Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Mir183-201ENSMUST00000083685 70 ntBASIC-0.68□□□□□ -2.52
Ddx56Q9D0R4 Gm24377-201ENSMUST00000104398 131 ntBASIC-0.69□□□□□ -2.52
Ddx56Q9D0R4 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-0.69□□□□□ -2.52
Ddx56Q9D0R4 AC158537.2-201ENSMUST00000223575 150 ntBASIC-0.69□□□□□ -2.52
Ddx56Q9D0R4 AC167019.1-201ENSMUST00000227913 106 ntBASIC-0.69□□□□□ -2.52
Ddx56Q9D0R4 Gm22354-201ENSMUST00000083919 70 ntBASIC-0.69□□□□□ -2.52
Ddx56Q9D0R4 Gm25388-201ENSMUST00000157339 151 ntBASIC-0.7□□□□□ -2.52
Ddx56Q9D0R4 Gm22845-201ENSMUST00000157712 104 ntBASIC-0.7□□□□□ -2.52
Ddx56Q9D0R4 Gm22458-201ENSMUST00000082576 107 ntBASIC-0.7□□□□□ -2.52
Ddx56Q9D0R4 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.7□□□□□ -2.52
Ddx56Q9D0R4 Mir96-201ENSMUST00000083652 106 ntBASIC-0.7□□□□□ -2.52
Ddx56Q9D0R4 Gm23017-201ENSMUST00000177583 72 ntBASIC-0.71□□□□□ -2.52
Ddx56Q9D0R4 n-R5s8-201ENSMUST00000104121 118 ntBASIC-0.72□□□□□ -2.52
Ddx56Q9D0R4 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.72□□□□□ -2.52
Ddx56Q9D0R4 Gm24201-201ENSMUST00000082946 125 ntBASIC-0.72□□□□□ -2.52
Ddx56Q9D0R4 Gm24199-201ENSMUST00000157808 136 ntBASIC-0.73□□□□□ -2.53
Ddx56Q9D0R4 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.73□□□□□ -2.53
Ddx56Q9D0R4 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.73□□□□□ -2.53
Ddx56Q9D0R4 Gm27977-201ENSMUST00000185159 111 ntBASIC-0.74□□□□□ -2.53
Ddx56Q9D0R4 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-0.74□□□□□ -2.53
Ddx56Q9D0R4 Gm22729-201ENSMUST00000158088 129 ntBASIC-0.75□□□□□ -2.53
Ddx56Q9D0R4 Gm25440-201ENSMUST00000158279 154 ntBASIC-0.76□□□□□ -2.53
Ddx56Q9D0R4 Gm25641-201ENSMUST00000175135 108 ntBASIC-0.76□□□□□ -2.53
Ddx56Q9D0R4 Gm26499-201ENSMUST00000178544 79 ntBASIC-0.76□□□□□ -2.53
Ddx56Q9D0R4 Gm26096-201ENSMUST00000179084 79 ntBASIC-0.76□□□□□ -2.53
Ddx56Q9D0R4 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.76□□□□□ -2.53
Ddx56Q9D0R4 Gm22298-201ENSMUST00000082662 133 ntBASIC-0.76□□□□□ -2.53
Ddx56Q9D0R4 Gm45688-201ENSMUST00000210002 101 ntBASIC-0.77□□□□□ -2.53
Ddx56Q9D0R4 Gm25542-201ENSMUST00000116889 94 ntBASIC-0.78□□□□□ -2.53
Ddx56Q9D0R4 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.78□□□□□ -2.53
Ddx56Q9D0R4 Gm25798-201ENSMUST00000082641 107 ntBASIC-0.78□□□□□ -2.53
Ddx56Q9D0R4 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.78□□□□□ -2.53
Ddx56Q9D0R4 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.78□□□□□ -2.53
Ddx56Q9D0R4 Gm37832-201ENSMUST00000118935 189 ntBASIC-0.79□□□□□ -2.54
Ddx56Q9D0R4 Gm24650-201ENSMUST00000157105 103 ntBASIC-0.79□□□□□ -2.54
Ddx56Q9D0R4 Gm27554-201ENSMUST00000185074 98 ntBASIC-0.79□□□□□ -2.54
Ddx56Q9D0R4 Gm23306-201ENSMUST00000179058 105 ntBASIC-0.8□□□□□ -2.54
Ddx56Q9D0R4 Mir6904-201ENSMUST00000183443 67 ntBASIC-0.8□□□□□ -2.54
Ddx56Q9D0R4 Gm27735-201ENSMUST00000185085 76 ntBASIC-0.8□□□□□ -2.54
Ddx56Q9D0R4 Gm23197-201ENSMUST00000158809 112 ntBASIC-0.81□□□□□ -2.54
Ddx56Q9D0R4 Mir669m-1-201ENSMUST00000158945 98 ntBASIC-0.82□□□□□ -2.54
Ddx56Q9D0R4 Gm25644-201ENSMUST00000083209 107 ntBASIC-0.82□□□□□ -2.54
Ddx56Q9D0R4 Gm24336-201ENSMUST00000104203 146 ntBASIC-0.83□□□□□ -2.54
Ddx56Q9D0R4 Gm24971-201ENSMUST00000175581 110 ntBASIC-0.83□□□□□ -2.54
Ddx56Q9D0R4 Gm25740-201ENSMUST00000180247 107 ntBASIC-0.83□□□□□ -2.54
Ddx56Q9D0R4 Gm22827-201ENSMUST00000083766 107 ntBASIC-0.83□□□□□ -2.54
Ddx56Q9D0R4 Gm25854-201ENSMUST00000082792 72 ntBASIC-0.84□□□□□ -2.54
Ddx56Q9D0R4 Gm24381-201ENSMUST00000122697 104 ntBASIC-0.85□□□□□ -2.55
Ddx56Q9D0R4 Mir378c-201ENSMUST00000184478 99 ntBASIC-0.85□□□□□ -2.55
Ddx56Q9D0R4 Gm22595-201ENSMUST00000104250 130 ntBASIC-0.86□□□□□ -2.55
Ddx56Q9D0R4 Gm25061-201ENSMUST00000104665 107 ntBASIC-0.86□□□□□ -2.55
Ddx56Q9D0R4 Gm27784-201ENSMUST00000184926 113 ntBASIC-0.86□□□□□ -2.55
Ddx56Q9D0R4 Gm22454-201ENSMUST00000082583 107 ntBASIC-0.87□□□□□ -2.55
Ddx56Q9D0R4 Gm23955-201ENSMUST00000157214 100 ntBASIC-0.88□□□□□ -2.55
Ddx56Q9D0R4 Gm22335-201ENSMUST00000157724 99 ntBASIC-0.89□□□□□ -2.55
Ddx56Q9D0R4 Mir3101-201ENSMUST00000175607 88 ntBASIC-0.89□□□□□ -2.55
Ddx56Q9D0R4 Gm27610-201ENSMUST00000184026 74 ntBASIC-0.89□□□□□ -2.55
Ddx56Q9D0R4 Gm44481-201ENSMUST00000197288 84 ntBASIC-0.89□□□□□ -2.55
Ddx56Q9D0R4 Gm44339-201ENSMUST00000200598 84 ntBASIC-0.89□□□□□ -2.55
Ddx56Q9D0R4 Gm25417-201ENSMUST00000104212 131 ntBASIC-0.9□□□□□ -2.55
Ddx56Q9D0R4 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC-0.9□□□□□ -2.55
Ddx56Q9D0R4 Gm25112-201ENSMUST00000122680 104 ntBASIC-0.91□□□□□ -2.56
Ddx56Q9D0R4 Gm24988-201ENSMUST00000104460 121 ntBASIC-0.92□□□□□ -2.56
Ddx56Q9D0R4 Gm27415-201ENSMUST00000183720 95 ntBASIC-0.92□□□□□ -2.56
Ddx56Q9D0R4 Mir5124b-201ENSMUST00000184251 85 ntBASIC-0.92□□□□□ -2.56
Ddx56Q9D0R4 Gm6293-201ENSMUST00000050339 195 ntBASIC-0.92□□□□□ -2.56
Ddx56Q9D0R4 Mir18b-201ENSMUST00000103923 83 ntBASIC-0.93□□□□□ -2.56
Ddx56Q9D0R4 Gm11333-201ENSMUST00000119479 148 ntBASIC-0.93□□□□□ -2.56
Ddx56Q9D0R4 Gm24400-201ENSMUST00000157865 107 ntBASIC-0.94□□□□□ -2.56
Ddx56Q9D0R4 Gm24946-201ENSMUST00000158332 106 ntBASIC-0.94□□□□□ -2.56
Ddx56Q9D0R4 Gm22805-201ENSMUST00000082739 107 ntBASIC-0.94□□□□□ -2.56
Ddx56Q9D0R4 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-0.95□□□□□ -2.56
Ddx56Q9D0R4 Mir7043-201ENSMUST00000184219 70 ntBASIC-0.95□□□□□ -2.56
Ddx56Q9D0R4 Mir145b-201ENSMUST00000184434 75 ntBASIC-0.95□□□□□ -2.56
Ddx56Q9D0R4 Gm25879-201ENSMUST00000104330 107 ntBASIC-0.96□□□□□ -2.56
Ddx56Q9D0R4 Gm23652-201ENSMUST00000116752 107 ntBASIC-0.96□□□□□ -2.56
Ddx56Q9D0R4 Gm42773-201ENSMUST00000196962 148 ntBASIC-0.96□□□□□ -2.56
Ddx56Q9D0R4 Gm22429-201ENSMUST00000158553 130 ntBASIC-0.97□□□□□ -2.56
Ddx56Q9D0R4 Gm22234-201ENSMUST00000174906 65 ntBASIC-0.97□□□□□ -2.56
Ddx56Q9D0R4 Mir876-201ENSMUST00000104659 81 ntBASIC-0.98□□□□□ -2.57
Ddx56Q9D0R4 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-0.98□□□□□ -2.57
Ddx56Q9D0R4 Gm24674-201ENSMUST00000179194 104 ntBASIC-0.98□□□□□ -2.57
Ddx56Q9D0R4 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-0.98□□□□□ -2.57
Ddx56Q9D0R4 Gm25108-201ENSMUST00000122473 78 ntBASIC-0.99□□□□□ -2.57
Ddx56Q9D0R4 Mir7094-2-201ENSMUST00000184622 60 ntBASIC-0.99□□□□□ -2.57
Ddx56Q9D0R4 Mir7094-1-201ENSMUST00000199671 60 ntBASIC-0.99□□□□□ -2.57
Ddx56Q9D0R4 Gm24372-201ENSMUST00000104400 110 ntBASIC-1□□□□□ -2.57
Ddx56Q9D0R4 Gm22813-202ENSMUST00000200346 124 ntBASIC-1.01□□□□□ -2.57
Ddx56Q9D0R4 Gm23570-201ENSMUST00000083029 104 ntBASIC-1.01□□□□□ -2.57
Ddx56Q9D0R4 Gm22539-201ENSMUST00000158167 117 ntBASIC-1.02□□□□□ -2.57
Ddx56Q9D0R4 Mir574-201ENSMUST00000103854 78 ntBASIC-1.03□□□□□ -2.57
Ddx56Q9D0R4 Gm23173-201ENSMUST00000157161 160 ntBASIC-1.03□□□□□ -2.57
Ddx56Q9D0R4 Gm44311-201ENSMUST00000196448 69 ntBASIC-1.03□□□□□ -2.57
Ddx56Q9D0R4 CT571266.1-201ENSMUST00000222859 153 ntBASIC-1.03□□□□□ -2.57
Ddx56Q9D0R4 Gm23607-201ENSMUST00000104550 126 ntBASIC-1.05□□□□□ -2.58
Ddx56Q9D0R4 Gm22489-201ENSMUST00000116813 62 ntBASIC-1.05□□□□□ -2.58
Ddx56Q9D0R4 Gm27798-201ENSMUST00000184989 71 ntBASIC-1.05□□□□□ -2.58
Ddx56Q9D0R4 Mir677-202ENSMUST00000197076 78 ntBASIC-1.05□□□□□ -2.58
Ddx56Q9D0R4 Gm22251-201ENSMUST00000083216 107 ntBASIC-1.05□□□□□ -2.58
Ddx56Q9D0R4 Gm25431-201ENSMUST00000101978 107 ntBASIC-1.06□□□□□ -2.58
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms