14□□□□□ -2.59
Lmx1aQ9JKU8 Gm23575-201ENSMUST00000178406 79 ntBASIC-1.14□□□□□ -2.59
Lmx1aQ9JKU8 Gm24872-201ENSMUST00000178434 79 ntBASIC-1.14□□□□□ -2.59
Lmx1aQ9JKU8 Gm22449-201ENSMUST00000178924 79 ntBASIC-1.14□□□□□ -2.59
Lmx1aQ9JKU8 Gm24702-201ENSMUST00000178965 79 ntBASIC-1.14□□□□□ -2.59
Lmx1aQ9JKU8 Gm24206-201ENSMUST00000179011 79 ntBASIC-1.14□□□□□ -2.59
Lmx1aQ9JKU8 Gm24528-201ENSMUST00000179164 79 ntBASIC-1.14□□□□□ -2.59
Lmx1aQ9JKU8 Gm22909-201ENSMUST00000179190 79 ntBASIC-1.14□□□□□ -2.59
Lmx1aQ9JKU8 Gm26334-201ENSMUST00000179403 79 ntBASIC-1.14□□□□□ -2.59
Lmx1aQ9JKU8 Gm25463-201ENSMUST00000179405 79 ntBASIC-1.14□□□□□ -2.59
Lmx1aQ9JKU8 Gm25742-201ENSMUST00000179530 79 ntBASIC-1.14□□□□□ -2.59
Lmx1aQ9JKU8 Gm25209-201ENSMUST00000179576 79 ntBASIC-1.14□□□□□ -2.59
Lmx1aQ9JKU8 Gm26392-201ENSMUST00000179661 79 ntBASIC-1.14□□□□□ -2.59
Lmx1aQ9JKU8 Gm25230-201ENSMUST00000179740 79 ntBASIC-1.14□□□□□ -2.59
Lmx1aQ9JKU8 Gm26434-201ENSMUST00000179778 79 ntBASIC-1.14□□□□□ -2.59
Lmx1aQ9JKU8 Gm25741-201ENSMUST00000179825 79 ntBASIC-1.14□□□□□ -2.59
Lmx1aQ9JKU8 Gm24759-201ENSMUST00000179827 79 ntBASIC-1.14□□□□□ -2.59
Lmx1aQ9JKU8 Gm24219-201ENSMUST00000179861 79 ntBASIC-1.14□□□□□ -2.59
Lmx1aQ9JKU8 n-R5s153-201ENSMUST00000083451 116 ntBASIC-1.14□□□□□ -2.59
Lmx1aQ9JKU8 Gm23254-201ENSMUST00000097244 79 ntBASIC-1.14□□□□□ -2.59
Lmx1aQ9JKU8 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.15□□□□□ -2.59
Lmx1aQ9JKU8 Gm22677-201ENSMUST00000116977 108 ntBASIC-1.15□□□□□ -2.59
Lmx1aQ9JKU8 Gm25229-201ENSMUST00000178587 79 ntBASIC-1.15□□□□□ -2.59
Lmx1aQ9JKU8 Gm22454-201ENSMUST00000082583 107 ntBASIC-1.15□□□□□ -2.59
Lmx1aQ9JKU8 Gm25652-201ENSMUST00000083780 103 ntBASIC-1.15□□□□□ -2.59
Lmx1aQ9JKU8 Gm25429-201ENSMUST00000157607 132 ntBASIC-1.16□□□□□ -2.6
Lmx1aQ9JKU8 Gm22384-201ENSMUST00000158187 104 ntBASIC-1.16□□□□□ -2.6
Lmx1aQ9JKU8 Gm22770-201ENSMUST00000158368 67 ntBASIC-1.16□□□□□ -2.6
Lmx1aQ9JKU8 Gm27415-201ENSMUST00000183720 95 ntBASIC-1.16□□□□□ -2.6
Lmx1aQ9JKU8 Gm25609-201ENSMUST00000104019 104 ntBASIC-1.17□□□□□ -2.6
Lmx1aQ9JKU8 Gm25322-201ENSMUST00000122556 104 ntBASIC-1.17□□□□□ -2.6
Lmx1aQ9JKU8 Gm25449-201ENSMUST00000179389 79 ntBASIC-1.17□□□□□ -2.6
Lmx1aQ9JKU8 Gm25641-201ENSMUST00000175135 108 ntBASIC-1.18□□□□□ -2.6
Lmx1aQ9JKU8 Mir466-201ENSMUST00000093591 73 ntBASIC-1.18□□□□□ -2.6
Lmx1aQ9JKU8 Gm26425-201ENSMUST00000122529 82 ntBASIC-1.19□□□□□ -2.6
Lmx1aQ9JKU8 Gm23044-201ENSMUST00000157891 100 ntBASIC-1.19□□□□□ -2.6
Lmx1aQ9JKU8 Gm25862-201ENSMUST00000158250 129 ntBASIC-1.19□□□□□ -2.6
Lmx1aQ9JKU8 Gm22016-201ENSMUST00000158793 114 ntBASIC-1.19□□□□□ -2.6
Lmx1aQ9JKU8 Snord57-201ENSMUST00000083338 72 ntBASIC-1.19□□□□□ -2.6
Lmx1aQ9JKU8 Gm22413-201ENSMUST00000175465 85 ntBASIC-1.2□□□□□ -2.6
Lmx1aQ9JKU8 Gm24099-201ENSMUST00000083384 107 ntBASIC-1.2□□□□□ -2.6
Lmx1aQ9JKU8 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-1.21□□□□□ -2.6
Lmx1aQ9JKU8 Gm22070-201ENSMUST00000178475 107 ntBASIC-1.21□□□□□ -2.6
Lmx1aQ9JKU8 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.23□□□□□ -2.61
Lmx1aQ9JKU8 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.23□□□□□ -2.61
Lmx1aQ9JKU8 Gm27975-201ENSMUST00000184400 101 ntBASIC-1.23□□□□□ -2.61
Lmx1aQ9JKU8 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.23□□□□□ -2.61
Lmx1aQ9JKU8 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-1.23□□□□□ -2.61
Lmx1aQ9JKU8 AC122335.1-201ENSMUST00000217587 175 ntBASIC-1.23□□□□□ -2.61
Lmx1aQ9JKU8 Gm24459-201ENSMUST00000082730 86 ntBASIC-1.23□□□□□ -2.61
Lmx1aQ9JKU8 Gm22828-201ENSMUST00000083768 107 ntBASIC-1.23□□□□□ -2.61
Lmx1aQ9JKU8 Gm24162-201ENSMUST00000093665 102 ntBASIC-1.23□□□□□ -2.61
Lmx1aQ9JKU8 Gm22605-201ENSMUST00000158289 108 ntBASIC-1.24□□□□□ -2.61
Lmx1aQ9JKU8 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC-1.24□□□□□ -2.61
Lmx1aQ9JKU8 Mir494-201ENSMUST00000093632 85 ntBASIC-1.24□□□□□ -2.61
Lmx1aQ9JKU8 Gm24400-201ENSMUST00000157865 107 ntBASIC-1.25□□□□□ -2.61
Lmx1aQ9JKU8 Gm25920-201ENSMUST00000158307 99 ntBASIC-1.25□□□□□ -2.61
Lmx1aQ9JKU8 Gm27554-201ENSMUST00000185074 98 ntBASIC-1.25□□□□□ -2.61
Lmx1aQ9JKU8 Gm25417-201ENSMUST00000104212 131 ntBASIC-1.26□□□□□ -2.61
Lmx1aQ9JKU8 Gm24637-201ENSMUST00000158674 85 ntBASIC-1.27□□□□□ -2.61
Lmx1aQ9JKU8 AL929417.1-201ENSMUST00000214901 124 ntBASIC-1.27□□□□□ -2.61
Lmx1aQ9JKU8 AC158537.2-201ENSMUST00000223575 150 ntBASIC-1.27□□□□□ -2.61
Lmx1aQ9JKU8 Gm25798-201ENSMUST00000082641 107 ntBASIC-1.27□□□□□ -2.61
Lmx1aQ9JKU8 Gm24612-201ENSMUST00000083267 107 ntBASIC-1.27□□□□□ -2.61
Lmx1aQ9JKU8 Gm25915-201ENSMUST00000104265 126 ntBASIC-1.28□□□□□ -2.61
Lmx1aQ9JKU8 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.28□□□□□ -2.61
Lmx1aQ9JKU8 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.28□□□□□ -2.61
Lmx1aQ9JKU8 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC-1.28□□□□□ -2.61
Lmx1aQ9JKU8 Gm22286-201ENSMUST00000179708 107 ntBASIC-1.28□□□□□ -2.61
Lmx1aQ9JKU8 mt-Tf-201ENSMUST00000082387 68 ntBASIC-1.28□□□□□ -2.61
Lmx1aQ9JKU8 Gm23369-201ENSMUST00000175406 105 ntBASIC-1.29□□□□□ -2.62
Lmx1aQ9JKU8 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.29□□□□□ -2.62
Lmx1aQ9JKU8 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.3□□□□□ -2.62
Lmx1aQ9JKU8 AC161271.1-201ENSMUST00000226914 150 ntBASIC-1.3□□□□□ -2.62
Lmx1aQ9JKU8 Gm23138-201ENSMUST00000083365 103 ntBASIC-1.3□□□□□ -2.62
Lmx1aQ9JKU8 Gm26104-201ENSMUST00000157250 108 ntBASIC-1.31□□□□□ -2.62
Lmx1aQ9JKU8 Gm23790-201ENSMUST00000083013 107 ntBASIC-1.31□□□□□ -2.62
Lmx1aQ9JKU8 Gm26441-201ENSMUST00000082590 104 ntBASIC-1.32□□□□□ -2.62
Lmx1aQ9JKU8 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.33□□□□□ -2.62
Lmx1aQ9JKU8 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.33□□□□□ -2.62
Lmx1aQ9JKU8 AC122327.1-201ENSMUST00000220778 108 ntBASIC-1.33□□□□□ -2.62
Lmx1aQ9JKU8 Gm24988-201ENSMUST00000104460 121 ntBASIC-1.34□□□□□ -2.62
Lmx1aQ9JKU8 Gm24946-201ENSMUST00000158332 106 ntBASIC-1.34□□□□□ -2.62
Lmx1aQ9JKU8 Gm23306-201ENSMUST00000179058 105 ntBASIC-1.34□□□□□ -2.62
Lmx1aQ9JKU8 Gm26466-201ENSMUST00000179615 79 ntBASIC-1.34□□□□□ -2.62
Lmx1aQ9JKU8 Gm25089-201ENSMUST00000102015 79 ntBASIC-1.35□□□□□ -2.63
Lmx1aQ9JKU8 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-1.35□□□□□ -2.63
Lmx1aQ9JKU8 Gm26253-201ENSMUST00000122493 103 ntBASIC-1.35□□□□□ -2.63
Lmx1aQ9JKU8 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.35□□□□□ -2.63
Lmx1aQ9JKU8 Gm24676-201ENSMUST00000158758 75 ntBASIC-1.35□□□□□ -2.63
Lmx1aQ9JKU8 Gm25840-201ENSMUST00000177821 79 ntBASIC-1.35□□□□□ -2.63
Lmx1aQ9JKU8 Gm24952-201ENSMUST00000177909 79 ntBASIC-1.35□□□□□ -2.63
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms